LOCUS AJ012159 5551 bp DNA linear HUM 15-APR-2005 DEFINITION Homo sapiens 5T4 oncofetal trophoblast glycoprotein gene. ACCESSION AJ012159 VERSION AJ012159.1 KEYWORDS 5T4 gene; 5T4 oncofetal trophoblast glycoprotein. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5551) AUTHORS Myers K.A. JOURNAL Submitted (23-OCT-1998) to the INSDC. Myers K.A., CRC Immunology Group, Paterson Institute for Cancer Research, Christie Hospital, Wilmslow Road, Manchester, M20 9BX, UK. REFERENCE 2 AUTHORS King K.W., Sheppard F.C., Westwater C., Stern P.L., Myers K.A. TITLE Organisation of the mouse and human 5T4 oncofoetal leucine-rich glycoprotein genes and expression in foetal and adult murine tissues JOURNAL Biochim. Biophys. Acta 1445(3), 257-270(1999). PUBMED 10366710 FEATURES Location/Qualifiers source 1..5551 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" misc_binding 2698..2703 /bound_moiety="Sp1" misc_binding 2704..2709 /bound_moiety="Sp1" exon 2716..2800 /gene="5T4" /experiment="experimental evidence, no additional details recorded" intron 2801..3092 /gene="5T4" /experiment="experimental evidence, no additional details recorded" exon 3093..5400 /gene="5T4" /experiment="experimental evidence, no additional details recorded" sig_peptide 3431..3516 /gene="5T4" CDS 3431..4693 /gene="5T4" /product="5T4 oncofetal trophoblast glycoprotein" /db_xref="GOA:Q13641" /db_xref="HGNC:HGNC:12004" /db_xref="InterPro:IPR000372" /db_xref="InterPro:IPR000483" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR032675" /db_xref="PDB:4CNC" /db_xref="PDB:4CNM" /db_xref="UniProtKB/Swiss-Prot:Q13641" /protein_id="CAA09930.1" /translation="MPGGCSRGPAAGDGRLRLARLALVLLGWVSSSSPTSSASSFSSS APFLASAVSAQPPLPDQCPALCECSEAARTVKCVNRNLTEVPTDLPAYVRNLFLTGNQ LAVLPAGAFARRPPLAELAALNLSGSRLDEVRAGAFEHLPSLRQLDLSHNPLADLSPF AFSGSNASVSAPSPLVELILNHIVPPEDERQNRSFEGMVVAALLAGRALQGLRRLELA SNHFLYLPRDVLAQLPSLRHLDLSNNSLVSLTYVSFRNLTHLESLHLEDNALKVLHNG TLAELQGLPHIRVFLDNNPWVCDCHMADMVTWLKETEVVQGKDRLTCAYPEKMRNRVL LELNSADLDCDPILPPSLQTSYVFLGIVLALIGAIFLLVLYLNRKGIKKWMHNIRDAC RDHMEGYHYRYEINADPRLTNLSSNSDV" mat_peptide 3517..4690 /gene="5T4" /product="5T4 oncofetal trophoblast glycoprotein" regulatory 5331..5336 /gene="5T4" /regulatory_class="polyA_signal_sequence" regulatory 5380..5385 /gene="5T4" /regulatory_class="polyA_signal_sequence" BASE COUNT 1309 a 1427 c 1434 g 1379 t ORIGIN 1 ttttcatgga aatatcttca aatttcatta gtggtcctat tatagaagac acacagcagg 61 caagtgtcag agctagaaat gaccctaaat ttctgggtcc ctattcagca gccataagca 121 attgccagct gcaggaaggt ggaggcagaa gaagtaaaaa gggaacaaga ggtgaggttt 181 acgttctgcc taagtggaac agagtagaac tttgcacaaa ctccttaatc ttgcctagag 241 gcagaatgtg ggatgtacta tatgggaggc aggcaaatct gggcctggtt cccacctcca 301 tcactcattt gaacaagtta tgtaatttat ttttgcgtca attttcttgt ctgtaaaact 361 ggagtgagag gacctaactt gagtaccgaa gtgaagagtc aatgagataa tatctgtgat 421 cagcacagtg cttggcaagt ggaagacact cagtcaagct aacttaaagc cccagttttt 481 tcatttgtac aacagaacaa caacaataat agcaacaagc aataatacta