LOCUS AF533913 383 bp mRNA linear HUM 24-JUL-2016 DEFINITION Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0102 allele, partial cds. ACCESSION AF533913 VERSION AF533913.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 383) AUTHORS Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M. TITLE A new splicing acceptor site and poly(A)+ sequence signal within DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the extraordinary diversity of mRNA isoforms JOURNAL Immunogenetics 57 (3-4), 182-188 (2005) PUBMED 15900489 REFERENCE 2 (bases 1 to 383) AUTHORS Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M. TITLE HLA DQA1 gene generates multiple transcripts by alternative splicing and polyadenylation of the 3' untranslated region JOURNAL Unpublished REFERENCE 3 (bases 1 to 383) AUTHORS Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M. TITLE Direct Submission JOURNAL Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint Denis, Ile de la Reunion 97715, France FEATURES Location/Qualifiers source 1..383 /db_xref="H-InvDB:HIT000081374" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="6" /map="6q21.3" /cell_type="B lymphoblastoid cell" gene <1..383 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" CDS <1..45 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" /note="DQ alpha; isoform spliced at acceptor 1 site and cleaved at CA dinucleotide downstream of poly(A1) sequence signal" /codon_start=1 /product="MHC class II antigen" /protein_id="AAM94827.1" /translation="GLRSVGASRHQGPL" 3'UTR 46..383 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" regulatory 355..360 /regulatory_class="polyA_signal_sequence" /gene="HLA-DQA1" /allele="HLA-DQA1*0102" polyA_site 383 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" BASE COUNT 91 a 112 c 64 g 116 t ORIGIN 1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag 61 ggaaggtgca tcgccatcta caggagcaga agaatggact tgctaaatga cctagcacta 121 ttctctggcc cgatttatca tatccctttt ctcctccaaa tattcctcct ctcacctttt 181 ctctgggact taagctgcta tatcccctca gagctcacaa atgcctttac attctttccc 241 tgacctcctg attttttttt ccttttctca atggtaccta cccagacatg cctggggtaa 301 gccacccggc tacctaattc ctcagtaacc tccatctaaa atctccaagg aagcaataaa 361 ttccttttat gagatctatg tca //