LOCUS AJ006276 4564 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for transient receptor potential protein TRP6.
ACCESSION AJ006276
VERSION AJ006276.1
KEYWORDS transient receptor potential protein; trp6 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS D'Esposito M., Strazzullo M., Cuccurese M., Rocchi M., D'Urso M.,
Ciccodicola A.
TITLE Identification and assignment of the human transient receptor
potential channel 6 gene TRPC6 to chromosome 11q21-->q22
JOURNAL Cytogenet. Cell Genet. 83(1-2), 46-47(1998).
PUBMED 9925922
REFERENCE 2 (bases 1 to 4564)
AUTHORS D'Esposito M.
JOURNAL Submitted (18-JUN-1998) to the INSDC. International Institute of
Genetics and Biophysics, Via Marconi, 10, Napoli 80125, ITALY.
FEATURES Location/Qualifiers
source 1..4564
/db_xref="H-InvDB:HIT000244100"
/organism="Homo sapiens"
/chromosome="11"
/map="q21-22"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 428..3223
/gene="TRP6"
/product="transient receptor potential protein"
/db_xref="GOA:Q9Y210"
/db_xref="H-InvDB:HIT000244100.15"
/db_xref="HGNC:HGNC:12338"
/db_xref="InterPro:IPR002110"
/db_xref="InterPro:IPR002153"
/db_xref="InterPro:IPR005462"
/db_xref="InterPro:IPR005821"
/db_xref="InterPro:IPR013555"
/db_xref="InterPro:IPR020683"
/db_xref="InterPro:IPR036770"
/db_xref="PDB:5YX9"
/db_xref="UniProtKB/Swiss-Prot:Q9Y210"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAA06943.1"
/translation="MSQSPAFGPRRGSSPRGAAGAAARRNESQDYLLMDSELGEDGCP
QAPLPCYGYYPCFRGSDNRLAHRRQTVLREKGRRLANRGPAYMFSDRSTSLSIEEERF
LDAAEYGNIPVVRKMLEECHSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSR
VGDALLLAISKGYVRIVEAILSHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSH
DVTPIILAAHCQEYEIVHTLLRKGARIERPHDYFCKCNDCNQKQKHDSFSHSRSRINA
YKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLD
LCRNTEEVEAILNGDVETLQSGDHGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWY
ENLSGLRQQTMAVKFLVVLAVAIGLPFLALIYWFAPCSKMGKIMRGPFMKFVAHAASF
TIFLGLLVMNAADRFEGTKLLPNETSTDNAKQLFRMKTSCFSWMEMLIISWVIGMIWA
ECKEIWTQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASKAQSIIDANDTLKD
LTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQ
ISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFTTVEESFKTLFWAI
FGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADV
EWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKLKKWISELFQGHKKGFQED
AEMNKINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFHLNSFNNPPRQYQ
KIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIR
ELGEKLSMEPNQEETNR"
BASE COUNT 1283 a 990 c 1021 g 1270 t
ORIGIN
1 ccgggatctt gacggagagt gcgggggatg aaggcgggag ctgagggctg gagagtctct
61 gttgacatag taactcttca gctccgtctc ccttgctctc cgctcttacg cttcgctacc
121 accagcggcc ccgcctgtgc cctctctgcc cgggcgcccc agacgcatcc tcgcggggtc
181 tcctcggcct gacctgctca ggtcaagatc ctctttgcac ccccttaagt ggtgactttt
241 ccccgggcca gtgggcgagc cacttgcggc gggcgtctgc accccctgct tcaccgtcgt
301 cccctgggca ccggtctgcc caggtccagt tcggccgctg acgcgaaccc tccgcaccgg
361 gtccccgctg gaactgccca ctcggctccc ccgggagcgg ggcccaggcc agtcgggcgt
421 tcccgccatg agccagagcc cggcgttcgg gccccggagg ggcagttctc cccggggcgc
481 tgccggagcc gctgcgcggc gcaacgagag ccaggactat ctgctcatgg actcggagct
541 gggagaagac ggctgcccgc aagccccgct gccttgctac ggctactacc cctgcttccg
601 gggatctgac aacagactgg ctcaccggcg gcagacagtt ctccgtgaga aggggagaag
661 gttagctaat cgaggaccag catacatgtt tagtgatcgc tccacaagcc tatctataga
721 ggaggaacgc tttttggatg cagctgaata tggtaacatc ccagtggtgc ggaagatgtt
781 agaagaatgc cactcactca acgttaactg tgtggattac atgggccaga atgccctaca
841 gttggcagtg gccaatgagc atctggaaat tacagaactt cttctcaaga aagaaaacct
901 ctctcgagtt ggggatgctt tgcttctagc tattagtaaa ggttatgttc ggattgtgga
961 agcaattctc agtcatccgg cttttgctga aggcaagagg ttagcaacca gccctagcca
1021 gtctgaactc cagcaagatg atttttatgc ctatgatgaa gatgggacac ggttctccca
1081 tgatgtgact ccaatcattc tggctgccca ctgccaggaa tatgaaattg tgcataccct
1141 cctgcggaag ggtgctagga ttgaacggcc tcatgattat ttctgcaagt gcaatgactg