acaatattta 541 tcttgcctct gagttgtctt gaaaatcaga tgagtatata tattatgttt ctaaattcta 601 aagtgtatct cactctccta acaaagcagt tggtcttcag atcaggacca gagttaatac 661 catgccagag cattattaca ggttttttcc aatgagtaat taattttatt tttaaactta 721 tcatacagta aaattgactc ttttggttta caaagttcta tgagttatag cacgttgtat 781 aggtttatgt aaccaccacc acaatccgga tacagaacat gactacagct ttagagattc 841 tttttcaaag tgttttacat tcatgttgca aaacactttt aaaaataaga aaagagatgt 901 agataaacgt gctgaagatg caaattaatg aaaccagctt ttgtgcacaa atctctgcag 961 tttccagtgt tttcagcttt tgtctgagcc atttttgctg tcggctttgc agactatctc 1021 tttctataaa agtaatcagg cgtccgttgg agagttgggt ctttcttcac attaaaggca 1081 catgtcccag gcacaagcct caggatcctt atttgatctt ttttaatacg accaggtctt 1141 aaatttccga accatgtttt ccctaattgc cattttctct ctaaaatgaa gaagcctgga 1201 agaaccttct tatcccttcg gggaaattat ttaattggga caaaggggat gtggagttac 1261 agagagcaac gatagggctt tcaggaaccc aaaacctgtc tggtataata acagatcctt 1321 ccggtaacca accattcaat ttgtccctct cccccaaccc catcctctcc atcaccatct 1381 gccagatggc cccctgggac caatcgactt tgaaaccaaa cttctctccc aggtcagctc 1441 ctgcaatccc cactcctcgt cccttggagc tttctccaca gaagtgactt gacacaccgc 1501 gctacatctg gggagggggg cgggtccgct ttccgggaga ctcaagtctt tgctatttgc 1561 cttttgtttc tgggatgcct ttggctgcct ttctcttcca tctgctttta attttggtaa 1621 gagaaaagct aatgaatcag gaatgaatct cctctccact aatctttwtg ttttctttct 1681 ctctctctct ctcttagagt tggcgcgctc tcttcacgag ttccatcact acccaagaag 1741 tgagggggcg ggggggacag gcgggaagnc attaattaca cctaaatctg aagtttgcgg 1801 cctcaagtac cactttgatg gggagagctt ctgaagcttc catacaacct gccgtgcctt 1861 tgctgctgcc gcagtagatt ttcagctcat ttctttctgc tgctgcttcg cgctgctctg 1921 tcatgcctaa atctatctcg tcactgccaa aggtgcctga atcagggtga attccacgag 1981 attcaccagc ggttttgctc cagtccaagg taaatacagt atgcaaaatg aggaaccacc 2041 caaggatgtc ggggaggggg gagagaaagg gattccctca ccttttccgg cacattcctc 2101 gttaatttcc accaggagga ggcgcgcagc ccagctcccc tagtctctct tcttaaatcc 2161 ccctacctac ggctgccgag gttggccgcg cgtcgggagt ctccccgaca gtcctggccc 2221 tcccccgccc cccgggttgg tttttcccag ctgcggaggt tgggaggttg ggccaggggc 2281 tggggtgcga agagagtcgg cgcccgcaac gcggagccgg gaagtcgtcg ctactctggt 2341 ggaactcaga gttggttctg gaggcggcgg acgcggaggt gagcagtggg agcccgcggc 2401 ctgggagaga cccgggaggc gtcgttgggg cccctcccca tcctcgggtg gagagtaggg 2461 ttggttcggg ttgccactgt accccgagtc ccactgctgc tttgttccca gactctcccc 2521 tcctctttgg agatgacttg aacccctttg agatccgagg ggctggcggg gcgcgggctg 2581 gggggcgaca gttgtagctc cacttcctgc taatgcgaga aggtacaaaa agagatcaaa 2641 aagtcctgta acctgaaact tccctcgcat cctaaccggg accgggtgga gaggtctggg 2701 cgggggcgga gacacccgga ggccgacctt ccgccgaggc ggtgcaggaa ggaacgggag 2761 agggagaagt ttggtaggga aggaattggg gattaagcgg taagttagac gcgggagacg 2821 atctcctcgg gaaaggcgga gggcgggagg ccggtcgggt ttatttagtg tgggccaggg 2881 aagaaggaag actttgcggt ctgggtgtcg gatgcgcgtc cccctccgga gtaaaagtga 2941 ccggaggggt tggggaggcg aggccggggc gggcttttgg aaggaggtct ctgggacaga 3001 ctggagacga ctagactcga aaaggccggt ttttgcactc cggaagccgc