LOCUS AJ133421 2311 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for leucocyte vacuolar protein sorting.
ACCESSION AJ133421
VERSION AJ133421.1
KEYWORDS vacuolar protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2311)
AUTHORS Rajasekariah P.
JOURNAL Submitted (22-MAR-1999) to the INSDC. Rajasekariah P., Immunology,
Concord Hospital, Hospital Road, Concord, NSW 2139, AUSTRALIA.
REFERENCE 2
AUTHORS Rajasekariah P., Eyre H.J., Stanley K.K., Walls R.S.,
Sutherland G.R.
TITLE Molecular cloning and characterization of a cDNA encoding the human
leucocyte vacuolar protein sorting (h1Vps45)
JOURNAL Int. J. Biochem. Cell Biol. 31(6), 683-694(1999).
PUBMED 10404641
FEATURES Location/Qualifiers
source 1..2311
/db_xref="H-InvDB:HIT000244773"
/organism="Homo sapiens"
/chromosome="1"
/map="1q21-q22"
/mol_type="mRNA"
/country="Australia"
/cell_type="leucocyte"
/db_xref="taxon:9606"
CDS 34..1746
/gene="hlVps45"
/product="vacuolar protein sorting"
/db_xref="GOA:Q9NRW7"
/db_xref="H-InvDB:HIT000244773.13"
/db_xref="HGNC:HGNC:14579"
/db_xref="InterPro:IPR001619"
/db_xref="InterPro:IPR027482"
/db_xref="InterPro:IPR036045"
/db_xref="UniProtKB/Swiss-Prot:Q9NRW7"
/protein_id="CAB40417.1"
/translation="MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEI
LQKEVYLFERIDSQNREIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVI
SKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQ
GLTALLLSLKKCPMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDR
LDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNM
YLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTV
VGELSRLVSERNLLEVSEVEQELACQNDHSSALQNIKRLLQNPKVTEFDAARLVMLYA
LHYERHSSNSLPGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITK
QFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIG
GATYEEALTVYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASGLHSRSKESSQVTSRS
ASRR"
regulatory 2252..2257
/gene="hlVps45"
/experiment="experimental evidence, no additional details
recorded"
/regulatory_class="polyA_signal_sequence"
polyA_site 2276
/gene="hlVps45"
/experiment="experimental evidence, no additional details
recorded"
BASE COUNT 699 a 482 c 521 g 609 t
ORIGIN
1 gaagggctgt agggtacttg tcaattcgcc gccatgaacg tggtttttgc tgtgaagcag
61 tacatttcca aaatgataga ggacagcggg cctggtatga aagtacttct catggataaa
121 gagacgactg gcatagtgag tatggtatac acacaatcgg agattctaca gaaggaagtg
181 tacctctttg aacgcattga ttctcaaaat cgagagatca tgaaacacct gaaggcaatt
241 tgttttcttc gacctacaaa ggagaatgtg gattatatta ttcaggagct ccgaagaccc
301 aaatacacta tatatttcat ttatttcagt aatgtgatca gcaagagtga cgtgaagtca
361 ttggctgaag ctgatgaaca ggaagttgtg gctgaggttc aggaatttta tggtgattac
421 attgctgtga acccacattt gttttccctc aatattttgg gttgctgcca gggtcgaaat
481 tgggatccag cccagctatc tagaacaact caagggctta cagctctcct tttatctctg
541 aagaagtgtc ccatgattcg ttatcagctc tcatcagagg cagcaaagag acttgcagag
601 tgcgttaagc aagtgataac taaagaatat gaactgtttg aattccgtcg gacagaggtt
661 cctccattgc tccttatttt agatcgcttg gatgatgcca tcaccccatt gctaaaccag
721 tggacatatc aggccatggt ccacgaacta ctaggcataa acaacaatcg gattgatctt
781 tccagagtgc cgggaatcag taaagactta agagaagtgg tcctatctgc tgaaaatgat
841 gaattctatg ctaataatat gtacctgaac tttgctgaga ttggtagcaa tataaagaat
901 ctcatggaag attttcagaa gaagaaacca aaagaacagc aaaaactaga atcaatagca
961 gacatgaagg cgtttgttga gaattatcca cagttcaaga aaatgtctgg gactgtttca
1021 aagcatgtga cagtggttgg agaactgtct cgattggtca gtgaacggaa tctgctggag
1081 gtttcagagg ttgagcaaga actggcctgt caaaatgacc attctagtgc tctccagaat
1141 ataaaaaggc ttctgcagaa ccccaaagtg acagagtttg atgctgcccg cctggtgatg
1201 ctttatgctt tacattatga gcgccacagc agcaatagcc tgccaggact aatgatggac
1261 ctcaggaata aaggtgtttc tgagaagtat cgaaagctcg tgtctgcagt tgttgaatat
1321 ggtggtaaac gagtcagagg aagtgacctc ttcagcccca aagatgctgt ggctatcacc
1381 aaacaattcc tcaaaggact gaagggagta gaaaatgtat atacacagca tcaacctttc
1441 ctacatgaaa ccctggatca tctcatcaaa ggaaggctta aggaaaacct atatccttat
1501 ttaggcccca gcacactcag agacagacct caggatatca ttgtgtttgt aattggagga
1561 gccacctatg aagaggctct aacagtttat aacctgaacc gcaccactcc tggagtgagg
1621 attgtcctgg gaggcaccac agtgcacaac acgaaaagtt tcctagagga agttctggct
1681 tctggactgc acagccgaag caaggagagc tctcaagtca catcaaggtc agcgagcaga
1741 agatgaaacg gtggttgggg gaagggcaca gcttcctctc tttgtcccca ctacaggttt
1801 tccctactaa acaaaggtgt tggagagcag ctttgggttc tgtgctggtt gttagaactc
1861 atctccaggt agcccacgga tagcggttgg cacagacaca agactcccag agttgtccta
1921 acaataagtc tgagcccatc tcaacccact tttctccggt agtctttatg tatctgttag
1981 cacatcactt cagttactga tgaattttgt tgggatctga cttggggaaa gggttatcag
2041 agcctagagg ggcttaaaaa gtaatcattt gatgtacata ccacactcct tggcttcctt
2101 tctcttccct taaccctttc tcgttttcat taaccacatt cctgcacaac gcatttctga
2161 aaacctacca tgtttcttta cagaccatcc aaaaattttt tgtgccctac atagcaattt
2221 tctgtggcac tgagaaacca tgtatgacca caataaaaat ccattttgtg aaaggaaaaa
2281 aaaaaaaaaa aaaaaaaaaa aaggcggccg c
//