LOCUS       AF533913                 383 bp    mRNA    linear   HUM 24-JUL-2016
DEFINITION  Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0102
            allele, partial cds.
ACCESSION   AF533913
VERSION     AF533913.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M.
  TITLE     A new splicing acceptor site and poly(A)+ sequence signal within
            DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the
            extraordinary diversity of mRNA isoforms
  JOURNAL   Immunogenetics 57 (3-4), 182-188 (2005)
   PUBMED   15900489
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M.
  TITLE     HLA DQA1 gene generates multiple transcripts by alternative
            splicing and polyadenylation of the 3' untranslated region
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 383)
  AUTHORS   Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique
            Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint
            Denis, Ile de la Reunion 97715, France
FEATURES             Location/Qualifiers
     source          1..383
                     /db_xref="H-InvDB:HIT000081374"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q21.3"
                     /cell_type="B lymphoblastoid cell"
     gene            <1..383
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     CDS             <1..45
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
                     /note="DQ alpha; isoform spliced at acceptor 1 site and
                     cleaved at CA dinucleotide downstream of poly(A1) sequence
                     signal"
                     /codon_start=1
                     /product="MHC class II antigen"
                     /protein_id="AAM94827.1"
                     /translation="GLRSVGASRHQGPL"
     3'UTR           46..383
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     regulatory      355..360
                     /regulatory_class="polyA_signal_sequence"
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     polyA_site      383
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
BASE COUNT           91 a          112 c           64 g          116 t
ORIGIN      
        1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag
       61 ggaaggtgca tcgccatcta caggagcaga agaatggact tgctaaatga cctagcacta
      121 ttctctggcc cgatttatca tatccctttt ctcctccaaa tattcctcct ctcacctttt
      181 ctctgggact taagctgcta tatcccctca gagctcacaa atgcctttac attctttccc
      241 tgacctcctg attttttttt ccttttctca atggtaccta cccagacatg cctggggtaa
      301 gccacccggc tacctaattc ctcagtaacc tccatctaaa atctccaagg aagcaataaa
      361 ttccttttat gagatctatg tca
//