LOCUS AJ238520 7207 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for putative transcription factor-like nuclear
regulator (TFNR gene).
ACCESSION AJ238520
VERSION AJ238520.2
KEYWORDS nuclear; regulator; TFNR gene; transcription factor.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Wirth B.
JOURNAL Submitted (27-APR-1999) to the INSDC. Wirth B., Molecular Genetics,
Institute of Human Genetics, Wilhelmstrasse 31, 53111, GERMANY.
REMARK Revised by [3]
REFERENCE 3 (bases 1 to 7207)
AUTHORS Kelter A.R.
JOURNAL Submitted (21-AUG-2000) to the INSDC. Kelter A.R., Molecular
Genetics, Institute of Human Genetics, Wilhelmstrasse 31, 53111
Bonn, GERMANY.
REFERENCE 4
AUTHORS Kelter A.R., Herchenbach J., Wirth B.
TITLE The transcription factor-like nuclear regulator (TFNR) contains a
novel 55-amino-acid motif repeated nine times and maps closely to
SMN1
JOURNAL Genomics 70(3), 315-326(2000).
PUBMED 11161782
FEATURES Location/Qualifiers
source 1..7207
/db_xref="H-InvDB:HIT000245258_01"
/organism="Homo sapiens"
/chromosome="5"
/map="5q13"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 205..6969
/gene="TFNR"
/product="putative transcription factor-like nuclear
regulator"
/function="transcription regulation"
/db_xref="GOA:A6H8Y1"
/db_xref="H-InvDB:HIT000245258_01.10"
/db_xref="HGNC:HGNC:13652"
/db_xref="InterPro:IPR001005"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR039467"
/db_xref="PDB:5N9G"
/db_xref="UniProtKB/Swiss-Prot:A6H8Y1"
/protein_id="CAC04245.1"
/translation="MFRRARLSVKPNVRPGVGARGSTASNPQRGRESPRPPEPATDSA
SKPAEPTDVPTVDFGGAEPQEKAPRSSTEKTGGDNDVEESSRSSSTVSQRRKRISSTS
SLVKSSVSVPSESHPLSTINQEAPQPTATSTKEKQPCSDRYRIYKAQKLREMLKEELR
KEKKQWKNKYAINESQRPPDRSKMTMRDFIYYLPDNNPMTSSLEQEKKTEKPSTPVQT
REQEGKSTPNAEDNEMEEETDDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVV
EENDPIFERGSTTTYSSFRKNYYSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRAR
IEIKNKFKREEKTNGWRIDKAFQEKRPFDFDFFAHLLQKVLAEEEKRKQKSVKNHSLK
EKKSTKPRKNVKVKKVACEGVNNDPDESMSSRISDTERSQKDAQTVEEESLTLSREDA
EQVALEVDLNQKKRRRKKQDGANELGVNNLLENATVQAGPSKGEKHKNKCQAIRPELK
EGECSKEQMLSCTQNIDGIVGFASTEKVEKRTDPILSLSNQQDATSVATESSESSTSD
LPSFEVGIRALCEVNNAEGSCIEERNVDLKNNSLEIDQTENVKPMLRGRFQRPKPNLS
RAGKKSVLSQGKTESESKNSHSKTSVEKNHVEKDKMNTLDILRMETTERENPEAETVS
VLGEKNCLQEGSQLKALRPVQVRGRLQKPKPNAGKAAERKEILISQEEIGANVEKNEN
ESCADRDTPQHMEDQSRKDFEEEDVILQPEKNDSFQNVQPDEPKVLNECLSVQENNKA
NKLNQVPILRTRFQKPKPNIGRGTGRREISSKEEVLEKILVSGEMAAALRETVRLDTS
PKEMVPAEINTKEMQSDLKETGRRAISPREKILDVIDDTIEMETGLKAMGREICLREK
