LOCUS       AF533930                 425 bp    mRNA    linear   HUM 24-JUL-2016
DEFINITION  Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0102
            allele, partial cds.
ACCESSION   AF533930
VERSION     AF533930.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M.
  TITLE     A new splicing acceptor site and poly(A)+ sequence signal within
            DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the
            extraordinary diversity of mRNA isoforms
  JOURNAL   Immunogenetics 57 (3-4), 182-188 (2005)
   PUBMED   15900489
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M.
  TITLE     HLA DQA1 gene generates multiple transcripts by alternative
            splicing and polyadenylation of the 3' untranslated region
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 425)
  AUTHORS   Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique
            Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint
            Denis, Ile de la Reunion 97715, France
FEATURES             Location/Qualifiers
     source          1..425
                     /db_xref="H-InvDB:HIT000081391"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q21.3"
                     /cell_type="B lymphoblastoid cell"
     gene            <1..425
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     CDS             <1..45
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
                     /note="DQ alpha; isoform spliced at acceptor 3 site and
                     cleaved at CA dinucleotide downstream of poly(A3) sequence
                     signal"
                     /codon_start=1
                     /product="MHC class II antigen"
                     /protein_id="AAM94844.1"
                     /translation="GLRSVGASRHQGPL"
     3'UTR           46..425
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     regulatory      404..409
                     /regulatory_class="polyA_signal_sequence"
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     polyA_site      425
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
BASE COUNT          129 a           92 c           78 g          126 t
ORIGIN      
        1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag
       61 ggaagggctg actgaaacta tggctaataa ttggggtact cttatgtttc aatccaattt
      121 aacctcattt cccagatcat ttttcatgtc cagtaacaca gaagccacca agtacagtat
      181 agcctgataa tatgttgatt tcttagctga cattaatatt tcttgcttcc ttgtgttccc
      241 acccttggca ctgccaccca cccctcaatt caggcaacaa tgaaattaat ggataccgtc
      301 tgcccttggc ccagaattgt tatagcaaaa attttagaac caaaaaataa gtctgtacta
      361 atttcaatgt ggcttttaaa agtatgacag agaaataagt taggataaag gaaatttgaa
      421 tctca
//