LOCUS AJ242655 3236 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for a putative intermediate filaments interacting
protein.
ACCESSION AJ242655
VERSION AJ242655.2
KEYWORDS intermediate filaments interacting protein; ORF1.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS de Bernard M.
JOURNAL Submitted (27-MAY-1999) to the INSDC. de Bernard M., Scienze
Biomediche Sperimentali, Universita di Padova, Via G. Colombo 3,
Padova, 35100, ITALY.
REMARK Revised by [3]
REFERENCE 2
AUTHORS de Bernard M., Moschioni M., Napolitani G., Rappuoli R.,
Montecucco C.
TITLE The VacA toxin of Helicobacter pylori identifies a new intermediate
filament-interacting protein
JOURNAL EMBO J. 19(1), 48-56(2000).
PUBMED 10619843
REFERENCE 3 (bases 1 to 3236)
AUTHORS de Bernard M.
JOURNAL Submitted (26-SEP-2000) to the INSDC. de Bernard M., Scienze
Biomediche Sperimentali, Universita di Padova, Via G. Colombo 3,
Padova, 35100, ITALY.
FEATURES Location/Qualifiers
source 1..3236
/db_xref="H-InvDB:HIT000245478"
/organism="Homo sapiens"
/mol_type="mRNA"
/cell_line="HeLa"
/cell_type="epitheloid carcinoma"
/tissue_type="cervix"
/db_xref="taxon:9606"
CDS 95..2263
/product="putative intermediate filaments interacting
protein"
/note="ORF1"
/db_xref="GOA:Q9NZQ3"
/db_xref="H-InvDB:HIT000245478.14"
/db_xref="HGNC:HGNC:15486"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR018556"
/db_xref="InterPro:IPR035514"
/db_xref="InterPro:IPR036028"
/db_xref="PDB:6DEC"
/db_xref="PDB:6DED"
/db_xref="PDB:6DEE"
/db_xref="UniProtKB/Swiss-Prot:Q9NZQ3"
/protein_id="CAB65089.2"
/translation="MYRALYAFRSAEPNALAFAAGETFLVLERSSAHWWLAARARSGE
TGYVPPAYLRRLQGLEQDVLQAIDRAIEAVHNTAMRDGGKYSLEQRGVLQKLIHHRKE
TLSRRGPSASSVAVMTSSTSDHHLDAAAARQPNGVCRAGFERQHSLPSSEHLGADGGL
YQIPLPSSQIPPQPRRAAPTTPPPPVKRRDREALMASGSGGHNTMPSGGNSVSSGSSV
SSTSLDTLYTSSSPSEPGSSCSPTPPPVPRRGTHTTVSQVQPPPSKASAPEPPAEEEV
ATGTTSASDDLEALGTLSLGTTEEKAAAEAAVPRTIGAELMELVRRNTGLSHELCRVA
IGIIVGHIQASVPASSPVMEQVLLSLVEGKDLSMALPSGQVCHDQQRLEVIFADLARR
KDDAQQRSWALYEDEGVIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQM
EHRASLRLLLLKCFGAMCSLDAAIISTLVSSVLPVELARDMQTDTQDHQKLCYSALIL
AMVFSMGEAVPYAHYEHLGTPFAQFLLNIVEDGLPLDTTEQLPDLCVNLLLALNLHLP
AADQNVIMAALSKHANVKIFSEKLLLLLNRGDDPVRIFKHEPQPPHSVLKFLQDVFGS
PATAAIFYHTDMMALIDITVRHIADLSPGDKGPFGAGQRPWPGVPRLLEPGSTPSREP
HPVERSGVPALTSSWASGCPRPLHPALQLVIDSAFGGRSV"
BASE COUNT 672 a 1043 c 961 g 560 t
ORIGIN
1 ggcgggacaa ccgcggcgcg gctcggcgct cccggcctgg cgttgtggcg ccgcagccct
61 tgccaccttc cctgcacctg ccctgcccgg cctcatgtac cgcgcgctgt acgcgttccg
121 ctcggcggag cccaacgcgc tggcgttcgc cgcgggcgag accttcctgg tgctagagcg
181 aagcagcgcg cactggtggc tggccgcgcg ggcgcgcagt ggtgagacgg gctacgtgcc
241 gccagcctac ctgcgccgcc tgcagggcct ggagcaggat gtcctccagg ccattgaccg
301 ggccatcgag gctgtacaca acacagccat gcgggatggt ggcaagtaca gcctggaaca
361 gcgtggagtc ctccagaagc tgatccacca ccggaaagag accctgtcac gcagaggccc
421 ttcagcctcc agtgttgcag ttatgacctc atcaaccagt gaccaccact tggatgctgc
481 tgcagccagg cagcccaatg gggtgtgtcg agctgggttc gagcggcagc acagcctacc
541 cagttctgag catcttgggg cagatggagg cctctaccag atcccacttc catcttccca