TPEVIDATEEIDKDLEEAGRREISPQKNGPEEVKPLGEVETDLKATGNESSPREKTPE
GTDATEEIDKNLEETGRRKISPRENGPEEVKPVDEMETDLNATGRESSPREKTPEVID
ATEEIDLEETEREVSPQENGLEEVKPLGEMETDLKATGRDSFPRGKTPEVIDAIEEIE
IDLEETEREISPQENGLEEVKPLGEMQTDLKATGREISPREKTPEVIDATEEIDKDLE
ETGRREISPEENGPEEVKPVDEMETDLKTTGREGSSREKTREVIDAAEVIETDLEETE
REISPQENGPEEVKPVGKMETDLKEIREEISQREKVLAEFSAIREKEIDLKETGKRDI
PIMEKVSGKMAVVEEMEADLKETGKENFRERGSEEICVTEEKVAELKQTGKTDISPRE
NELEETSTSRQTDTHLMQSGSNDFSAMPSLDIQNISSEVLSMMHTPVEEKRNSEKEVS
SHFSHFKISSQTHESDKTEVQGIQSPDVPEQFSDINLSKSLPQEQKPLEIKPAPFVRS
RFKRPKPNLARAALKRETTESEKYIYEKKSETKKMETIVMQENNEQTDTLPSQHDEAS
LMISREKDTLGHRNEEAVILPCTQTERNLSPSNSCEPKEESQSAPVQKNDSVVSVGTN
NVNTFQQEMKESVIQTARQVRGRLQRPRPNIRKTGQRQIVDKGEAKGIIKEGRTILPK
DETEKKVLTVSNSQIETEIEVPSSAVPEHRMYENQSQVVLVENLHVNKTNETIRHENK
PYVPSSAQMTRRKFQKAKPNLGRAHSKKEEPVLEKVTTDQSKEGKPEDHLLQKGASNT
QLLLKEKAELLTSLEVSARKDCVGSKESALAKIDAELEEVGPSRRVGEETVGDNSPSS
VVEEQYLNKLTSCPQPLNETSYSKIALDGKTTISSTSEYERNRGERRSHKKFKPNVTR
GRGSKRVRGKTSKKEPRASKAMLVTLRASQEEDDDADDFESDYEEESYHLAPEEVNKA
PVFVPVGLRSPEPVSAQIEETMEELEITVNVPDVGCIAVVEHELPNTDVTTEEMKQEE
NLSVPFEMTTSEHIQDEPGTNDGSTEAAITLLTMGDLVLQSEISSEQGDVGVCILPHV
HSKDKSHIPSSLDNVNHKIVHECQELSSPVITTSPASFEENKIVLEEQSSREEISLME
KVKENATPTRNTISKVTSNLRIRSRLAKPKPNLEKTLGTNRLDDYQEVSSLCVTKGAE
METQRETEKNASKATELENKNLGPVTTAENKDQSKLACVHGIKGTSISSEVNLTERNE
NQEESSQEVHMLSVAPVASSETGPCTLGLDRGLGENSVEEPQIKDSKGDSVLTLPVPE
VKECTV"
BASE COUNT 2640 a 1278 c 1728 g 1561 t
ORIGIN
1 ggccgcgtcg accatgaaaa agcggcggcg gcgggagaga ggaggaggcg gcggcggggc
61 agtgaaacta cggtagctgc cccctgagct ggtggtgtgg ctttgtgggg agggcgtagt
121 tcctaatccc ctttccgggc agccgccggg gctcggggct gtgagcggcc gtgaggctgc
181 ctccccgggc cccctgcctc cgccatgttc cgcagggcac gccttagcgt gaagccgaat
241 gtcaggcctg gtgtaggcgc caggggctcc acagcttcca atccccagcg tggacgggag
301 tctcccaggc cgccggagcc tgccacggac tctgcttcca agcccgcgga gcccacagat
361 gtgcccacag tcgatttcgg tggagcggag ccccaagaaa aggctcctag gagcagtact
421 gaaaagactg gtggtgacaa tgatgttgaa gaatccagta gatcttcctc tactgtttca
481 cagagaagaa agcgaatatc aagtacttct agcctggtta agtctagtgt cagtgttcct
541 tcagaatctc atcccttatc tacaattaat caagaggctc cacagccaac tgccacttca
601 acaaaagaga aacagccatg ctcagacaga taccgaatat acaaagccca gaaactgagg
661 gaaatgttaa aagaagaatt gagaaaagag aagaaacaat ggaaaaacaa atatgctata
721 aatgaaagtc agaggccacc agatcgttca aaaatgacta tgagagactt catatattat
781 ctaccagata ataatccaat gacttcttca ctggaacaag aaaagaaaac tgaaaagcca
841 tcgactccag tccagacaag agagcaagaa ggtaagagta ctcctaatgc tgaagataat
