LOCUS AJ010069 2746 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for HMGBCG protein.
ACCESSION AJ010069
VERSION AJ010069.1
KEYWORDS HMG box; HMGBCG protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2746)
AUTHORS Kedra D.
JOURNAL Submitted (12-AUG-1998) to the INSDC. Kedra D., Department of
Molecular Medicine, Karolinska Hospital, CMM building, L8:00,
Stockholm, S-171 76, SWEDEN.
REFERENCE 3
AUTHORS Seroussi E., Kedra D., Kost-Alimova M., Sandberg-Nordqvist A.C.,
Fransson I., Jacobs J.F.M., Fu Y., Pan H.Q., Roe B.A., Imreh S.,
Dumanski J.P.
TITLE TOM1 genes map to human chromosome 22q13.1 and mouse chromosome 8C1
and encode proteins similar to the endosomal proteins HGS and STAM
JOURNAL Genomics 57(3), 380-388(1999).
PUBMED 10329004
FEATURES Location/Qualifiers
source 1..2746
/db_xref="H-InvDB:HIT000244379"
/organism="Homo sapiens"
/chromosome="22"
/map="q13.1"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS <1..591
/codon_start=1
/gene="HMGBCG"
/product="HMGBCG protein"
/db_xref="GOA:Q9UGU5"
/db_xref="H-InvDB:HIT000244379.13"
/db_xref="HGNC:HGNC:5003"
/db_xref="InterPro:IPR009071"
/db_xref="InterPro:IPR025228"
/db_xref="InterPro:IPR036910"
/db_xref="InterPro:IPR042477"
/db_xref="UniProtKB/Swiss-Prot:Q9UGU5"
/protein_id="CAA08991.1"
/translation="PKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLP
EKDKLIWKQKAQYLQHKQNKAEATTVKRKASSSEGSMKVKASSVGVLSPQKKSPPTTM
LLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICA
LGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL"
exon 1..82
/gene="HMGBCG"
/product="HMGBCG protein"
/number=1
exon 83..147
/gene="HMGBCG"
/product="HMGBCG protein"
/number=2
/experiment="experimental evidence, no additional details
recorded"
exon 148..253
/gene="HMGBCG"
/product="HMGBCG protein"
/number=3
/experiment="experimental evidence, no additional details
recorded"
exon 254..423
/gene="HMGBCG"
/product="HMGBCG protein"
/number=4
/experiment="experimental evidence, no additional details
recorded"
exon 424..546
/gene="HMGBCG"
/product="HMGBCG protein"
/number=5
/experiment="experimental evidence, no additional details
recorded"
exon 547..2746
/gene="HMGBCG"
/product="HMGBCG protein"
/number=6
regulatory 2698..2703
/gene="HMGBCG"
/note="AATAAA"
/regulatory_class="polyA_signal_sequence"
regulatory 2720..2725
/gene="HMGBCG"
/note="ATTAAA"
/regulatory_class="polyA_signal_sequence"
BASE COUNT 767 a 558 c 551 g 870 t
ORIGIN
1 ccaaaaaaga agaacatgtc ggcctaccag gtgttctgta aagagtatcg cgtgaccatt
61 gtggctgacc atccaggtat agattttggg gaacttagta aaaaactggc tgaggtgtgg
121 aagcaattac cagaaaaaga caaactgatt tggaagcaaa aagctcagta tctgcagcac
181 aaacagaaca aagcagaagc cacaactgtg aaaaggaaag catccagctc agaaggttcc
241 atgaaagtca aagcctcttc tgtaggagta ctgtcacccc agaagaagtc cccacccacc
301 accatgctgt taccagcctc accagccaaa gcccctgaga cagagcccat tgatgttgct
