LOCUS       AF533896                 932 bp    mRNA    linear   HUM 24-JUL-2016
DEFINITION  Homo sapiens MHC class II antigen (HLA-DQA1) mRNA, HLA-DQA1*0102
            allele, partial cds.
ACCESSION   AF533896
VERSION     AF533896.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 932)
  AUTHORS   Hoarau,J.J., Festy,F., Cesari,M. and Pabion,M.
  TITLE     A new splicing acceptor site and poly(A)+ sequence signal within
            DQA1*0401 and DQA1*0501 mRNA 3'UTR contribute to increase the
            extraordinary diversity of mRNA isoforms
  JOURNAL   Immunogenetics 57 (3-4), 182-188 (2005)
   PUBMED   15900489
REFERENCE   2  (bases 1 to 932)
  AUTHORS   Hoarau,J.-J., Cesari,M., Caillens,H., Cadet,F. and Pabion,M.
  TITLE     HLA DQA1 gene generates multiple transcripts by alternative
            splicing and polyadenylation of the 3' untranslated region
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 932)
  AUTHORS   Hoarau,J.-J., Cesari,M., Cadet,F., Marche,P. and Pabion,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2002) Laboratoire de Biochimie et Genetique
            Moleculaire, Universite de la Reunion, 15 avenue Rene Cassin, Saint
            Denis, Ile de la Reunion 97715, France
FEATURES             Location/Qualifiers
     source          1..932
                     /db_xref="H-InvDB:HIT000081357"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q21.3"
     gene            <1..932
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     CDS             <1..45
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
                     /note="DQ alpha; full length isoform cleaved at poly(A3)
                     sequence signal"
                     /codon_start=1
                     /product="MHC class II antigen"
                     /protein_id="AAM94810.1"
                     /translation="GLRSVGASRHQGPL"
     3'UTR           46..932
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     regulatory      901..906
                     /regulatory_class="polyA_signal_sequence"
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
     polyA_site      932
                     /gene="HLA-DQA1"
                     /allele="HLA-DQA1*0102"
BASE COUNT          255 a          218 c          182 g          277 t
ORIGIN      
        1 ggcctgcgtt cagttggtgc ttccagacac caagggccat tgtgaatccc atcctggaag
       61 ggaaggtaag attgagactg gttacagttg aagcggcagt atgaaaggaa ggaaagtggg
      121 agggcgttgt ggacatgaat gtggttgaaa gttgtagggg aattgggaag tggcatgatg
      181 atgacacagg agccccctcg gacccattga tctcatgtct gccctgttgc aggtgcatcg
      241 ccatctacag gagcagaaga atggacttgc taaatgacct agcactattc tctggcccga
      301 tttatcatat cccttttctc ctccaaatat tcctcctctc accttttctc tgggacttaa
      361 gctgctatat cccctcagag ctcacaaatg cctttacatt ctttccctga cctcctgatt
      421 tttttttcct tttctcaatg gtacctaccc agacatgcct ggggtaagcc acccggctac
      481 ctaattcctc agtaacctcc atctaaaatc tccaaggaag caataaattc cttttatgag
      541 atctatgtca aatttttcca tctttcatcc agggctgact gaaactatgg ctaataattg
      601 gggtactctt atgtttcaat ccaatttaac ctcatttccc agatcatttt tcatgtccag
      661 taacacagaa gccaccaagt acagtatagc ctgataatat gttgatttct tagctgacat
      721 taatatttct tgcttccttg tgttcccacc cttggcactg ccacccaccc ctcaattcag
      781 gcaacaatga aattaatgga taccgtctgc ccttggccca gaattgttat agcaaaaatt
      841 ttagaaccaa aaaataagtc tgtactaatt tcaatgtggc ttttaaaagt atgacagaga
      901 aataagttag gataaaggaa atttgaatct ca
//