LOCUS AJ245922 2018 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for alpha-tubulin 8 (TUBA8 gene).
ACCESSION AJ245922
VERSION AJ245922.1
KEYWORDS alpha-tubulin 8; TUBA8 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2018)
AUTHORS Stanchi F.
JOURNAL Submitted (26-AUG-1999) to the INSDC. Stanchi F., CRIBI
Biotechnology Centre, Universita' di Padova, Via G. Colombo 3,
Padova, 35121, ITALY.
REFERENCE 2
AUTHORS Stanchi F., Corso V., Scannapieco P., Ievolella C., Negrisolo E.,
Tiso N., Lanfranchi G., Valle G.
TITLE TUBA8: A new tissue-specific isoform of alpha-tubulin that is
highly conserved in human and mouse
JOURNAL Biochem. Biophys. Res. Commun. 270(3), 1111-1118(2000).
PUBMED 10772959
FEATURES Location/Qualifiers
source 1..2018
/db_xref="H-InvDB:HIT000245906"
/organism="Homo sapiens"
/chromosome="22"
/map="22q11"
/mol_type="mRNA"
/dev_stage="adult"
/tissue_type="skeletal muscle"
/db_xref="taxon:9606"
exon 1..76
/gene="TUBA8"
/number=1
CDS 74..1423
/gene="TUBA8"
/product="alpha-tubulin 8"
/db_xref="GOA:Q9NY65"
/db_xref="H-InvDB:HIT000245906.14"
/db_xref="HGNC:HGNC:12410"
/db_xref="InterPro:IPR000217"
/db_xref="InterPro:IPR002452"
/db_xref="InterPro:IPR003008"
/db_xref="InterPro:IPR008280"
/db_xref="InterPro:IPR017975"
/db_xref="InterPro:IPR018316"
/db_xref="InterPro:IPR023123"
/db_xref="InterPro:IPR036525"
/db_xref="InterPro:IPR037103"
/db_xref="UniProtKB/Swiss-Prot:Q9NY65"
/protein_id="CAB88036.1"
/translation="MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKIN
DDDSFTTFFSETGNGKHVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANN
YARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLD
YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPII
SAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAA
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEGEEF"
exon 77..299
/gene="TUBA8"
/number=2
exon 300..448
/gene="TUBA8"
/number=3
exon 449..1129
/gene="TUBA8"
/number=4
exon 1130..1440
/gene="TUBA8"
/note="number 5, short"
exon 1130..2017
/gene="TUBA8"
/note="number 5, long"
polyA_site 1441
/gene="TUBA8"
polyA_site 2018
/gene="TUBA8"
BASE COUNT 463 a 568 c 570 g 417 t
ORIGIN
1 aggcggctgt atctggagca gtcggggcgg gcaggcccag ctgagaggtg cgcgggcgag
61 gacagcggca gcgatgcggg aatgcatatc agtccacgtg ggccaagcgg gagttcagat
121 tggcaatgcc tgctgggagc tcttctgcct ggaacacggc atccaggcag acggcacttt
181 tgatgctcaa gctagcaaga tcaacgatga tgactccttc accacctttt tcagcgagac
241 tggcaatggg aagcatgtgc cccgggccgt catgatagat ctggagccta ctgtagtgga
301 tgaggttcgg gcaggaacct accgccagct cttccatcca gagcagctga tcacaggaaa
361 ggaggatgca gccaacaact atgcccgggg ccactacacg gtgggcaagg agagcattga
421 cctggtgctg gaccgcatac ggaagctgac agatgcttgc tctggcctgc agggcttcct
481 gattttccac agttttggtg ggggcactgg ctccggcttc acttctctgc tgatggaacg
541 cctctccctg gattatggca agaaatccaa gctggagttt gccatctacc cagcccccca
601 ggtctctact gcagtggtgg agccctacaa ctccatcctg accacccaca ccacactgga
661 acattcagat tgtgctttca tggtggacaa cgaagccatc tatgacatct gccgcaggaa
721 ccttgacatt gagcgcccta cctataccaa cctcaaccgc ctcatcagtc agattgtgtc
781 ctcaatcact gcttctctcc gctttgacgg ggccctcaat gtggacctca ctgagttcca
841 gaccaacctg gtgccctacc cccgcatcca cttcccgctg gtcacctacg cgcccatcat
901 ctctgccgag aaagcctatc acgaacagct ctctgtggcc gagataacca gctcctgctt
961 tgagcccaac agccagatgg tgaagtgcga cccgagacat ggcaagtaca tggcctgctg
1021 catgctctac cggggcgacg tggtgcccaa ggatgtgaat gtcgctattg ctgccatcaa
1081 gaccaagagg accatccagt ttgtagactg gtgtcccaca ggcttcaagg tgggcatcaa
1141 ctaccagccc ccgaccgtgg tccccggggg agacctggcc aaggtgcagc gggccgtctg
1201 catgctcagc aacaccacgg ccattgcgga ggcctgggcc cgcctcgacc acaagttcga
1261 cctcatgtac gccaagcggg cctttgtgca ttggtatgtg ggagagggga tggaagaagg
1321 agaattttct gaggccaggg aagacttagc tgccctggag aaggattatg aagaagtggg
1381 gactgattcg tttgaagaag aaaatgaagg ggaggaattt taaatatata ccttcccctt
1441 ggctgtgtct ctttatttat gctgtgccat tcaaagcaca tgttcaagag aacagaacac
1501 tctccccgcc ccagcctgat tcctgcctta cccaggagga gggtgcctgg ccccagtacc
1561 cagggtggca cgactgggct aagtggacac tgagcttcat caggccctcc ctgggtagga
1621 gcagctttgt gtcactaaag aaagtgaggg ccactgtctc cggcgggtga ggctgcagcc
1681 cagtttcaca tgcgaggagg cctaatcagg agtttcaatt ccagatcggg ctgggtccag
1741 ccccaaaaca tggcctgctg gctggggagt gggaacactc agagaaaggg gagatctggg
1801 cctgggaaga ttccggggca ggggtgagcg gacgttcaca tgagtgggtc tatagcccgc
1861 tccgggcatc atctagactt agcatgcatt cactccccca tcacatattc caatacacac
1921 cctgccctag gcactgagag ctggagagtt ggtgataagc gagacgaaca catttcctgc
1981 cctcatacac acataaataa agtgaatgag atcatgtc
//