LOCUS AI478629 812 bp mRNA linear EST 06-JAN-2011 DEFINITION tm54f01.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2161945 3', mRNA sequence. ACCESSION AI478629 VERSION AI478629.1 DBLINK BioSample: SAMN00156072 KEYWORDS EST. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 812) CONSRTM NCI-CGAP http://www.ncbi.nlm.nih.gov/ncicgap TITLE National Cancer Institute, Cancer Genome Anatomy Project (CGAP), Tumor Gene Index JOURNAL Unpublished COMMENT Contact: Robert Strausberg, Ph.D. Email: cgapbs-r@mail.nih.gov Tissue Procurement: Christopher Moskaluk, M.D., Ph.D., Michael R. Emmert-Buck, M.D., Ph.D. cDNA Library Preparation: M. Bento Soares, Ph.D. cDNA Library Arrayed by: Greg Lennon, Ph.D. DNA Sequencing by: Washington University Genome Sequencing Center Clone distribution: NCI-CGAP clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: www-bio.llnl.gov/bbrp/image/image.html Insert Length: 865 Std Error: 0.00 Seq primer: -40UP from Gibco High quality sequence stop: 473. FEATURES Location/Qualifiers source 1..812 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2161945" /clone_lib="SAMN00156072 NCI_CGAP_Kid11" /lab_host="DH10B" /note="Organ: kidney; Vector: pT7T3D-PacI; Site_1: Not I; Site_2: Eco RI; Plasmid DNA from the normalized library NCI_CGAP_Kid3 was prepared, and ss circles were made in vitro. Following HAP purification, this DNA was used as tracer in a subtractive hybridization reaction. The driver was PCR-amplified cDNAs from a pool of 5,000 clones made from the same library (cloneIDs 1322376-1323911, 1456007-1456775, and 1500552-1502855). Subtraction by Bento Soares and M. Fatima Bonaldo." BASE COUNT 187 a 183 c 174 g 264 t ORIGIN 1 aaaaagatac aagtacaata taatttgttt ggaatttcaa aggtgctttt ttctcttctc 61 ttttcccttt acctcaaaag ttataaatac ttttgaagca gcatgtattg ttgcactttt 121 gattttttgt tgtacagtta atgaacttga gagtctggat gactggtgat catctatttg 181 gccttcccat tcttttgttt cttcttcttt gattagtaaa ggttttccta aggtttggcc 241 aacaaggtta cagacttctt gagctttgcg ccacgcattc tcaacagcaa caagacaggc 301 ttgccgtcga agattctcaa cagaacctgg agtatgatag aactggggtg ggctgatgac 361 aacagagcta tctagctttt caacaagaaa gttacaaata ttttgcattt ttccaaattc 421 agtaaatgta atgcagacct ctgcttccat gtgataagca ttttccactc tcctaaaatc 481 ctttgtcaca gttatatttt ctgcctgcac gcnctgctgc tggaggctct gcgtgatgta 541 atctagacgg cgacaaacgc tctttttgcc tcggctgccg cctccttgtg ctgtcactcg 601 caccaccacc tgcgccgtca ggcccgcaga acttctgggt gccgctactt gcactngcgg 661 tacagttgng ctgtgtgaga gagggtgcta gccggagcgc tctttcctga gcagtgtctc 721 ccgctcgtca gcaggaacag ctgtgcgatc ttgctgaggc aattccttan tgtgattatc 781 gtatattata tgttctgggg atgtatcgtc aa //