LOCUS AJ011679 4560 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for Rab6 GTPase activating protein.
ACCESSION AJ011679
VERSION AJ011679.2
KEYWORDS GTPase activating protein; rab6 GTPase.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Cuif M.H.
JOURNAL Submitted (30-SEP-1998) to the INSDC. Cuif M.H., Mecanismes
moleculaires du transport intracellulaire, CNRS UMR 144 - Institut
Curie, 12 rue Lhomond, Paris, 75005, FRANCE.
REMARK revised by [3]
REFERENCE 2
AUTHORS Cuif M.H., Possmayer F., Zander H., Bordes N., Jollivet F.,
Couedel-Courteille A., Janoueix-Lerosey I., Langsley G.,
Bornens M., Goud B.
TITLE Characterization of GAPCenA, a GTPase activating protein for Rab6,
part of which associates with the centrosome
JOURNAL EMBO J. 18(7), 1772-1782(1999).
PUBMED 10202141
REFERENCE 3 (bases 1 to 4560)
AUTHORS Cuif M.H.
JOURNAL Submitted (08-JAN-2001) to the INSDC. Cuif M.H., Mecanismes
moleculaires du transport intracellulaire, CNRS UMR 144 - Institut
Curie, 12 rue Lhomond, Paris, 75005, FRANCE.
FEATURES Location/Qualifiers
source 1..4560
/db_xref="H-InvDB:HIT000244536"
/organism="Homo sapiens"
/mol_type="mRNA"
/tissue_type="placenta"
/db_xref="taxon:9606"
CDS 322..3315
/product="Rab6 GTPase activating protein, GAPCenA"
/db_xref="GOA:Q9Y3P9"
/db_xref="H-InvDB:HIT000244536.14"
/db_xref="HGNC:HGNC:17155"
/db_xref="InterPro:IPR000195"
/db_xref="InterPro:IPR006020"
/db_xref="InterPro:IPR011993"
/db_xref="InterPro:IPR022164"
/db_xref="InterPro:IPR033185"
/db_xref="InterPro:IPR035969"
/db_xref="PDB:4NC6"
/db_xref="UniProtKB/Swiss-Prot:Q9Y3P9"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAB40267.2"
/translation="MDDQPGEKELVKRSQLDGEGDGPLSNQLSASSTINPVPLVGLQK
PEMSLPVKPGQGDSEASSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSIL
RSQCQISLDVTLSVPNVSEGIVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFA
FTESHYNAELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATAAPQTPDSDIF
TFSVSLEIKEDDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFG
LLLSPGKDVRNSDMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQVVNEETPKDKVLF
MTTAVDLVITEVQEPVRFLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQRER
KNNTDTLYEVVCLESESERERRKTTASPSVRLPQSGSQSSVIPSPPEDDEEEDNDEPL
LSGSGDVSKECAEKILETWGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLA
GCHNNDHLVEKYRILITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAY
SVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFY
QLERLMQEYIPDLYNHFLDISLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGIS
VIFNVALGLLKTSKDDLLLTDFEGALKFFRVQLPKRYRSEENAKKLMELACNMKISQK
KLKKYEKEYHTMREQQAQQEDPIERFERENRRLQEANMRLEQENDDLAHELVTSKIAL
RKDLDNAEEKADALNKELLMTKQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIK
KNSSIIGDYKQICSQLSERLEKQQTANKVEIEKIRQKVDDCERCREFFNKEGRVKGIS
STKEVLDEDTDEEKETLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQA
AKKTWFNRTLSSIKTATGVQGKETC"
BASE COUNT 1364 a 916 c 1080 g 1200 t
ORIGIN
1 ggcggaggct ccgggacggc gagcggcggg cggcggagga ggagacggca ggtcgggcat
61 taaaaaatat ttaatcattc atgtgttgag actcattctt gagttatgga tgacaaggct
121 tctgttggaa aaatcagtgt ctcttcagac tcagtatcta ctcttaatag tgaagatttt
181 gtcttggttt ccaggcaagg agatgagaca ccatctacaa ataatggaag tgatgatgag
241 aaaacaggac tcaagattgt agggaatgga agtgaacagc agctgcaaaa agagctagca
301 gatgtactga tggatcctcc aatggacgac cagccagggg aaaaggagct tgtgaaaagg
361 tcacaactgg atggtgaagg agatgggcct ctttctaatc agctctccgc ttcatccacc
421 attaaccctg tgccattagt agggctccaa aaaccagaga tgagcctacc agtgaaacct
481 ggacaaggag attctgaagc ttcaagtcct ttcacaccag tggccgatga ggacagcgta
541 gttttcagta aactgactta cttaggctgt gcctcggtaa atgctcccag gagtgaagtg
601 gaagccttaa ggatgatgtc catcttaaga agccagtgtc agatttcact agatgttacc
661 ctttcagtgc cgaatgtgtc tgaaggaatt gtgagactct tagatcctca gacaaacact
721 gaaatagcaa actaccctat ctacaaaatc ctcttctgtg tcagagggca tgatggaact
781 cctgagagtg actgttttgc tttcactgaa agtcattaca atgcagagct cttcagaata
841 cacgtcttcc ggtgtgaaat acaagaagct gtaagccgga tactttacag ttttgccact
901 gccttccgcc gttctgccaa gcagacccca ctttcagcca ctgctgcacc ccagactcct
961 gacagtgaca tctttacctt ctctgtgtct ttagaaataa aagaagatga tggtaaaggt
1021 tattttagtg cagttcccaa agataaggac agacagtgct ttaaactacg ccaaggaatt
1081 gataagaaga ttgtcatcta tgtgcagcaa acaactaata aagaacttgc cattgaaagg
1141 tgttttggtc ttctccttag tccaggaaaa gatgtacgaa atagtgacat gcacttatta
1201 gatttggaat ctatgggcaa aagttcagat ggaaagtcgt atgttattac ggggagctgg
1261 aatccaaaat ccccacattt tcaagttgta aatgaagaaa ctcctaaaga taaagtcctg
1321 tttatgacca cagctgtaga tttggtaata acagaagtac aggagcctgt tcgatttctc
1381 ctggagacaa aagtccgcgt ttgctcacct aatgaaagat tattctggcc cttcagcaaa
1441 cgtagtacta ctgaaaattt ctttttgaaa ctaaaacaga taaagcaaag ggagagaaag
1501 aataatactg acactttata tgaagttgta tgcttggaaa gtgaatcaga aagagagagg
1561 aggaaaacta cagccagtcc ttcagttcgc ctgccacagt ctggatcgca aagttcagtg
1621 ataccttctc ctccagaaga tgatgaagag gaagataatg atgaacctct cctgagtgga
1681 tctggtgatg tatccaaaga atgtgcagaa aaaattcttg aaacatgggg agaactgttg
1741 tcaaaatggc atctcaactt gaatgtgaga ccgaagcagt tgtcatcctt agtaagaaac
1801 ggtgtccctg aagctcttcg aggagaagtc tggcagctgc tagcaggctg tcataacaat
1861 gaccacctgg tagagaaata ccgcattctt atcacaaagg agtctcccca ggacagtgct
1921 atcacccggg atattaaccg aacattccca gcccatgact actttaagga cacaggagga
1981 gatggacaag attccttata taaaatatgc aaggcttatt ctgtgtatga tgaagagatt
2041 ggttattgcc agggccagtc atttcttgct gctgtgctcc ttctccatat gcctgaagaa
2101 caggcattca gtgttctggt caagatcatg tttgactatg ggctcaggga acttttcaag
2161 caaaacttcg aagatttgca ttgcaaattt taccagttgg agcgcctcat gcaggaatac
