LOCUS AJ006470 2307 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for cartilage-associated protein (CASP).
ACCESSION AJ006470
VERSION AJ006470.1
KEYWORDS cartilage-associated protein; CASP.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2307)
AUTHORS Castagnola P.
JOURNAL Submitted (12-JUN-1998) to the INSDC. Castagnola P., Biotecnologie
in Oncologia, Ist. Naz.le per la Ricerca sul Cancro, L.go R. Benzi
10 Genoa, 16132, ITALY.
REFERENCE 2
AUTHORS Tonachini L., Morello R., Monticone M., Skaug J., Scherer S.W.,
Cancedda R., Castagnola P.
TITLE cDNA cloning, characterization and chromosome mapping of the gene
encoding human cartilage associated protein (CRTAP)
JOURNAL Cytogenet. Cell Genet. 87(3-4), 191-194(1999).
PUBMED 10702664
FEATURES Location/Qualifiers
source 1..2307
/db_xref="H-InvDB:HIT000244111"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="19-23 weeks-old"
/clone="Contig of pCPH2 and I.M.A.G.E. cloneID 1090695"
/tissue_type="fetal brain"
/db_xref="taxon:9606"
CDS 12..1217
/gene="casp"
/product="cartilage-associated protein (CASP)"
/db_xref="GOA:O75718"
/db_xref="H-InvDB:HIT000244111.14"
/db_xref="HGNC:HGNC:2379"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR033212"
/db_xref="UniProtKB/Swiss-Prot:O75718"
/protein_id="CAA07054.1"
/translation="MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPL
ESAYRHALDKYSGEHWAESVGYLEISLRLHRLLRDSEAFCHRNCSAAPQPEPAAGLAS
YPELRLFGGLLRRAHCLKRCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANN
LPKAIAAAHTFLLKHPDDEMMKRNMAYYKSLPGAEDYIKDLETKSYESLFIRAVRAYN
GENWRTSITDMELALPDFFKAFYECLAACEGSREIKDFKDFYLSIADHYVEVLECKIQ
CEENLTPVIGGYPVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQN
LVYYQYHRDTWGLSDEHFQPRPEAVQFFNVTTLQKELYDFAKENIMDDDEGEVVEYVD
DLLELEETS"
sig_peptide 12..89
/gene="casp"
mat_peptide 90..1214
/gene="casp"
/product="cartilage-associated protein (CASP)"
BASE COUNT 545 a 633 c 548 g 578 t
ORIGIN
1 ggcacgaggc gatggagccg gggcgccggg gggccgcggc gctgctagcg ctgctgtgcg
61 tggcctgcgc gctgcgcgcc gggcgcgccc aatacgaacg ctacagcttc cgcagcttcc
121 cacgggacga gctgatgccg ctcgagtcgg cctaccggca cgcgctggac aagtacagcg
181 gcgagcactg ggccgagagc gtgggctacc tggagatcag cctgcggctg caccgcttgc
241 tgcgcgacag cgaggccttc tgccaccgca actgcagcgc cgcgccgcag cccgagcccg
301 ccgccggcct cgccagctat cccgagctgc gcctcttcgg gggcctgctg cgccgcgcgc
361 actgcctcaa gcgctgcaag cagggcctgc cagccttccg ccagtcccag cccagccgcg
421 aggtgctggc ggacttccag cgccgcgagc cctacaagtt cctgcagttc gcttacttca
481 aggcaaataa tctccccaaa gccatcgccg ctgctcacac ctttctactg aagcatcctg
541 atgacgaaat gatgaagagg aacatggcat attataagag cctgcctggt gccgaggact
601 acattaaaga cctggaaacc aagtcatatg aaagcctgtt catccgagca gtgcgggcat
661 acaacggtga gaactggaga acatccatca cagacatgga gctggccctt cccgacttct
721 tcaaagcctt ttacgagtgt ctcgcagcct gcgagggttc cagggagatc aaggacttca
781 aggatttcta cctttccata gcagatcatt atgtagaagt tctggaatgc aaaatacagt
841 gtgaagagaa cctcacccca gttataggag gctatccggt tgagaaattt gtggctacca
901 tgtatcatta cttgcagttt gcctattata agttgaacga cctgaagaat gcagccccct
961 gtgcagtcag ctatctgctc tttgatcaga atgacaaggt catgcagcag aacctggtgt
1021 attaccagta ccacagggac acttggggcc tctcggatga gcacttccag cccagacctg
1081 aagcagttca gttctttaat gtgaccacac tccagaagga gctgtatgac tttgctaagg
1141 aaaatataat ggatgatgat gagggagaag ttgtggaata tgtggatgac ctcttggaac
1201 tggaggagac cagctagccc acagcaacca aagagacttc ctcttggcgt tcaggaaaca
1261 cagattcttt gtccttttcc caacagccca ggctgttgat acctcagagc cttctcttta
1321 ctctccaaag tgaaagggaa gcccccgtct ctctaactgc atgtcatcag gggtgagcct
1381 gcctttccta tcttcacacc tgccacctca tgttcacacc tatctttctc accttttttt
1441 tgagatggag tctcgctctc ttgcccaggc tggagtgcaa tggcacgttc tcagctcact
1501 gcaacctccg cctcttgggt tcaagcaatt ctgctgcatc agcctcccga gtacctggga
1561 ttacaggcat gtgccaccac gcccggctaa ttttgtattt ttaagtaaga gacggggttt
1621 tgccatgttg gccaggctgg tctcgaactc ttgacttcag atgatccatc tgccttgggc
1681 ctcccacagt gctgggatta caggcgtgag ccaccatgcc cggcctcttt ctcaccttta
1741 cacctgtctt cttatcctca catctgtttt cacaccttca tccctgtctt cctcatgttc
1801 acacttgtct tccccatgtt catagctgcc tttcttacca ttttggtttg aagggcagtc
1861 ttctctggct tgtttttttg tttttcccag aaaatcagta ttatttttta aataagaaaa
1921 acattcctag aagatgataa ttgtgaaaac ctcctttggc ttatttgctt ttccagattt
1981 tagtctcctt tctccccatc cgggaaagat kgtggaagac ataggctaaa tttctccagc
2041 ctcacaatgg tcttcacttg gtctgacttg taccaattct agcacccact gaaaaacaag
2101 ttgagtagag agtgtagagt gcagaaatgt ggcttttgcc ccactttgca tctccaaaat
2161 tacaacggtt ggccgatcna aattgaggac aatgnttagt tataagtctc cgagttggaa
2221 aaggaagaaa gccagagctg tctagtttca ttcattcttt cagtaaatat ttattgagta
2281 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//