LOCUS       AF533937                 551 bp    mRNA    linear   HUM 24-JUL-2016
DEFINITION  Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0101
            allele, partial cds.
ACCESSION   AF533937
VERSION     AF533937.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M.
  TITLE     A new splicing acceptor site and poly(A)+ sequence signal within
            DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the
            extraordinary diversity of mRNA isoforms
  JOURNAL   Immunogenetics 57 (3-4), 182-188 (2005)
   PUBMED   15900489
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M.
  TITLE     HLA DQA1 gene generates multiple transcripts by alternative
            splicing and polyadenylation of the 3' untranslated region
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 551)
  AUTHORS   Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique
            Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint
            Denis, Ile de la Reunion 97715, France
FEATURES             Location/Qualifiers
     source          1..551
                     /db_xref="H-InvDB:HIT000081398"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q21.3"
                     /cell_type="B lymphoblastoid cell"
     gene            <1..551
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0101"
     CDS             <1..45
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0101"
                     /note="DQ alpha; unspliced isoform cleaved at CA
                     dinucleotide downstream of poly(A1) sequence signal"
                     /codon_start=1
                     /product="MHC class II antigen"
                     /protein_id="AAM94851.1"
                     /translation="GLRSVGASRHQGPL"
     3'UTR           46..551
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0101"
     regulatory      523..528
                     /regulatory_class="polyA_signal_sequence"
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0101"
     polyA_site      551
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0101"
BASE COUNT          136 a          133 c          124 g          158 t
ORIGIN      
        1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag
       61 ggaaggtaag attgagactg gttacagttg aagcggcagt atgaaaggaa ggaaagtggg
      121 agggcgttgt ggacatgaat gtggttgaaa gttgtagggg aattgggaag tggcatgatg
      181 atgacacagg aggcccctcg gacccatcga tctcatgtct gccctgttgc aggtgcatcg
      241 ccatctacag gagcagaaga gtggacttgc tacatgacct agcactattc tctggcccga
      301 tttatcatat cccttttctc ctccaaatat ttctcctctc accttttctc tgggacttaa
      361 gctgctatat cccctcagag ctcacaaatg tctttacatt ctttccctga cctcctgatt
      421 ttttttttct tttctcaaat gttacctaca aagacatgcc tggggtaagc cacccggcta
      481 cctaattcct cagtaacctc catctaaaat ctccaaggaa gcaataaatt ccttttatga
      541 gatctatgtc a
//