1201 caaccagaaa cagaagcatg actcgtttag ccactccaga tctaggatta atgcctataa
1261 aggcctggca agtccggctt acctgtcatt gtctagtgaa gatccagtca tgacggcttt
1321 agaacttagc aatgaactgg cagttctggc caatattgag aaagagttca agaatgacta
1381 caaaaaactg tcaatgcagt gcaaagactt tgttgttgga ctccttgatc tgtgcagaaa
1441 cactgaagaa gtcgaggcca ttctgaatgg ggatgttgaa acgctccaga gtggtgatca
1501 cggtcgccca aatctcagcc gtttaaaact tgccattaaa tatgaagtaa aaaaatttgt
1561 agctcatcca aactgccaac agcaacttct ctccatttgg tatgagaatc tttctggttt
1621 acgacagcag acaatggcgg tcaagttcct tgtggtcctt gctgttgcca ttggactgcc
1681 cttcctggct ctcatttact ggtttgctcc atgcagcaag atggggaaga taatgcgtgg
1741 accattcatg aagtttgtag cacacgcagc ctccttcacc atttttctgg gactgctagt
1801 catgaatgca gctgacagat ttgaaggcac aaaactcctt cctaatgaaa ccagcacaga
1861 taatgcaaaa cagctgttca ggatgaaaac atcctgcttc tcatggatgg agatgctcat
1921 tatatcctgg gtaataggca tgatatgggc tgaatgtaaa gaaatctgga ctcagggccc
1981 caaggaatat ttgtttgagt tgtggaacat gcttgatttt ggtatgttag caattttcgc
2041 agcatcattc attgcgagat tcatggcatt ttggcatgct tccaaagccc agagcatcat
2101 tgacgcaaat gatactttga aggacttgac gaaagtaaca ttgggagaca atgtgaaata
2161 ctacaatttg gccaggataa agtgggaccc ctctgatcct caaataatat ctgaaggtct
2221 ttatgcaatt gctgtagttt taagtttctc taggatagct tatattttac cagcaaatga
2281 aagctttgga cctctgcaga tatcacttgg aagaacagtc aaagacatct tcaagttcat
2341 ggtcatattc attatggtgt ttgtggcctt tatgattgga atgttcaatc tctactccta
2401 ctacattggt gcaaaacaaa atgaagcctt cacaacagtt gaagagagtt ttaagacact
2461 gttctgggct atatttggac tttctgaagt gaaatcagtg gtcatcaact ataaccacaa
2521 attcattgaa aacattggtt acgttcttta tggagtctat aatgttacga tggtcattgt
2581 tttgctaaat atgttaattg ccatgatcaa cagttcattc caggaaattg aggatgacgc
2641 tgatgtggag tggaaatttg caagggccaa actctggttt tcctactttg aggagggcag
2701 aacacttcct gtacccttca atctggtgcc gagtccaaag tccctgtttt atctcttact
2761 gaagcttaaa aaatggattt ctgagctgtt ccagggccat aaaaaaggtt tccaggaaga
2821 tgcagagatg aacaagataa atgaagaaaa gaaacttgga attttaggaa gtcatgaaga
2881 cctttcaaaa ttatcacttg acaaaaaaca ggttgggcac aataaacaac caagtataag
2941 gagctcagaa gatttccatc taaatagttt caataatcct ccaagacaat atcagaaaat
3001 aatgaaaagg ctcattaaaa gatatgtact gcaggcccag atagataagg agagtgatga
3061 agtgaacgaa ggggaactga aggaaattaa gcaggacatc tcaagtctcc gctatgaact
3121 ccttgaagaa aaatctcaga atacagaaga cctagcagaa cttattagag aacttggaga
3181 gaaattatcc atggaaccaa atcaagagga aaccaataga taatgcgaag acttccttag
3241 aaattcatat ttatttgtcc acttgaagcc atattatttt ctgatttatt ttcttaagtg
3301 ccaatgggcc caccttttaa acaagaaaac gttaaataac ttgggccatc ctatcatctg
3361 gagccctagt atctaatttt tttggtgatt aaactccatt gttcagggta aaggctgtag
3421 ataatgagga aaattatgcc cagttgtttg gtgcttgttt tataaactgc tttcttggat
3481 ataactaact cttgtgatga tgtcattgcc atgtagtgtc tgcctgaaaa tgggtcccag
3541 cggacagggg ctgacccacg ttactcccca tgcggttttt cctctgaagt ttatttcagg
3601 ttccttcttg cctgctctgt ggatcccctg ctggggactc ccagctctga aatttgggaa
3661 aaagtagccc atgggccttt agaatgcttt aatcctttct ttagaatgct gtttaaacac
3721 catttaccct acttatccct caatgcacat gattgatacc gttcatacaa aatggtctta
3781 catctatgta aaattttctg attcatctat ttgaaaacat tacacttaac aatgaaaaaa
3841 gtttttcctc cactgaaccc tggaaacatg gtccagtttt gtgtgtgtgc gtgtgtgtaa
3901 atgtgtacac acagacataa agtacttgcc ctatttagtt tgtggctaat gtggacacac
3961 aaaagctctt tatgttataa atttttattg tcactaaaaa attttactgt ctaaataagt
4021 accttttatt ggagaaaaat caaaacccca aacaaacact gtggttgttt ggttccatta
4081 tagcacaatt ttgtgccatt tctgggagca tttacagatg aatccccaca cttagccatt
4141 gaatgtaaag gggaaaaata aggtgagaat ttgtaaatac ttatctgtta ttttcaatat
4201 gttctatcct tctacccaaa tatataaaac aggaatttgc attcatgtgc atttaccaag
4261 aggttgttgt tgttacttac tgatcatgtg aagtggtgtc ttaaacaact aaaagcgatg
4321 aaggttcata tgtttactca aagaccattg gcattcagag gatgctggac attaactgga
4381 actgctactt ccaattcaat aatgggagat ttcaaatgca aatctttaac ttcatcttaa
4441 agatgaaatg gttgcagaaa atctgtttag ctccaacttt ggcttaattt aaatcaaaga
4501 acatttatgt aaccagatca gaaaatacag ctgaaaattt ggaattcgag ctcggtaccc
4561 gggg
//