LOCUS AJ005865 1413 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for putative Sqv-8-like protein, partial.
ACCESSION AJ005865
VERSION AJ005865.1
KEYWORDS Sqv-8-like protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1413)
AUTHORS Herman T.G.
JOURNAL Submitted (13-MAY-1998) to the INSDC. Herman T.G., Biology,
Massachusetts Institute of Technology, 68-447, 77 Massachusetts
Ave, Cambridge, MA 02139, USA.
REFERENCE 3
AUTHORS Herman T., Horvitz H.R.
TITLE Three proteins involved in C. elegans vulval invagination are
similar to components of a glycosylation pathway
JOURNAL Unpublished.
COMMENT Related sequences: R56166; R56054; Z29095 (CDS:R10E11.4)
FEATURES Location/Qualifiers
source 1..1413
/db_xref="H-InvDB:HIT000244051"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="infant"
/clone_lib="1NIB"
/clone="dbest clone ID 40880"
/tissue_type="brain"
/db_xref="taxon:9606"
CDS <1..984
/product="Sqv-8-like protein"
/db_xref="GOA:O94766"
/db_xref="H-InvDB:HIT000244051.12"
/db_xref="HGNC:HGNC:923"
/db_xref="InterPro:IPR005027"
/db_xref="InterPro:IPR029044"
/db_xref="PDB:1FGG"
/db_xref="PDB:1KWS"
/db_xref="PDB:3CU0"
/db_xref="UniProtKB/Swiss-Prot:O94766"
/inference="non-experimental evidence, no additional
details recorded"
/protein_id="CAA06742.1"
/translation="FLAYFLVSIAGLLYALVQLGQPCDCLPPLRAAAEQLRQKDLRIS
QLQAELRRPPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLL
VEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWL
RGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRF
EGPQVQDGRVVGFHTAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSL
LSHLVDPKDLEPRAANCTRVLVWHTRTEKPKMKQEEQLQRQGRGSDPAIEV"
BASE COUNT 269 a 442 c 439 g 263 t
ORIGIN
1 tttctcgcct acttcctggt gtcgatcgcc ggcctcctct acgcgctggt acagctcggc
61 cagccatgtg actgccttcc tcccctgcgg gcagcagccg agcagctacg gcagaaggat
121 ctgaggattt cccagctgca agcggaactc cgacggccac cccctgcccc tgcccagccc
181 cctgaacccg aggccctgcc tactatctat gttgttaccc ccacctatgc caggctggta
241 cagaaggcag agctggtacg actgtcccag acactgagcc tggtgccccg gctgcattgg
301 ctgctggtgg aggatgctga gggtcccacc ccgctggtct cagggctgct ggctgcctct
361 ggcctcctct tcacacacct ggtggtcctc acgcccaaag cccagcggct tcgggagggc
421 gagcctggct gggttcatcc ccgtggtgtc gagcagcgga acaaggccct ggactggctc
481 cggggcagag ggggtgctgt gggtggggag aaggacccac caccaccagg gacccaagga
541 gtcgtctact ttgctgacga tgacaacacc tacagccggg agctgtttga ggagatgcgc
601 tggacccgtg gtgtctcagt gtggcctgtg gggctggtgg gcggcctgcg attcgagggc
661 cctcaggtac aggacggccg ggtagtgggc ttccacacag catgggagcc cagcaggccc
721 ttccctgtgg atatggctgg atttgccgtg gccctgccct tgctgttaga taagcccaat
781 gcccaatttg attccaccgc tccccggggc cacctggaga gcagtcttct gagccacctt
841 gtggatccca aggacctgga gccacgggct gccaactgca ctcgggtact ggtgtggcat
901 actcggacag agaagcccaa gatgaagcag gaggagcagc tgcagcggca gggccggggc
961 tcagacccag caattgaggt gtgatggcgg ccccacccca actaccacct cttttcaggc
1021 acagaccttg tgggactggg ccccaggcct gcccaggatg tggttttcca agtcctgacc
1081 cttggagcca gaagtggccc ctctgcccct ccaggcccag ggcatggtcc tgctgcttca
1141 cccctcccct agcctgccgt gtggcactgc ccacaggctg gggacaagca gcccttgtgt
1201 tgagtcaggt tggccctgtc tagggtggaa cagaaggaca gatggaccca ggagggaggg
1261 cagctgagta actgggtaac ttattggggc tgggcatgca ctggggggct ggaggagctg
1321 ggctggaccc ttcccacctg agcatgctga cccccttcct acctccagaa taaagaatct
1381 caacctggaa aaaaaaaaaa aaaaaaaaaa aaa
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