901 gaaatggaag aagagacaga tgatgggcca ttactggttc ctcgagtaaa agtggcagaa
961 gatggttcca ttattttgga tgaagaaagt ttaactgtag aagttttaag aacaaaaggc
1021 ccttgtgttg ttgaagaaaa tgaccccata tttgagcgcg gttctacaac tacatactcc
1081 agctttagga aaaactatta ctctaaacca tggtcaaata aagaaacaga tatgtttttt
1141 ttagccatca gcatggtagg aactgacttt tctatgatcg gacaactttt tcctcacaga
1201 gcaaggatag aaattaagaa taaatttaaa cgggaagaga aaacaaatgg atggagaata
1261 gacaaagcat tccaggaaaa gcgccctttt gacttcgatt tttttgctca tttgcttcag
1321 aaagttcttg ctgaagaaga gaaaagaaaa caaaaatctg ttaaaaatca cagtttaaag
1381 gagaagaaat ccaccaaacc acggaaaaat gtaaaagtga aaaaagttgc ctgtgaagga
1441 gtgaataatg atccagatga gtctatgagt tctagaattt cagacacgga aagatctcag
1501 aaggatgctc agacagttga agaagagtct ctgaccttat caagggagga tgcagagcag
1561 gttgcattag aagtagacct aaatcaaaag aaaagaagga ggaagaagca agatggagct
1621 aatgaactgg gagtaaacaa tcttttagaa aatgccactg ttcaggcggg tccttctaaa
1681 ggagaaaaac acaagaataa atgtcaggct ataaggcctg agctaaagga aggtgaatgc
1741 agtaaggagc agatgctttc ctgcacacaa aacatagatg gcattgtggg ttttgcctcc
1801 actgaaaaag ttgagaaaag aactgacccc atcctttcat taagtaatca acaagatgcc
1861 acatcagtag caactgagtc ttcagaatca agcacttcag atttgccttc attcgaagtt
1921 ggaattagag cattgtgtga ggtgaataat gctgagggta gttgtataga agaaagaaat
1981 gttgacctaa aaaataattc actggaaatt gatcaaacag aaaatgttaa accaatgttg
2041 agaggtcgct tccaaagacc taaacccaat ttgtcaaggg ctgggaagaa atcagttctt
2101 tcacaaggca aaacagagtc agagagcaag aattcacatt caaaaacttc agttgaaaag
2161 aaccacgtgg aaaaagataa aatgaataca ttggacattt tgagaatgga gactacagag
2221 agagagaatc cagaagctga aactgtatct gttttgggtg aaaaaaattg tctgcaggaa
2281 gggagtcaac taaaggcttt aagacctgta caagtgaggg gccgattgca aaagccaaag
2341 ccaaatgcag gtaaagctgc tgaaagaaaa gaaattctca tatcacagga agaaattggg
2401 gccaatgtag agaagaatga aaatgaatcc tgtgctgata gagatactcc tcaacacatg
2461 gaagatcaat cgcgtaaaga ttttgaagag gaagatgtca tattacagcc tgagaaaaat
2521 gattcttttc aaaatgtgca gccagatgag cccaaggttc ttaatgaatg tctaagcgtt
2581 caagagaata ataaggcaaa taaacttaac caagtcccaa ttctaaggac tcgatttcag
2641 aaaccaaagc caaatatagg aagaggaact ggaaggagag aaatttcctc aaaggaagag
2701 gtactagaga agattcttgt ctctggggaa atggcggcag cattgagaga aactgtaaga
2761 ctagacacct caccaaagga gatggtacca gcagagatta atactaaaga aatgcagtca
2821 gatttaaaag aaactggaag aagagccatt tctcccaggg agaagattct agatgtgatt
2881 gatgacacca tagaaatgga gacaggtctg aaagcaatgg gaagagagat ttgtctaagg
2941 gagaagacgc cagaggtgat tgatgccact gaggaaatag acaaagattt ggaagaagct