601 gatcccacca cagcctcgcc gagcagcacc caccacaccg cccccaccag tgaagcgccg
661 agaccgcgag gccctgatgg cctctgggag tggtggccac aacaccatgc cctccggggg
721 taactctgtg tccagcggct cctcagtcag cagcacctcc ctggacacgc tctataccag
781 ctccagccca tctgaaccag gctccagctg ctcacccaca cccccacctg tgccccgccg
841 aggcacccac accaccgtgt cccaagtcca gccccctccc tccaaggcat cagcacctga
901 accccctgca gaagaagaag tggcaactgg tacaacctca gcctctgatg acctggaagc
961 cctgggtaca ctgagcctgg ggaccacaga ggagaaggca gcagctgagg cggctgtgcc
1021 caggaccatt ggggccgagc tgatggagct ggtgcggaga aacactggcc tgagccacga
1081 attatgccgg gtggccatcg gcatcatagt gggtcacatc caggcctcgg tgccggccag
1141 ctcaccagtc atggagcagg tcctcctctc actcgtagag ggcaaggacc tcagcatggc
1201 cctgccctca gggcaggtct gccacgacca gcagaggctg gaggtgatct ttgcagacct
1261 ggctcgccgg aaggacgacg cccagcagcg cagttgggca ctatatgagg atgagggtgt
1321 catccgctgc tacctagagg agctgctgca tattctgact gatgcagacc ctgaagtttg
1381 caagaaaatg tgcaagagaa acgagttcga gtctgtcctg gccttggtgg cctattacca
1441 aatggaacac cgagcatcac tgcggctgct gctcctcaag tgctttggcg ccatgtgcag
1501 cctggatgca gccatcatct ccacgcttgt gtcatccgtg ctgcctgtag agctggcgag
1561 ggacatgcag acagacacgc aggaccacca gaaactctgt tactctgccc tcatcctggc
1621 catggtcttc tccatgggag aggcagtgcc ctatgcacac tatgagcacc tgggcacgcc
1681 tttcgcccag ttcctactga acatcgtcga ggatgggctg cccttggaca ccacagagca
1741 gctgccggac ctctgcgtga acctgcttct ggctctcaac ctgcacctgc cagctgctga
1801 ccagaatgtc atcatggctg ccctgagcaa acacgccaat gtcaagatct tctccgagaa
1861 gctgttgttg ctcctgaaca gaggggatga ccctgtgcgc atcttcaaac atgagccaca
1921 gccaccacac tctgtcctca agttcctgca ggacgtgttt ggcagcccgg ccacagctgc
1981 catcttctac cacacagaca tgatggctct cattgacatc actgtgcggc acatcgcaga
2041 cctgtcacca ggagacaagg gaccgttcgg ggcgggccag aggccttggc caggagttcc
2101 tcgcctgtta gaaccaggat ccaccccatc gcgggagccg caccctgtgg agcgttctgg
2161 ggtcccggcc ctgacctctt cctgggcttc gggatgcccg cgtcctctgc acccggcgct
2221 gcagctcgtt atcgattccg cctttggagg ccggtccgta tagtgtacct cccggactct
2281 ctcacggtta gccggcaacc cgcggagccc cctcccccat gcgatgagtc cgccgtgagg
2341 ggcggggcct cccattgtgc caatagaaac aatgactgac cgattggagt gctccgcgtt
2401 cacccctcgc ctccgctcct ctcgtgacgt ctgttgcgcc aggtccaccc attggcctgg
2461 cgagaccggc gcgtgccagg agttacgcag ggagagctgg aatgcaccga gggtgggggg
2521 aggactgagt ttctgtgtca gtcccttcaa ggggttaagg catgcggtcg tgacggacga
2581 ggggcgggga cccgaagaag cggggcccgc agccatgggg caacgccggg ctccacgtgg
2641 catcccagag cactcgggac tcgcagcctg ggagggggtg cagcctccag tgaaggggcc
2701 ccgagcccgg gagactgctg gggaccagca aggcagggaa gaatttggcc tctgctcccg
2761 cctcgggagg gtcatctctg gtccctgctc cgcaggggcg atccaaacaa gcaggtggtc
2821 gcgacatgtt tcataaaact agctgatggg atagttaaag ctattgttcg gggtgctggc
2881 accccagacc cctctccagc catcgtcccc tctaccccag gatttcacac agtaccccct
2941 cccagagcta tgagaacgct catgggcacc aaaatttcag accaaaatcc gggacacggt
3001 tcagaactag tggtcaggaa gggggaacaa gagatctgga aggacagaaa aaggctggga
3061 gacggagctg ggacagcgcc ctagaaggag ggaggtgggt gaaggcggcg accgaaagtg
3121 gggagggcgg acccaacgac ggcgaacctt cgcgctctgt tcagcaccag gagcaacgct
3181 cacgtcctca ataaagatgg cggcaacaca aaaaaaaaaa aaaaaaaaaa aaaaaa
//