LOCUS AJ011863 2806 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for homeobox protein LSX.
ACCESSION AJ011863
VERSION AJ011863.1
KEYWORDS homeobox protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2806)
AUTHORS Raich N.A.
JOURNAL Submitted (05-JAN-1999) to the INSDC. Raich N.A., INSERM U 474,
INSERM, Hopital Henri Mondor , Creteil 94010, FRANCE.
REFERENCE 2
AUTHORS Raich N., Mattei M.G., Romeo P.H., Beaupain D.
TITLE PHTF, a novel atypical homeobox gene on chromosome 1p13, is
evolutionarily conserved
JOURNAL Genomics 59(1), 108-109(1999).
PUBMED 10395808
FEATURES Location/Qualifiers
source 1..2806
/db_xref="H-InvDB:HIT000244545"
/organism="Homo sapiens"
/chromosome="1"
/map="1p13"
/mol_type="mRNA"
/cell_line="HEL"
/db_xref="taxon:9606"
CDS 32..2320
/gene="Lsx"
/product="homeobox protein LSX"
/db_xref="GOA:Q9UMS5"
/db_xref="H-InvDB:HIT000244545.15"
/db_xref="HGNC:HGNC:8939"
/db_xref="InterPro:IPR021980"
/db_xref="InterPro:IPR039775"
/db_xref="UniProtKB/Swiss-Prot:Q9UMS5"
/protein_id="CAB51572.1"
/translation="MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMG
HIKPDLIDVDLIRGSTFAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVW
LLLLYFMQVIAIVLYLMMPIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNR
RRRKLRKTVNGDGSRENGNNSSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNK
GTETDNDPSCVHPIIKRRQCRPEIRMCQTREKPKFSDGEKCRREAFRRLGNGVSDDLS
SEEDGEARTQMILLRRSVEGASSDNGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDS
DSLAESEFESAAFSQGSRSGVSGGSRSLNMSRRDSESTRHDSETEDMLWDDLLHGPEC
RSSVTSDSEGAHVNTLHSGTKRDPKEDVFQQNHLFWLQNSSPSSDRVSAIIWEGNECK
KMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPFLHRLFREKSLDQLKSI
SAEEILTLFGGAPPVTPIIVWSIINFFERLCLTWMFFFMMCVAERTYKQRFLFAKLFS
HITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVVVSSVFLLTLSIA
FICCAQVLQGHKTSLNDAYNWEFLIWETALLLFLLRLASLGSETNKKYSNVSILLTEQ
INLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIYNITRVVIL
SAVSGVISDLLGFNIRLWKIKS"
polyA_site 2794
BASE COUNT 872 a 503 c 629 g 802 t
ORIGIN
1 gtgaaatccc attctctggc tggagacaca gatggcctca aatgagagag atgctatatc
61 gtggtaccaa aagaagattg gagcctacga tcagcagata tgggaaaagt caatcgaaca
121 gactcagatt aagggtttga aaaacaaacc gaaaaagatg ggccacataa agccagactt
181 gattgacgtt gacttaatca gagggtcaac atttgccaaa gcaaaacctg aaattccatg
241 gacatctctg actcggaagg ggcttgttcg agttgtattt tttccattgt tcagcaattg
301 gtggattcag gttacctctt taagaatctt tgtttggctg ttactacttt atttcatgca
361 agttatagca attgtcttat atttgatgat gcctattgtg aacataagtg aagtacttgg
421 acccttgtgc cttatgctac tcatgggaac tgtccactgt caaattgtgt ctactcagat
481 aacaagacca tcaggaaaca atggaaatcg aagaagaaga aaattacgaa aaactgtaaa
