LOCUS AJ002955 3723 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for xeroderma pigmentosum complementation group E
protein.
ACCESSION AJ002955
VERSION AJ002955.1
KEYWORDS Xeroderma Pigmentosum Group E Complementing protein, xpcE gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3723)
AUTHORS Chao C.K.
JOURNAL Submitted (17-NOV-1997) to the INSDC. Chao C.-K., Biochemistry,
Chang Gung University, Taoyuan, Taiwan 333, R.O.C.
REFERENCE 2
AUTHORS Huang S.L., Lin-Chao S., Chao C.K.
TITLE Molecular cloning and characterization of human XPE protein: a
component of UV-damaged DNA recognition activity.
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..3723
/db_xref="H-InvDB:HIT000243989"
/organism="Homo sapiens"
/mol_type="mRNA"
/tissue_type="placenta"
/db_xref="taxon:9606"
CDS 110..3532
/gene="xpcE"
/product="Xeroderma Pigmentosum Group E Complementing
protein"
/db_xref="GOA:Q16531"
/db_xref="H-InvDB:HIT000243989.13"
/db_xref="HGNC:HGNC:2717"
/db_xref="InterPro:IPR004871"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR031297"
/db_xref="InterPro:IPR036322"
/db_xref="PDB:2B5L"
/db_xref="PDB:2B5M"
/db_xref="PDB:2B5N"
/db_xref="PDB:2HYE"
/db_xref="PDB:3E0C"
/db_xref="PDB:3EI1"
/db_xref="PDB:3EI2"
/db_xref="PDB:3EI3"
/db_xref="PDB:3EI4"
/db_xref="PDB:3I7H"
/db_xref="PDB:3I7K"
/db_xref="PDB:3I7L"
/db_xref="PDB:3I7N"
/db_xref="PDB:3I7O"
/db_xref="PDB:3I7P"
/db_xref="PDB:3I89"
/db_xref="PDB:3I8C"
/db_xref="PDB:3I8E"
/db_xref="PDB:4A08"
/db_xref="PDB:4A09"
/db_xref="PDB:4A0A"
/db_xref="PDB:4A0B"
/db_xref="PDB:4A0K"
/db_xref="PDB:4A0L"
/db_xref="PDB:4A11"
/db_xref="PDB:4CI1"
/db_xref="PDB:4CI2"
/db_xref="PDB:4CI3"
/db_xref="PDB:4E54"
/db_xref="PDB:4E5Z"
/db_xref="PDB:4TZ4"
/db_xref="PDB:5FQD"
/db_xref="PDB:5HXB"
/db_xref="PDB:5JK7"
/db_xref="PDB:5V3O"
/db_xref="PDB:6BN7"
/db_xref="PDB:6BN8"
/db_xref="PDB:6BN9"
/db_xref="PDB:6BNB"
/db_xref="PDB:6BOY"
/db_xref="PDB:6DSZ"
/db_xref="PDB:6FCV"
/db_xref="PDB:6H0F"
/db_xref="PDB:6H0G"
/db_xref="PDB:6R8Y"
/db_xref="PDB:6R8Z"
/db_xref="PDB:6R90"
/db_xref="PDB:6R91"
/db_xref="PDB:6R92"
/db_xref="UniProtKB/Swiss-Prot:Q16531"
/protein_id="CAA05770.1"
/translation="MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVV
TAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIIT
RAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE
ELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASM
VIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDM
EGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLV
KLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRN
GIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG
FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQV
VVAVGRALYYLQIHPQELRQISHTGMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA
RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS
DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPL
NSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRI
EVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHT
FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG
KLQTVAEKEVKGDVYSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYNNIMALYL
KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF
NLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLF
GTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGF
IDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH"
BASE COUNT 883 a 962 c 1001 g 877 t
ORIGIN
1 cagcggcagt ggagttcgct gcgcgctgtt gggggccacc tgtcttttcg cttgtgtccc
61 tctttctagt gtcgcgctcg agtcccgacg ggccgctcca agcctcgaca tgtcgtacaa
121 ctacgtggta acggcccaga agcccaccgc cgtgaacggc tgcgtgaccg gacactttac
181 ttcggccgaa gacttaaacc tgttgattgc caaaaacacg agattagaga tctatgtggt
241 caccgccgag gggcttcggc ccgtcaaaga ggtgggcatg tatgggaaga ttgcggtcat
301 ggagcttttc aggcccaagg gggagagcaa ggacctgctg tttatcttga cagcgaagta
361 caatgcctgc atcctggagt ataaacagag tggcgagagc attgatatca ttacgcgagc
