LOCUS AJ238381 1840 bp DNA linear HUM 14-NOV-2006
DEFINITION Homo sapiens pax9 gene, exons 1-2 and joined CDS.
ACCESSION AJ238381
VERSION AJ238381.1
KEYWORDS pax9 gene; pax9 protein; transcription factor.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1840)
AUTHORS Egger C.
JOURNAL Submitted (19-APR-1999) to the INSDC. Egger C., Department of
Developmental Immunology, Max-Planck Institute for Immunobiology,
Stuebeweg 51, D-79108 Freiburg, GERMANY.
REFERENCE 3
AUTHORS Hetzer-Egger C., Schorpp M., Boehm T.
TITLE Evolutionary conservation of gene structures of the Pax1/9 gene
family
JOURNAL Biochim. Biophys. Acta 1492(2-3), 517-521(2000).
PUBMED 10899593
FEATURES Location/Qualifiers
source 1..1840
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
mRNA join(<1..395,1199..1825,AJ238382.1:213..352,
AJ238383.1:512..>979)
/gene="pax9"
exon <1..395
/gene="pax9"
/number=1
CDS join(392..395,1199..1825,AJ238382.1:213..352,
AJ238383.1:512..766)
/gene="pax9"
/product="pax9 protein"
/function="transcription factor"
/db_xref="GOA:P55771"
/db_xref="HGNC:HGNC:8623"
/db_xref="InterPro:IPR001523"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR033204"
/db_xref="InterPro:IPR036388"
/db_xref="UniProtKB/Swiss-Prot:P55771"
/protein_id="CAB41533.1"
/translation="MEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISR
QLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEI
RDRLLADGVCDKYNVPSVSSISRILRNKIGNLAQQGHYDSYKQHQPTPQPALPYNHIY
SYPSPITAAAAKVPTPPGVPAIPGSVAMPRTWPSSHSVTDILGIRSITDQVSDSSPYH
SPKVEEWSSLGRNNFPAAAPHAVNGLEKGALEQEAKYGQAPNGLPAVGSFVSASSMAP
YPTPAQVSPYMTYSAAPSGYVAGHGWQHAGGTSLSPHNCDIPASLAFKGMQAAREGSH
SVTASAL"
intron 396..1198
/gene="pax9"
/number=1
exon 1199..1825
/gene="pax9"
/number=2
intron 1826..>1840
/gene="pax9"
/number=2
BASE COUNT 381 a 547 c 585 g 327 t
ORIGIN
1 cccaggtggg gagctagcct gaaagagaca gcggaaggag tttcctggac tgcgctgtcg
61 ctcaccgacc cgcaccaatc accatgcagc ttgccctcgg acccgcccct tttagggcgt
121 gtccccagtg agtgatagac ggagccgccc tgccctgctc agcccagccc acgttgctgc
181 ttagattgaa atgcagaact caagcctctt tcatcggggc acagacttcc ttttacttct
241 tccttttgcc ctctcgcctc ctcctcctgg gaagaagcgg aggcgccggc cggtcggccg
301 ggatagcaac aggccgggcc actgaggcgg tgcggaaagt ttctgtctgg gagtgcggaa
361 ctggggccgg gttggtgtac tgctcggagc aatgggtgag tggcggcggg ggactctgtc
421 agagccggga agggagggag ggagcgagcg ggcaagggag ggagggaggg agggagcgcg
481 agggcgcgcg ccactaggcg ctcacattct ctattgactt tgctcgtgtt cctacaagtt
541 gtaggaacac gctaagggtc agcggcgcac agcagttcaa tgtgaacgct ggctactggg
601 tggctgttga tgccattttc tgattttaag agaagggagc tgtggcatca gcgagcccct
661 cagcccgagt agcaaaccaa gttttgtttc acacgcgcgc acacatgcaa acaaaacagg
721 aaaagaaaag aaaagaaaac aaacaacaac aaataaaaca ccctctagct tcccctagac
781 tttgtttaac tggccgggtc tccagaagga acgctgggga tgggatgggt ggagagaggg
841 agcggctcaa ggactttagt gaggagcagg cgagaagaag cacgttcagg cgtcaagacc
901 gatttctccc cctgcttcgg gagacttttg aacgctcgga gaggcccggc atctcaccac
961 tttacttggc cgtaggggcc tccggcacgg caggaatgag ggagggggtc cgattggaca
1021 gtgacggttt ggggccgttc ggctatgttc agggaccata tggtttgggg acagccccag
1081 tagttagtac gggacgggtg cgttcgccca gtccccggat gcgtagggag gcccagtggc
1141 aggcagctgt cccaagcagc gggtgcgcgt ccctgcgcgc tgtgtgttca ttttgcagag
1201 ccagccttcg gggaggtgaa ccagctggga ggagtgttcg tgaacgggag gccgctgccc
1261 aacgccatcc ggcttcgcat cgtggaactg gcccaactgg gcatccgacc gtgtgacatc
1321 agccgccagc tacgggtctc gcacggctgc gtcagcaaga tcctggcgcg atacaacgag
1381 acgggctcga tcttgccagg agccatcggg ggcagcaagc cccgggtcac tacccccacc
1441 gtggtgaaac acatccggac ctacaagcag agagaccccg gcatcttcgc ctgggagatc
1501 cgggaccgcc tgctggcgga cggcgtgtgc gacaagtaca atgtgccctc cgtgagctcc
1561 atcagccgca ttctgcgcaa caagatcggc aacttggccc agcagggtca ttacgactca
1621 tacaagcagc accagccgac gccgcagcca gcgctgccct acaaccacat ctactcgtac
1681 cccagcccta tcacggcggc ggccgccaag gtgcccacgc cacccggggt gcctgccatc
1741 cccggttcgg tggccatgcc gcgcacctgg ccctcctcgc actccgtcac cgacatcctg
1801 ggcatccgct ccatcaccga ccaaggtagg ggctccagag
//