541 tggtgatggg agccgagaaa atggaaataa ctcctctgat aaagtcagag gaatagaaac
601 tttggaatct gtacccatta ttggtggttt ttgggagact atctttggca acaggattaa
661 aagagtaaaa ttaatatcta acaaagggac tgaaactgac aatgacccaa gttgtgtcca
721 tcctatcatt aagaggagac aatgtcgacc agagattaga atgtgccaaa caagagagaa
781 accaaaattt tcagatggag aaaagtgccg tagggaggct tttaggcgtt tgggtaatgg
841 ggtgtctgat gacctgtcaa gtgaagaaga tggtgaagca cggacacaga tgatattatt
901 gcgtaggagt gtggaagggg cctcaagtga caatggttgt gaagttaaga atagaaaatc
961 aatactttca aggcacctaa actctcaggt aaagaaaacc actacaaggt ggtgtcatat
1021 tgtgcgggat tcagatagtc tggctgaatc agaatttgaa tcagcagcct tcagccaggg
1081 ctctagatcg ggtgtgagtg gtggctctcg aagcctcaac atgtcaagaa gagactcaga
1141 aagcacccgc catgactcgg agactgagga catgttatgg gacgacctgc tacatggccc
1201 agagtgccgg tcatctgtca ccagtgacag tgagggggcc catgtgaata cccttcactc
1261 agggaccaaa cgtgacccca aagaggatgt ttttcagcag aatcatttat tctggcttca
1321 gaattcaagt ccttcctctg atcgagttag tgcaataatc tgggagggga atgagtgcaa
1381 aaagatggat atgtctgtgt tggaaataag tggcatcatc atgagcaggg tcaatgccta
1441 tcagcaagga gtaggttatc agatgctggg aaatgttgtc actattggat tagcattttt
1501 tccattctta catcgacttt tccgtgagaa gagccttgac caactaaagt ccatttcagc
1561 tgaggagatc ttgactctct ttggtggggc accacctgtt acacctatta ttgtttggtc
1621 gataattaat ttttttgaaa gattgtgtct tacttggatg ttttttttca tgatgtgtgt
1681 ggcagagaga acatataaac agagattttt atttgcaaaa ctcttcagcc atattacttc
1741 tgccaggaaa gctaggaaat atgaaatacc tcatttcaga cttaagaagg tggagaatat
1801 taaaatatgg ttatcactgc gttcctatct aaagagacgg gggccacagc gttcagttga
1861 tgtggttgta tcctcggttt tcctactgac actttcgatt gctttcattt gttgtgctca
1921 ggttctccaa ggacataaaa cttccctgaa tgatgcttat aactgggagt ttttgatctg
1981 ggaaacagct ttactacttt ttttattgcg tctggcctca ctggggtctg aaaccaataa
2041 gaaatacagc aatgtttcaa tattacttac agaacagatt aatttatatc ttaagatgga
2101 aaaaaagcca aataagaaag aacagcttac tctagtaaac aatgtattaa agctgtccac
2161 caagttgttg aaagagctgg acacaccatt tagactctat ggactgacaa tgaatccctt
2221 aatctacaat atcacaagag tagttatcct ttctgctgtc tcaggtgtta taagtgatct
2281 tctaggattt aatataagac tgtggaaaat taaatcataa gctgagttaa atgcctggac
2341 tctcccctgg ctggtatcaa aacttaccta tcaaggaaag tgatgactgc agaaaccagt
2401 gagataccca cctgcttgtt cacatgcaca ggtgctctca gctctgcaaa gcgaatgaat
2461 ggtgtttccg gaggagcaag tccttttcca actgggtgtg catgctaaaa acctgtattt
2521 tcatgctttt caaacaacat gaatagtcag ctgactaaag actgtgtgtg ttgtggtaac
2581 accaaagaca attttgatag tttagcttca gtactgtgac agttatgttt actggacata
2641 gtctttttgg caactatgat agatgcccaa agcatgaagc aaagctattt tatggaaata
2701 tgcaaattca atacttttca ttatagtcta tagaactgga gatttcattt ctctatcaaa
2761 gagagatcaa gcgaactatt taggtaaatc cgaataaaag actttt
//