LOCUS AJ242832 2338 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for calpain.
ACCESSION AJ242832
VERSION AJ242832.1
KEYWORDS calpain; CAPN11 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2338)
AUTHORS Dear T.N.
JOURNAL Submitted (02-JUN-1999) to the INSDC. Dear T.N., Development of the
Immune System, Max-Planck Institute for Immunobiology, Stuebeweg
51, 79108 Freiburg, GERMANY.
REFERENCE 2
AUTHORS Dear T.N., Moller A., Boehm T.
TITLE CAPN11: A calpain with high mRNA levels in testis and located on
chromosome 6
JOURNAL Genomics 59(2), 243-247(1999).
PUBMED 10409436
FEATURES Location/Qualifiers
source 1..2338
/db_xref="H-InvDB:HIT000245488"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 104..2212
/gene="CAPN11"
/product="calpain"
/function="protease"
/db_xref="GOA:Q9UMQ6"
/db_xref="H-InvDB:HIT000245488.14"
/db_xref="HGNC:HGNC:1478"
/db_xref="InterPro:IPR000169"
/db_xref="InterPro:IPR001300"
/db_xref="InterPro:IPR002048"
/db_xref="InterPro:IPR011992"
/db_xref="InterPro:IPR018247"
/db_xref="InterPro:IPR022682"
/db_xref="InterPro:IPR022683"
/db_xref="InterPro:IPR022684"
/db_xref="InterPro:IPR033883"
/db_xref="InterPro:IPR036213"
/db_xref="InterPro:IPR038765"
/db_xref="UniProtKB/Swiss-Prot:Q9UMQ6"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAB52137.1"
/translation="MVAHINNSRLKAKGVGQHDNAQNFGNQSFEELRAACLRKGELFE
DPLFPAEPSSLGFKDLGPNSKNVQNISWQRPKDIINNPLFIMDGISPTDICQGILGDC
WLLAAIGSLTTCPKLLYRVVPRGQSFKKNYAGIFHFQIWQFGQWVNVVVDDRLPTKND
KLVFVHSTERSEFWSALLEKAYAKLSGSYEALSGGSTMEGLEDFTGGVAQSFQLQRPP
QNLLRLLRKAVERSSLMGCSIEVTSDSELESMTDKMLVRGHAYSVTGLQDVHYRGKME
TLIRVRNPWGRIEWNGAWSDSAREWEEVASDIQMQLLHKTEDGEFWMSYQDFLNNFTL
LEICNLTPDTLSGDYKSYWHTTFYEGSWRRGSSAGGCRNHPGTFWTNPQFKISLPEGD
DPEDDAEGNVVVCTCLVALMQKNWRHARQQGAQLQTIGFVLYAVPKEFQNIQDVHLKK
EFFTKYQDHGFSEIFTNSREVSSQLRLPPGEYIIIPSTFEPHRDADFLLRVFTEKHSE
SWELDEVNYAEQLQEEKVSEDDMDQDFLHLFKIVAGEGKEIGVYELQRLLNRMAIKFK
SFKTKGFGLDACRCMINLMDKDGSGKLGLLEFKILWKKLKKWMDIFRECDQDHSGTLN
SYEMRLVIEKAGIKLNNKVMQVLVARYADDDLIIDFDSFISCFLRLKTMFTFFLTMDP
KNTGHICLSLEQWLQMTMWG"
BASE COUNT 578 a 600 c 671 g 489 t
ORIGIN
1 ctccccaggg ccgagtcttc cggagtcagc agagagcctg gatggatcac aggaggataa
61 gcctcggggc tcatgtgcgg agcccacttt tactgatacg ggaatggtgg ctcacataaa
121 caacagccgg ctcaaggcca agggcgtggg ccagcacgac aacgcccaga actttggtaa
181 ccagagcttt gaggagctgc gagcagcctg tctaagaaag ggggagctct tcgaggaccc
241 cttattccct gctgaaccca gctcactggg cttcaaggac ctgggcccca actccaaaaa
301 tgtgcagaac atctcctggc agcggcccaa ggatatcata aacaaccctc tattcatcat
361 ggatgggatt tctccaacag acatctgcca ggggatcctc ggggactgct ggctgctggc
421 tgccatcggc tcccttacca cctgccccaa actgctatac cgcgtggtgc ccagaggaca
481 gagcttcaag aaaaactatg ctggcatctt ccattttcag atttggcagt ttggacagtg
541 ggtgaacgtg gtggtagatg accggctgcc cacaaagaat gacaagctgg tgtttgtgca
601 ctcaaccgaa cgcagtgagt tctggagtgc cctgctggag aaggcgtatg ccaagctgag
661 tgggtcctat gaagcattgt cagggggcag taccatggag ggccttgagg acttcacagg
721 aggcgtggcc cagagcttcc aactccagag gccccctcag aacctgctca ggctccttag
781 gaaggccgtg gagcgatcct ccctcatggg ttgctccatt gaagtcacca gtgatagtga
841 actggaatcc atgactgaca agatgctggt gagagggcac gcttactctg tgactggcct
901 tcaggatgtc cactacagag gcaaaatgga aacactgatt cgggtccgga atccctgggg
961 ccggattgag tggaatggag cttggagtga cagtgccagg gagtgggaag aggtggcctc
1021 agacatccag atgcagctgc tgcacaagac ggaggacggg gagttctgga tgtcctacca
1081 agatttcctg aacaacttca cgctcctgga gatctgcaac ctcacgcctg atacactctc
1141 tggggactac aagagctact ggcacaccac cttctacgag ggcagctggc gcagaggcag
1201 ctccgcaggg ggctgcagga accaccctgg cacgttctgg accaaccccc agtttaagat
1261 ctctcttcct gagggggatg acccagagga tgacgcagag ggcaatgttg tggtctgcac
1321 ctgcctggtg gccctaatgc agaagaactg gcggcatgca cggcagcagg gagcccagct
1381 gcagaccatt ggctttgtcc tctacgcggt cccaaaagag tttcagaaca ttcaggatgt
1441 ccacttgaag aaggaattct tcacgaagta tcaggaccac ggcttctcag agatcttcac
1501 caactcacgg gaggtgagca gccaactccg gctgcctccg ggggaatata tcattattcc
1561 ctccaccttt gagccacaca gagatgctga cttcctgctt cgggtcttca ccgagaagca
1621 cagcgagtca tgggaattgg atgaagtcaa ctatgctgag caactccaag aggaaaaggt
1681 ctctgaggat gacatggacc aggacttcct acatttgttt aagatagtgg caggagaggg
1741 caaggagata ggggtgtatg agctccagag gctgctcaac aggatggcca tcaaattcaa
1801 aagcttcaag accaagggct ttggcctgga tgcttgccgc tgcatgatca acctcatgga
1861 taaagatggc tctggcaagc tggggcttct agagttcaag atcctgtgga aaaaactcaa
1921 gaaatggatg gacatcttca gagagtgtga ccaggaccat tcaggcacct tgaactccta
1981 tgagatgcgc ctggttattg agaaagcagg catcaagctg aacaacaagg taatgcaggt
2041 cctggtggcc aggtatgcag atgatgacct gatcatagac tttgacagct tcatcagctg
2101 tttcctgagg ctaaagacca tgttcacatt ctttctaacc atggacccca agaatactgg
2161 ccatatttgc ttgagcctgg aacagtggct gcagatgacc atgtggggat agaggcgctg
2221 taggagcctg gtcatctcta ccagcagcag cagcagcgag gttctagccc aggagggtgg
2281 ggtgcttctt gtagccctca gctctccagt ctctgctgat gaaatgggat ccaggtgg
//