LOCUS AF548371 1730 bp mRNA linear HUM 20-DEC-2005 DEFINITION Homo sapiens basigin long isoform (BSG) mRNA, complete cds; alternatively spliced. ACCESSION AF548371 VERSION AF548371.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1730) AUTHORS Ochrietor,J.D., Moroz,T.P., van Ekeris,L., Clamp,M.F., Jefferson,S.C., deCarvalho,A.C., Fadool,J.M., Wistow,G., Muramatsu,T. and Linser,P.J. TITLE Retina-specific expression of 5A11/Basigin-2, a member of the immunoglobulin gene superfamily JOURNAL Invest. Ophthalmol. Vis. Sci. 44 (9), 4086-4096 (2003) PUBMED 12939332 REFERENCE 2 (bases 1 to 1730) AUTHORS Ochrietor,J.D., Moroz,T.P., van Ekeris,L., Clamp,M.F., Jefferson,S.C., deCarvalho,A.C., Fadool,J.M., Wistow,G.J., Muramatsu,T. and Linser,P.J. TITLE A novel retina specific variant of Basigin JOURNAL Unpublished REFERENCE 3 (bases 1 to 1730) AUTHORS Wistow,G. TITLE Direct Submission JOURNAL Submitted (23-SEP-2002) MSF, NEI, 6/331, NIH, Bethesda, MD 20892, USA FEATURES Location/Qualifiers source 1..1730 /db_xref="H-InvDB:HIT000081513" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="19" /map="19p13.3" /tissue_type="retina" gene 1..1730 /gene="BSG" CDS 61..1218 /gene="BSG" /note="retinal glycoprotein; retina-specific isoform; contains additional immunoglobulin like domain; alternatively spliced" /codon_start=1 /product="basigin long isoform" /protein_id="AAN40694.1" /translation="MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHC EAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEED TGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLN DSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLH GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFV SSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAE VLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS" BASE COUNT 323 a 551 c 530 g 326 t ORIGIN 1 gcggccgcgg gcggcggcgg cagcggttgg aggttgtagg accggcgagg aataggaatc 61 atggcggctg cgctgttcgt gctgctggga ttcgcgctgc tgggcaccca cggagcctcc 121 ggggctgccg gcttcgtcca ggcgccgctg tcccagcaga ggtgggtggg gggcagtgtg 181 gagctgcact gcgaggccgt gggcagcccg gtgcccgaga tccagtggtg gtttgaaggg 241 cagggtccca acgacacctg ctcccagctc tgggacggcg cccggctgga ccgcgtccac 301 atccacgcca cctaccacca gcacgcggcc agcaccatct ccatcgacac gctcgtggag 361 gaggacacgg gcacttacga gtgccgggcc agcaacgacc cggatcgcaa ccacctgacc 421 cgggcgccca gggtcaagtg ggtccgcgcc caggcagtcg tgctagtcct ggaacccggc 481 acagtcttca ctaccgtaga agaccttggc tccaagatac tcctcacctg ctccttgaat 541 gacagcgcca cagaggtcac agggcaccgc tggctgaagg ggggcgtggt gctgaaggag 601 gacgcgctgc ccggccagaa aacggagttc aaggtggact ccgacgacca gtggggagag 661 tactcctgcg tcttcctccc cgagcccatg ggcacggcca acatccagct ccacgggcct 721 cccagagtga aggccgtgaa gtcgtcagaa cacatcaacg agggggagac ggccatgctg 781 gtctgcaagt cagagtccgt gccacctgtc actgactggg cctggtacaa gatcactgac 841 tctgaggaca aggccctcat gaacggctcc gagagcaggt tcttcgtgag ttcctcgcag 901 ggccggtcag agctacacat tgagaacctg aacatggagg ccgaccccgg ccagtaccgg 961 tgcaacggca ccagctccaa gggctccgac caggccatca tcacgctccg cgtgcgcagc 1021 cacctggccg ccctctggcc cttcctgggc atcgtggctg aggtgctggt gctggtcacc 1081 atcatcttca tctacgagaa gcgccggaag cccgaggacg tcctggatga tgacgacgcc 1141 ggctctgcac ccctgaagag cagcgggcag caccagaatg acaaaggcaa gaacgtccgc 1201 cagaggaact cttcctgagg caggtggccc gaggacgctc cctgctccac gtctgcgccg 1261 ccgccggagt ccactcccag tgcttgcaag attccaagtt ctcacctctt aaagaaaacc 1321 caccccgtag attcccatca tacacttcct tcttttttaa aaaagttggg ttttctccat 1381 tcaggattct gttccttagg attttttcct tctgaagtgt ttcacgagag cccgggagct 1441 gctgccctgc ggccccgtct gtggctttca gcctctgggt ctgagtcatg gccgggtggg 1501 cggcacagcc ttctccactg gccggagtca gtgccaggtc cttgcccttt gtggaaagtc 1561 acaggtcaca cgaggggccc cgtgtcctgc ctgtctgaag ccaatgctgt ctggttgcgc 1621 catttttgtg cttttatgtt taattttatg agggccacgg gtctgtgttc gactcagcct 1681 cagggacgac tctgacctct tggccacaga ggactcactt gcccacaccg //