LOCUS AJ131186 2167 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for nuclear matrix protein NMP200.
ACCESSION AJ131186
VERSION AJ131186.1
KEYWORDS NMP200; nuclear matrix protein; PRP19; splicing factor.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2167)
AUTHORS Gotzmann J.P.
JOURNAL Submitted (27-NOV-1998) to the INSDC. Gotzmann J.P., Oncological
Biochemistry, Institute of Tumor Biology-Cancer Research-Univ.of
Vienna, Borschkegasse 8a, Vienna, A-1090, AUSTRIA.
REFERENCE 2
AUTHORS Gotzmann J.P., Gerner C., Meissner M., Holzmann K., Grimm R.,
Mikulits W., Sauermann G.O.
TITLE hNMP200: A novel human common nuclear matrix protein combining
structural and regulatory functions
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..2167
/db_xref="H-InvDB:HIT000244630"
/organism="Homo sapiens"
/mol_type="mRNA"
/clone="pJG6"
/cell_line="HeLa"
/cell_type="epithelial"
/tissue_type="cervix"
/db_xref="taxon:9606"
CDS 208..1722
/product="nuclear matrix protein NMP200"
/note="related to splicing factor PRP19"
/db_xref="GOA:Q9UMS4"
/db_xref="H-InvDB:HIT000244630.14"
/db_xref="HGNC:HGNC:17896"
/db_xref="InterPro:IPR000772"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR003613"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR013915"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR017986"
/db_xref="InterPro:IPR019775"
/db_xref="InterPro:IPR020472"
/db_xref="InterPro:IPR036322"
/db_xref="InterPro:IPR038959"
/db_xref="PDB:4LG8"
/db_xref="PDB:5MQF"
/db_xref="PDB:5XJC"
/db_xref="PDB:5YZG"
/db_xref="PDB:5Z56"
/db_xref="PDB:5Z57"
/db_xref="PDB:6FF7"
/db_xref="PDB:6ICZ"
/db_xref="PDB:6ID0"
/db_xref="PDB:6ID1"
/db_xref="PDB:6QDV"
/db_xref="UniProtKB/Swiss-Prot:Q9UMS4"
/protein_id="CAB51857.1"
/translation="MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINN
QPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQE
LSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPM
DLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHS
ASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ
DLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSD
IQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS
GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYL
ALGGTDVQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL"
BASE COUNT 479 a 610 c 616 g 462 t
ORIGIN
1 aattcggcac gaggaggtgc tgaaggctgt ggcgcgcggc tgtccccatt cccacgtgaa
61 gcgctacgct agcatcgctc ggctggcggc tcccagctcg ccgcggagca gtcccggcag
121 cagcggggga ccggaagtgg ctcgcggagg ctcagaagct agtcccggag cccggcgtgt
181 ggcgcctcgg agcacggtga cggcgccatg tccctaatct gctccatctc taacgaagtg
241 ccggagcacc catgtgtatc ccctgtctct aatcatgttt atgagcggcg gctcatcgag
301 aagtacattg cggagaatgg taccgacccc atcaacaacc agcctctctc cgaggagcag
361 ctcatcgaca tcaaagttgc tcacccaatc cggcccaagc ctccctcagc caccagcatc
421 ccggccattc tgaaagcttt gcaggatgag tgggatgcag tcatgctgca cagcttcact
481 ctgcgccagc agctgcagac aacccgccaa gagctgtcac acgctctgta ccagcacgat
541 gccgcctgcc gtgtcattgc ccgtctcacc aaggaagtca ctgctgcccg agaagctctg
601 gctaccctga aaccacaggc tggcctcatt gtgccccagg ctgtgccaag ttcccaacca
661 agtgttgtgg gtgcgggtga gccaatggat ttgggtgagc tggtgggaat gaccccagag
721 attattcaga agcttcaaga caaagccact gtgctaacca cggagcgcaa gaagagaggg
781 aagactgtgc ctgaggagct ggtgaagcca gaagagctca gcaaataccg gcaggtggca
841 tcccacgtgg ggttgcacag tgccagcatt cctgggatcc tggccctgga cctctgcccg
901 tccgacacca acaagatcct cactggtggg gcggataaaa atgtcgttgt gtttgacaaa
961 agttctgaac aaatcctggc taccctcaaa ggccatacca agaaggtcac cagcgtggtg
1021 tttcaccctt cccaggacct ggtgttttct gcttcccccg atgccactat caggatttgg
1081 tcggtcccca atgcctcttg tgtacaggtg gttcgggccc atgagagtgc tgtgacaggc
1141 ctcagccttc atgccactgg cgactatctc ctgagctcct ccgatgatca gtactgggct
1201 ttctctgaca tccagacagg gcgtgtgctc accaaggtga cagatgagac ctccggctgc
1261 tctctcacct gtgcacagtt ccaccctgac ggactcatct ttggaacagg aaccatggac
1321 tctcagatca agatctggga cttgaaggaa cgtactaatg tggccaactt ccctggccac
1381 tcgggcccca tcactagcat cgccttctct gagaatggtt actacctggc tacagcggct
1441 gatgactcct ctgtcaagct ctgggatctg cgcaagctta agaactttaa gactttgcag
1501 ctggataaca actttgaggt aaagtcactg atctttgacc agagtggtac ctacctggct
1561 cttgggggca cggatgtcca gatctacatc tgcaaacaat ggacggagat tcttcacttt
1621 acagagcaca gtggcctgac cacaggggtg gccttcgggc atcacgccaa gttcatcgct
1681 tcaacaggca tggacagaag cctcaagttc tacagcctgt aggccctggc ccttctgatg
1741 gaagctgggc ctcatctcag tagaggggta gaattagggt ttgggggggg ggtgggggga
1801 atctatgggg ggagggggct ctgtggggtg ggacattcac atcatttcac tctggtctga
1861 gtggtggcct gagaaccatg gtggcatgga ccaccctcat ccatgcaact ccaggcccca
1921 tgggaacgga tgtggaagga agaactgtca ccctcttaag gcccagggtc ggagcccagg
1981 gcctctccct tcctgtcgtt caatggacgt ggtggtggct gttccacacc cattttgttg
2041 cagttcctgt gagacaggag aggctgagcc aagggaactg tgaaggggat gggcaggagg
2101 gcttgtgcag ggttttgtaa gcagtgatct agtttcatta aaaaaagaaa acaataacca
2161 taaccac
//