ggcagccacc 3061 gctgttcacg cctctctcct gcttgtccca ggtccctcag aggatccagc gaggggtgcc 3121 aacaagaggc gaagaggtgg caccagggcg gcggcaggaa gaggagcggg agcaggagcg 3181 cggagcggag cgtcccgacc cgccgtgcgt actttctgga gggaaggggc gggggaatcg 3241 gcccctgagg gaagcgcccg gtggcgaggg ggttagccaa gttccggctg cggcgccact 3301 ccctcggttc cacgagagga aagttttttt tttccagacg cttccgccgg ctcgcgccct 3361 ccgggcccag cctcccgagc cttcggagcg ggcgccgtcc cagcccagct ccggggaaac 3421 gcgagccgcg atgcctgggg ggtgctcccg gggccccgcc gccggggacg ggcgtctgcg 3481 gctggcgcga ctagcgctgg tactcctggg ctgggtctcc tcgtcttctc ccacctcctc 3541 ggcatcctcc ttctcctcct cggcgccgtt cctggcttcc gccgtgtccg cccagccccc 3601 gctgccggac cagtgccccg cgctgtgcga gtgctccgag gcagcgcgca cagtcaagtg 3661 cgttaaccgc aatctgaccg aggtgcccac ggacctgccc gcctacgtgc gcaacctctt 3721 ccttaccggc aaccagctgg ccgtgctccc tgccggcgcc ttcgcccgcc ggccgccgct 3781 ggcggagctg gccgcgctca acctcagcgg cagccgcctg gacgaggtgc gcgcgggcgc 3841 cttcgagcat ctgcccagcc tgcgccagct cgacctcagc cacaacccac tggccgacct 3901 cagtcccttc gctttctcgg gcagcaatgc cagcgtctcg gcccccagtc cccttgtgga 3961 actgatcctg aaccacatcg tgccccctga agatgagcgg cagaaccgga gcttcgaggg 4021 catggtggtg gcggccctgc tggcgggccg tgcactgcag gggctccgcc gcttggagct 4081 ggccagcaac cacttccttt acctgccgcg ggatgtgctg gcccaactgc ccagcctcag 4141 gcacctggac ttaagtaata attcgctggt gagcctgacc tacgtgtcct tccgcaacct 4201 gacacatcta gaaagcctcc acctggagga caatgccctc aaggtccttc acaatggcac 4261 cctggctgag ttgcaaggtc taccccacat tagggttttc ctggacaaca atccctgggt 4321 ctgcgactgc cacatggcag acatggtgac ctggctcaag gaaacagagg tagtgcaggg 4381 caaagaccgg ctcacctgtg catatccgga aaaaatgagg aatcgggtcc tcttggaact 4441 caacagtgct gacctggact gtgacccgat tcttccccca tccctgcaaa cctcttatgt 4501 cttcctgggt attgttttag ccctgatagg cgctattttc ctcctggttt tgtatttgaa 4561 ccgcaagggg ataaaaaagt ggatgcataa catcagagat gcctgcaggg atcacatgga 4621 agggtatcat tacagatatg aaatcaatgc ggaccccaga ttaacaaacc tcagttctaa 4681 ctcggatgtc tgagaaatat tagaggacag accaaggaca actctgcatg agatgtagac 4741 ttaagcttta tccctactag gcttgctcca ctttcatcct ccactataga tacaacggac 4801 tttgactaaa agcagtgaag gggatttgct tccttgttat gtaaagtttc tcggtgtgtt 4861 ctgttaatgt aagacgatga acagttgtgt atagtgtttt accctcttct ttttcttgga 4921 actcctcaac acgtatggag ggatttttca ggtttcagca tgaacatggg cttcttgctg 4981 tctgtctctc tctcagtaca gttcaaggtg tagcaagtgt acccacacag atagcattca 5041 acaaaagctg cctcaacttt ttcgagaaaa atactttatt cataaatatc agttttattc 5101 tcatgtacct aagttgtgga gaaaataatt gcatcctata aactgcctgc agacgttagc 5161 aggctcttca aaataactcc atggtgcaca ggagcacctg catccaagag catgcttaca 5221 ttttactgtt ctgcatatta caaaaaataa cttgcaactt cataacttct ttgacaaagt 5281 aaattacttt tttgattgca gtttatatga aaatgtactg attttttttt aataaactgc 5341 atcgagatcc aaccgactga attgttaaaa aaaaaaaaaa ataaacattg ttaaaacaat 5401 tacagtgtgt gcaagtttgc tttgaaaaaa ggatgaaggg caggagtatt caatggtctt 5461 ggttccgatg ataattatta cttaacatag ctgagaatca aactgtagca atgtctaata 5521 taaatagact tgggagatcg tttcgaaatg g //