361 gctcatcttc agctgttggg agagtcccta agcctcattg gacaccgtct gcaggaaact
421 gagggtatgg tggctgtgtc tggcagtctg tcagtgcttc tggattccat tatctgtgcc
481 cttggcccct tggcatgtct caccacacaa ctacctgaat tgaatggctg tcccaaacag
541 gtcttgtcaa acacattaga caacattgct tacatcatgc cgggactgtg acagcaaaga
601 atcctgggac agaaacctta tcctacacca ttgctggttt gtgtatatat gactgttgca
661 gattccttca gtggcctctg gctgtaggtt ttaaattttt atatctatac atacatatat
721 acatatatat ataatgtaca atatatacat agactgtaac tactttgctt ttaataattt
781 tatgaaatgg caaaggttta gccaagagga aattttggca tgaatacagg cttgggattc
841 ttttttctcc tgtggtggat aaatctgcct taaaaatcaa tgtaacttgg gggctggggg
901 cttgttctgg gtgccaagcg catctcttta tggacagcta aaatgtgatt attttccaag
961 ctcagttgga cctccagacc catcactgac catttgcctt acctgtctta gtctgaaatg
1021 taataggaaa gataacggga agatgccagt tgactgaaaa ttcaaagcct ttcaatttga
1081 agtgacctag gtgggaggtg ataaaatttg ttccctttat agttacggag gtggcttagg
1141 tgaattgagt agagggttca ttccaattcc tactgtatag gtgtctgtgt ctcaaaattt
1201 attgtaatca ttggtaccat tggtggcctc aacagaggcc aaggagttct gtgagccctg
1261 gcagcaaaaa acaccttggg gggtgaagct gtcaatgcca ccagttggac ctccatacat
1321 tctgagctaa cccagaatct ttagtcggca gaattaagtg ctggtgtctt tcactggcag
1381 catgaagtta gccaccaagt cctcacaagc cgtgctgctt agttgctcgg tggttatgga
1441 taaactttgc ccagcatgat ttttgggttc atcttatcag ttcccctggt gggcagatac
1501 acagtgttct gcattccaca tgtaagtgaa ttgcaaaaac aaaacaaaac tcactctctt
1561 gtaggtttat ttatgtgtgt gtgaatgtgt attttaatta tgtgtattta actctttaaa
1621 atctcttaga ttttaattta tcctgtaaat ttctgtatat ataatttaat aacagaagcc
1681 tccaccagca acagcatgtg gaagatacag atttgtcatt tctcccttcc gccctccctt
1741 ctttccttcc ttccttccct gtttccttcc ctctttcctt ccttcctcct ggtctgttcc
1801 aaaaactctg aatcatctac attttaaggt attttacctc aaaaatgaat cattgtgtta
1861 ggattctaat tctttataaa gaacttcatg ggcttcaata atgtctagaa agtaaaataa
1921 agaggaatgt taccatcccc agctgccctt atttccagag aaccagacgt ttgtttccca
1981 gttggaaaga agacagttga gcacttcagg atggttttta aatttggtat gagattctct
2041 gccaacacca agctctgagt taactgtgct ttcttctcct ggccctgaca gagcactaca
2101 gcatcaaagt aaatctttgg ggacagtgta gcccatctgc atcctattta atttcttccc
2161 ttctccccac cagtgttgtc acagggctat gttgcttaaa ggtagtctgg ctgctgaatc
2221 cctttctcag ctcagagcag ttttaagatt taattgggaa tacagagaaa caggattgtt
2281 tgagaaccaa aatcaagagg aacagaaatc ttaacttgat ttcatgtgtt agaacattgt
2341 accatgcctc ttctgtatct gtggaagttt cctgtttgac acagggtatc taggaggggc
2401 ggggaagaca tggatagtat aggaagacat taatcctagc attgtcattt atatacatta
2461 atgaaatcct gatgaggacc tgctttttgt ttgttttcct ttgaaaccca gccctattgt
2521 atttgtattt aaaatttgta cacatttgta taataatctg taccttgtgg tatttggtac
2581 tattagagga aaaactttgg attcagacct tcttgcagtt tttatatcat tgttttattt
2641 tgttttttaa ataaattcta gtggtttgat ccaaatccca ttacagttgt ataaagaaat
2701 aaaattttgt acttatatta ttaaaaatca catttttaat atttgt
//