2221 attcctgacc tgtacaacca cttcctggat ataagccttg aagcacacat gtatgcctcc
2281 cagtggtttc ttactctttt cactgcaaaa ttccctctct acatggtctt ccatatcatc
2341 gacctgcttt tatgtgaggg aataagtgtt atttttaatg tcgcccttgg attattaaag
2401 acttcgaaag atgacctgct gttgacagac tttgaaggtg ccttgaagtt ctttagggtt
2461 cagcttccta agagataccg ctcagaagaa aatgcaaaaa aactaatgga attagcctgc
2521 aacatgaaga ttagtcagaa gaagttgaaa aaatacgaga aagaatatca caccatgagg
2581 gaacagcagg cccagcaaga agaccccatc gagcgatttg agcgggagaa taggcgtcta
2641 caagaagcta acatgaggtt ggaacaggaa aacgatgact tagcccatga gctggtgacc
2701 agcaagattg cactacggaa ggacctggat aacgctgagg aaaaggcaga tgctctgaat
2761 aaggagctgc tgatgaccaa acagaagttg attgatgcag aagaagagaa aagacggttg
2821 gaagaagagt ctgctcagtt aaaagaaatg tgccgtcggg aactcgacaa ggcagaatct
2881 gagattaaaa aaaacagttc tatcattggt gactataagc agatttgttc tcagttgagt
2941 gaaagattgg agaagcagca gacagccaat aaggtggaaa ttgagaaaat tcggcaaaaa
3001 gtggatgact gtgagcggtg ccgggaattt ttcaacaaag aagggcgtgt aaaaggcata
3061 agctcaacca aggaggtttt agatgaggac acggatgaag agaaagagac gctcaagaac
3121 cagctgagag aaatggagct agaactggca cagaccaaac tccagctggt ggaggccgag
3181 tgtaagatac aggacttgga acaccattta gggcttgccc tcaatgaggt gcaggcagcc
3241 aagaagacgt ggtttaaccg aacactgagc tccataaaga cagcaaccgg ggttcaaggg
3301 aaagagactt gctgagagca gctgccgcct cccgacacct tcagaaaaca cgacaccttt
3361 tgttgccttc tttggccaga tgtgtgattc tgtgacttgt cccaggacca gaatgtacct
3421 aagtcagatc catagacgca tgttggtagg tcactggacc agagcttgtg aagcaggcaa
3481 cctctggggt aagactactg atactaacag gcctgctagc tcagccgacg ctctggacac
3541 tctagaaatc actcctcagt gtgacctccc aggcctcttc cccgtgtacg tcaacacctc
3601 acccagccta aaggctgagt ttacatgatc agagttaggg gatccttcag tctgttgatt
3661 ttttttctaa accttttttt tttaatatac atatatatat atatatatat atatatatat
3721 atatatatat atatatatat atatatatat atagtggggg tggggcaagg gatcagaaat
3781 tcaaataatt cttttctgct tcaatgccag cagaaggtcc cccaggtaga catggagaag
3841 cactttgttt taaataggag ggtttcatag ttgcatctga agccacctgg ttctgttaaa
3901 ctgtatcgtg caggttttgg gtttggcatt attcatgttt ctgatcaatt ctatgcaact
3961 ctcatagttc ctgttacttt ttagcattag ctgccaaatg acttcaaaag gctggggtgg
4021 gtgacttgac tgtgagactg gattataaca tggacaaatc ttattttgct taatgtgttt
4081 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtat gtatatatat atatataaat
4141 atctttccca atatgccccg ttgacagtgt ttaaattcca gactaggact gctgatctgc
4201 acaatttaat tatgtggtta ttcgagcact taatttcact caaggttcat tgggctctgc
4261 tctcctccct gccattacgg gagctgtgga cagagctccc tcacttcaag attcctagtg
4321 tttttgcaca acaggttgtc caagtgagaa agactgagtt gcgtgtctgt aaatgtctgc
4381 gcagggtgca catgctgcga ggtctccatc ctccgggcct gtccctccca gatgggctgg
4441 gcctttgggc cctcctcaga gtatgcctgg gtacaaacct cactgttcag atgggctgta
4501 agttctcact tcaaagctat ggaatggatt ttagcacctt taaaaaaaaa aaaaaaaaaa
//