LOCUS AF533896 932 bp mRNA linear HUM 24-JUL-2016 DEFINITION Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0102 allele, partial cds. ACCESSION AF533896 VERSION AF533896.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 932) AUTHORS Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M. TITLE A new splicing acceptor site and poly(A)+ sequence signal within DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the extraordinary diversity of mRNA isoforms JOURNAL Immunogenetics 57 (3-4), 182-188 (2005) PUBMED 15900489 REFERENCE 2 (bases 1 to 932) AUTHORS Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M. TITLE HLA DQA1 gene generates multiple transcripts by alternative splicing and polyadenylation of the 3' untranslated region JOURNAL Unpublished REFERENCE 3 (bases 1 to 932) AUTHORS Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M. TITLE Direct Submission JOURNAL Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint Denis, Ile de la Reunion 97715, France FEATURES Location/Qualifiers source 1..932 /db_xref="H-InvDB:HIT000081357" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="6" /map="6q21.3" gene <1..932 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" CDS <1..45 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" /note="DQ alpha; full length isoform cleaved at poly(A3) sequence signal" /codon_start=1 /product="MHC class II antigen" /protein_id="AAM94810.1" /translation="GLRSVGASRHQGPL" 3'UTR 46..932 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" regulatory 901..906 /regulatory_class="polyA_signal_sequence" /gene="HLA-DQA1" /allele="HLA-DQA1*0102" polyA_site 932 /gene="HLA-DQA1" /allele="HLA-DQA1*0102" BASE COUNT 255 a 218 c 182 g 277 t ORIGIN 1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag 61 ggaaggtaag attgagactg gttacagttg aagcggcagt atgaaaggaa ggaaagtggg 121 agggcgttgt ggacatgaat gtggttgaaa gttgtagggg aattgggaag tggcatgatg 181 atgacacagg agccccctcg gacccattga tctcatgtct gccctgttgc aggtgcatcg 241 ccatctacag gagcagaaga atggacttgc taaatgacct agcactattc tctggcccga 301 tttatcatat cccttttctc ctccaaatat tcctcctctc accttttctc tgggacttaa 361 gctgctatat cccctcagag ctcacaaatg cctttacatt ctttccctga cctcctgatt 421 tttttttcct tttctcaatg gtacctaccc agacatgcct ggggtaagcc acccggctac 481 ctaattcctc agtaacctcc atctaaaatc tccaaggaag caataaattc cttttatgag 541 atctatgtca aatttttcca tctttcatcc agggctgact gaaactatgg ctaataattg 601 gggtactctt atgtttcaat ccaatttaac ctcatttccc agatcatttt tcatgtccag 661 taacacagaa gccaccaagt acagtatagc ctgataatat gttgatttct tagctgacat 721 taatatttct tgcttccttg tgttcccacc cttggcactg ccacccaccc ctcaattcag 781 gcaacaatga aattaatgga taccgtctgc ccttggccca gaattgttat agcaaaaatt 841 ttagaaccaa aaaataagtc tgtactaatt tcaatgtggc ttttaaaagt atgacagaga 901 aataagttag gataaaggaa atttgaatct ca //