421 ccatggcaat gtccaggacc gcattggccg cccctcagag accggcatta ttggcatcat
481 tgaccctgag tgccggatga ttggcctgcg tctctatgat ggccttttca aggttattcc
541 actagatcgc gataataaag aactcaaggc cttcaacatc cgcctggagg agctgcatgt
601 cattgatgtc aagttcctat atggttgcca agcacctact atttgctttg tctaccagga
661 ccctcagggg cggcacgtaa aaacctatga ggtgtctctc cgagaaaagg aattcaataa
721 gggcccttgg aaacaggaaa atgtcgaagc tgaagcttcc atggtgatcg cagtcccaga
781 gccctttggg ggggccatca tcattggaca ggagtcaatc acctatcaca atggtgacaa
841 atacctggct attgcccctc ctatcatcaa gcaaagcacg attgtgtgcc acaatcgagt
901 ggaccctaat ggctcaagat acctgctggg agacatggaa ggccggctct tcatgctgct
961 tttggagaag gaggaacaga tggatggcac cgtcactctc aaggatctcc gtgtagaact
1021 ccttggagag acctctattg ctgagtgctt gacatacctt gataatggtg ttgtgtttgt
1081 cgggtctcgc ctgggtgact cccagcttgt gaagctcaac gttgacagta atgaacaagg
1141 ctcctatgta gtggccatgg aaacctttac caacttagga cccattgtcg atatgtgcgt
1201 ggtggacctg gagaggcagg ggcaggggca gctggtcact tgctctgggg ctttcaagga
1261 aggttctttg cggatcatcc ggaatggaat tggaatccac gagcatgcca gcattgactt
1321 accaggcatc aaaggattat ggccactgcg gtctgaccct aatcgtgaga ctgatgacac
1381 tttggtgctc tcttttgtgg gccagacaag agttctcatg ttaaatggag aggaggtaga
1441 agaaaccgaa ctgatgggtt tcgtggatga tcagcagact ttcttctgtg gcaacgtggc
1501 tcatcagcag cttatccaga tcacttcagc atcggtgagg ttggtctctc aagaacccaa
1561 agctctggtc agtgaatgga aggagcctca ggccaagaac atcagtgtgg cctcctgcaa
1621 tagcagccag gtggtggtgg ctgtaggcag ggccctctac tatctgcaga tccatcctca
1681 ggagctccgg cagatcagcc acacagggat ggaacatgaa gtggcttgct tggacatcac
1741 cccattagga gacagcaatg gactgtcccc tctttgtgcc attggcctct ggacggacat
1801 ctcggctcgt atcttgaagt tgccctcttt tgaactactg cacaaggaga tgctgggtgg
1861 agagatcatt cctcgctcca tcctgatgac cacctttgag agtagccatt acctcctttg
1921 tgccttggga gatggagcgc ttttctactt tgggctcaac attgagacag gtctgttgag
1981 cgaccgtaag aaggtgactt tgggcaccca gcccaccgta ttgaggactt ttcgttctct
2041 ttctaccacc aacgtctttg cttgttctga ccgccccact gtcatctata gcagcaacca
2101 caaattggtc ttctcaaatg tcaacctcaa ggaagtgaac tacatgtgtc ccctcaattc
2161 agatggctat cctgacagcc tggcgctggc caacaatagc accctcacca ttggcaccat
2221 cgatgagatc cagaagctgc acattcgcac agttcccctc tatgagtctc caaggaagat
2281 ctgctaccag gaagtgtccc agtgtttcgg ggtcctctcc agccgcattg aagtccaaga
2341 cacgagtggg ggcacgacag ccttgaggcc cagcgctagc acccaggctc tgtccagcag
2401 tgtaagctcc agcaagctgt tctccagcag cactgctcct catgagacct cctttggaga
2461 agaggtggag gtgcataacc tacttatcat tgaccaacac acctttgaag tgcttcatgc
2521 ccaccagttt ctgcagaatg aatatgccct cagtctggtt tcctgcaagc tgggcaaaga
2581 ccccaacact tacttcattg tgggcacagc aatggtgtat cctgaagagg cagagcccaa
2641 gcagggtcgc attgtggtct ttcagtattc ggatggaaaa ctacagactg tggctgaaaa
2701 ggaagtgaaa ggggacgtgt actctatggt ggaatttaac gggaagctgt tagccagcat
2761 caatagcacg gtgcggctct atgagtggac aacagagaag gacgtgcgca ctgagtgcaa
2821 ccactacaac aacatcatgg ccctctacct gaagaccaag ggcgacttca tcctggtggg
2881 cgaccttatg cgctcagtgc tgctgcttgc ctacaagccc atggaaggaa actttgaaga
2941 gattgctcga gactttaatc ccaactggat gagtgctgtg gaaatcttgg atgatgacaa
3001 ttttctgggg gctgaaaatg cctttaactt gtttgtgtgt caaaaggata gcgctgccac
3061 cactgacgag gagcggcagc acctccagga ggttggtctt ttccacctgg gcgagtttgt
3121 caatgtcttt tgccacggct ctctggtaat gcagaatctg ggtgagactt ccacccccac
3181 acaaggctcg gtgctcttcg gcacggtcaa cggcatgata gggctggtga cctcactgtc
3241 agagagctgg tacaacctcc tgctggacat gcagaatcga ctcaataaag tcatcaaaag
3301 tgtggggaag atcgagcact ccttctggag atcctttcac accgagcgga agacagaacc
3361 agccacaggt ttcatcgacg gtgacttgat tgagagtttc ctggatatta gccgccccaa
3421 gatgcaggag gtggtggcaa acctacagta tgacgatggc agcggtatga agcgagaggc
3481 cactgcagac gacctcatca aggttgtgga ggagctaact cggatccatt agccaagggc
3541 agggggcccc tttgctgacc ctccccaaag gctttgccct gctgccctcc ccctcctctc
3601 caccatcgtc ttcttggcca tgggaggcct ttccctaagc cagctgcccc cagagccaca
3661 gttcccctat gtggaagtgg ggcgggcttc atagagactt gggaatgagc tgaaggtgaa
3721 aca
//