LOCUS       AF533914                 384 bp    mRNA    linear   HUM 24-JUL-2016
DEFINITION  Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0103
            allele, partial cds.
ACCESSION   AF533914
VERSION     AF533914.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M.
  TITLE     A new splicing acceptor site and poly(A)+ sequence signal within
            DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the
            extraordinary diversity of mRNA isoforms
  JOURNAL   Immunogenetics 57 (3-4), 182-188 (2005)
   PUBMED   15900489
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M.
  TITLE     HLA DQA1 gene generates multiple transcripts by alternative
            splicing and polyadenylation of the 3' untranslated region
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 384)
  AUTHORS   Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique
            Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint
            Denis, Ile de la Reunion 97715, France
FEATURES             Location/Qualifiers
     source          1..384
                     /db_xref="H-InvDB:HIT000081375"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q21.3"
                     /cell_type="B lymphoblastoid cell"
     gene            <1..384
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0103"
     CDS             <1..45
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0103"
                     /note="DQ alpha; isoform spliced at acceptor 1 site and
                     cleaved at CA dinucleotide downstream of poly(A1) sequence
                     signal"
                     /codon_start=1
                     /product="MHC class II antigen"
                     /protein_id="AAM94828.1"
                     /translation="GLRSVGASRHQGPL"
     3'UTR           46..384
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0103"
     regulatory      356..361
                     /regulatory_class="polyA_signal_sequence"
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0103"
     polyA_site      384
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0103"
BASE COUNT           92 a          110 c           63 g          119 t
ORIGIN      
        1 ggcctgcgtt cagttggtgc ttccagacac caagggccct tgtgaatccc atcctggaag
       61 ggaaggtgca tcgccatcta caggaacaga agaatggact tgctaaatga cctagcacta
      121 ttctctggcc cgatttatca tatccctttt ctcctccaaa tgtttctcct ctcacctttt
      181 ctctgggact taagctgcta tatcccctca gagctcacaa atgcctttac attctttccc
      241 tgacctcctg attttttttt tcttttctca aatgttacct acaaagacat gcctggggta
      301 agccacccgg ctccctaatt cctcagtaac ctccatctaa aatctccaag gaagcaataa
      361 attcctttta tgagatctat gtca
//