3001 ggaagaagag aaatatcccc acagaaaaat ggcccagagg aggttaagcc tctaggtgaa
3061 gtggagacag atttgaaagc aactggaaat gagagttccc caagggagaa gacaccagag
3121 ggtactgatg ccactgagga aatagacaaa aatttggaag aaactggaag aagaaaaata
3181 tccccaaggg aaaatggccc agaggaggtc aagcctgtag atgaaatgga gacagatttg
3241 aacgcaactg gaagagagag ttctccaagg gagaagacac cagaggtgat tgatgctact
3301 gaggaaatag atttggaaga aactgaaaga gaagtatccc cacaggaaaa tggactagag
3361 gaggtcaagc ctctaggtga aatggagacg gatttgaaag caactggaag agacagtttc
3421 ccaaggggga agacaccaga ggtgattgat gccattgagg aaatagagat agatttggaa
3481 gaaactgaaa gagaaatatc cccacaggaa aatggcctag aggaggttaa gcctctaggt
3541 gaaatgcaaa cagatttgaa agcaaccgga agggagattt ccccaaggga gaagacacca
3601 gaggtgattg atgccactga ggaaatagac aaagatctgg aagaaactgg aagaagagaa
3661 atatccccag aggaaaatgg cccagaggag gtcaagcctg tagatgaaat ggagacagac
3721 ttgaaaacaa ctggaagaga gggttcctca agggagaaga cacgagaggt gattgatgct
3781 gctgaggtaa tagagacaga tttggaagaa actgaaagag aaatatcgcc acaggaaaat
3841 ggcccagagg aggtcaagcc tgtaggtaaa atggagacag atttgaaaga aattagagaa
3901 gaaatttccc aaagggaaaa ggtgctagca gagttcagtg ctataaggga aaaggagatt
3961 gatttgaaag aaactggaaa aagagacatt cccatcatgg agaaagtatc aggaaagatg
4021 gctgttgttg aagaaatgga ggcagatttg aaagaaactg gaaaagaaaa ttttagagag
4081 agaggatctg aagagatctg tgttactgag gaaaaggtgg cagaattgaa acaaactgga
4141 aaaacagaca tttctccaag ggaaaacgag ctagaggaga ccagtacctc aagacaaact
4201 gacacacatt taatgcagag cggtagcaat gacttcagtg ctatgccttc actagatatt
4261 cagaacatta gcagtgaagt actgtcgatg atgcatacac ctgtagaaga aaaaagaaat
4321 tctgaaaaag aagtatcaag tcacttcagt catttcaaga tttcttcaca gactcatgaa
4381 tctgataaaa cagaagtcca ggggattcaa tctccagatg ttccagagca gttttcagat
4441 attaatttaa gcaaatctct tcctcaagaa cagaagccac ttgaaattaa accagcacct
4501 tttgtgagga gccgattcaa aagaccaaaa ccaaacttag caagagcagc tttgaagaga
4561 gagactacag aatcagaaaa atatatatat gagaagaaat cagaaaccaa gaaaatggag
4621 actattgtga tgcaagaaaa taatgaacaa actgatactc tcccttctca acatgatgaa
4681 gcttccctaa tgatatcaag agaaaaagac acattaggtc acaggaatga ggaggctgtg
4741 atattgccat gtacacagac tgaaaggaac ctttcacctt caaattcttg tgaacctaaa
4801 gaggagtctc agtcagcacc agtccagaaa aatgactcag ttgtttctgt ggggactaat
4861 aatgtaaaca ctttccagca agaaatgaag gaaagtgtta tccaaactgc tcgacaagta
4921 aggggccgac ttcagagacc gagaccaaat ataagaaaga caggacagag gcaaatagta
4981 gacaaaggtg aagccaaagg cataattaag gaaggaagaa cgatattacc aaaagatgaa
5041 actgaaaaga aagtcttaac tgtgtcaaat tctcaaattg aaactgaaat tgaagttcca
