LOCUS AF533937 551 bp mRNA linear HUM 24-JUL-2016 DEFINITION Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0101 allele, partial cds. ACCESSION AF533937 VERSION AF533937.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 551) AUTHORS Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M. TITLE A new splicing acceptor site and poly(A)+ sequence signal within DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the extraordinary diversity of mRNA isoforms JOURNAL Immunogenetics 57 (3-4), 182-188 (2005) PUBMED 15900489 REFERENCE 2 (bases 1 to 551) AUTHORS Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M. TITLE HLA DQA1 gene generates multiple transcripts by alternative splicing and polyadenylation of the 3' untranslated region JOURNAL Unpublished REFERENCE 3 (bases 1 to 551) AUTHORS Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M. TITLE Direct Submission JOURNAL Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint Denis, Ile de la Reunion 97715, France FEATURES Location/Qualifiers source 1..551 /db_xref="H-InvDB:HIT000081398" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="6" /map="6q21.3" /cell_type="B lymphoblastoid cell" gene <1..551 /gene="HLA-DQA1" /allele="HLA-DQA1*0101" CDS <1..45 /gene="HLA-DQA1" /allele="HLA-DQA1*0101" /note="DQ alpha; unspliced isoform cleaved at CA dinucleotide downstream of poly(A1) sequence signal" /codon_start=1 /product="MHC class II antigen" /protein_id="AAM94851.1" /translation="GLRSVGASRHQGPL" 3'UTR 46..551 /gene="HLA-DQA1" /allele="HLA-DQA1*0101" regulatory 523..528 /regulatory_class="polyA_signal_sequence" /gene="HLA-DQA1" /allele="HLA-DQA1*0101" polyA_site 551 /gene="HLA-DQA1" /allele="HLA-DQA1*0101" BASE COUNT 136 a 133 c 124 g 158 t ORIGIN 1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag 61 ggaaggtaag attgagactg gttacagttg aagcggcagt atgaaaggaa ggaaagtggg 121 agggcgttgt ggacatgaat gtggttgaaa gttgtagggg aattgggaag tggcatgatg 181 atgacacagg aggcccctcg gacccatcga tctcatgtct gccctgttgc aggtgcatcg 241 ccatctacag gagcagaaga gtggacttgc tacatgacct agcactattc tctggcccga 301 tttatcatat cccttttctc ctccaaatat ttctcctctc accttttctc tgggacttaa 361 gctgctatat cccctcagag ctcacaaatg tctttacatt ctttccctga cctcctgatt 421 ttttttttct tttctcaaat gttacctaca aagacatgcc tggggtaagc cacccggcta 481 cctaattcct cagtaacctc catctaaaat ctccaaggaa gcaataaatt ccttttatga 541 gatctatgtc a //