LOCUS AF533930 425 bp mRNA linear HUM 24-JUL-2016 DEFINITION Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0102 allele, partial cds. ACCESSION AF533930 VERSION AF533930.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 425) AUTHORS Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M. TITLE A new splicing acceptor site and poly(A)+ sequence signal within DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the extraordinary diversity of mRNA isoforms JOURNAL Immunogenetics 57 (3-4), 182-188 (2005) PUBMED 15900489 REFERENCE 2 (bases 1 to 425) AUTHORS Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M. TITLE HLA DQA1 gene generates multiple transcripts by alternative splicing and polyadenylation of the 3' untranslated region JOURNAL Unpublished REFERENCE 3 (bases 1 to 425) AUTHORS Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M. TITLE Direct Submission JOURNAL Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint Denis, Ile de la Reunion 97715, France FEATURES Location/Qualifiers source 1..425 /db_xref="H-InvDB:HIT000081391" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="6" /map="6q21.3" /cell_type="B lymphoblastoid cell" gene <1..425 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" CDS <1..45 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" /note="DQ alpha; isoform spliced at acceptor 3 site and cleaved at CA dinucleotide downstream of poly(A3) sequence signal" /codon_start=1 /product="MHC class II antigen" /protein_id="AAM94844.1" /translation="GLRSVGASRHQGPL" 3'UTR 46..425 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" regulatory 404..409 /regulatory_class="polyA_signal_sequence" /gene="HLA-DQA1" /allele="HLA-DQA1*0102" polyA_site 425 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" BASE COUNT 129 a 92 c 78 g 126 t ORIGIN 1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag 61 ggaagggctg actgaaacta tggctaataa ttggggtact cttatgtttc aatccaattt 121 aacctcattt cccagatcat ttttcatgtc cagtaacaca gaagccacca agtacagtat 181 agcctgataa tatgttgatt tcttagctga cattaatatt tcttgcttcc ttgtgttccc 241 acccttggca ctgccaccca cccctcaatt caggcaacaa tgaaattaat ggataccgtc 301 tgcccttggc ccagaattgt tatagcaaaa attttagaac caaaaaataa gtctgtacta 361 atttcaatgt ggcttttaaa agtatgacag agaaataagt taggataaag gaaatttgaa 421 tctca //