5101 tcgtccgcag ttccagaaca cagaatgtat gaaaatcaaa gtcaggtggt tcttgtagaa
5161 aaccttcatg ttaacaaaac aaatgaaaca atcagacatg aaaataaacc gtatgttcct
5221 agttcagcac aaatgacaag aaggaaattc caaaaggcta agccaaattt gggaagagca
5281 cacagtaaga aagaggaacc agttttagaa aaagtcacaa cagatcagag caaggaaggc
5341 aagccagaag atcatttgct gcagaaagga gcttccaaca cccagctcct tctaaaagaa
5401 aaagctgagc ttctgacatc tctggaggtt tcagcaagaa aagattgtgt aggttccaaa
5461 gagtctgctt tggcaaaaat agatgcggaa ttagaagaag ttggaccatc aagaagggtt
5521 ggagaggaaa ctgtaggaga taattcacca tcttcagttg ttgaagagca atatctcaat
5581 aaactaacaa gctgtccaca accgttaaac gaaacaagtt actctaaaat tgccctggat
5641 gggaaaacaa ctatctcttc tacatctgag tatgagagaa atcgtggtga aaggagaagt
5701 cataaaaagt tcaaaccaaa tgtcaccaga ggtcgtggat caaaacgagt tcggggtaag
5761 acctctaaga aggaacctag agcttccaag gccatgctgg tgactcttcg ggcttcccag
5821 gaagaagatg atgatgctga cgattttgag tctgactatg aggaagaaag ctatcatctt
5881 gctcccgaag aagtaaacaa agctccagta tttgtacctg ttggtctcag atctcctgaa
5941 cctgtttctg ctcagattga ggaaacaatg gaagagcttg aaataactgt gaatgtccca
6001 gatgtaggat gcatagctgt tgttgaacat gagctaccaa acacagatgt gactactgaa
6061 gaaatgaaac aagaagaaaa tttgagtgta ccgtttgaaa tgaccacaag tgaacatatc
6121 caagatgaac caggtaccaa tgatggaagc accgaagctg caataacttt acttacaatg
6181 ggagatctag tattgcagtc agagatcagt agtgaacagg gtgatgtagg agtatgtata
6241 cttcctcatg ttcattcaaa ggataaaagc catattcctt ctagcctaga taatgtaaat
6301 cacaaaattg ttcatgaatg tcaggaactt tcttcacctg tcattactac atctcctgca
6361 tcatttgaag aaaacaagat tgtattggag gaacaaagtt ccagagaaga aataagttta
6421 atggagaaag taaaggagaa tgctacacca accaggaata caatttctaa agtgaccagt
6481 aatttgagaa taagaagtag gcttgctaag cctaaaccaa atcttgagaa gactttaggg
6541 accaacaggc ttgatgatta tcaggaagtt tccagtttgt gtgtaaccaa aggggcagaa
6601 atggaaactc aaagagaaac agagaaaaat gcttccaaag caacagaatt ggaaaataaa
6661 aaccttggac cagttacaac agcagagaat aaggatcaga gcaaattggc atgtgtacat
6721 ggtatcaaag ggaccagtat ttcttcagaa gtaaacctaa ctgaaagaaa cgaaaatcaa
6781 gaagagagct ctcaggaggt tcacatgttg tcagttgctc cagttgcttc ctctgagaca
6841 gggccctgca cacttggttt ggataggggt cttggtgaaa attctgttga agagccccag
6901 ataaaggact ctaaaggaga cagtgtgctt acacttcctg tgccagaggt aaaagaatgt
6961 acagtataat aagggatagc aaggtgtttt cctccattta aaaaaaaaaa aggtataatt
7021 tacatacaat aaacttcacc tcttttatct tcatttttct ttatttcttc tttttttttt
7081 ggagacagtc ttgttctgtt gcccaggcaa gagtgcagtg gtatgatctc agctcactgc
7141 agcctctgcc acccagattc aacagattct cctgcctcgg cctgccgggt agctgggact
7201 acaggca
//