LOCUS       AF533654                 308 bp    mRNA    linear   HUM 25-JUL-2016
DEFINITION  Homo sapiens clone B12 truncated DNA architectural factor HMGA2
            (HMGA2) mRNA, partial cds.
ACCESSION   AF533654
VERSION     AF533654.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   Quade,B.J., Weremowicz,S., Neskey,D.M., Vanni,R., Ladd,C., Dal
            Cin,P. and Morton,C.C.
  TITLE     Fusion transcripts involving HMGA2 are not a common molecular
            mechanism in uterine leiomyomata with rearrangements in 12q15
  JOURNAL   Cancer Res. 63 (6), 1351-1358 (2003)
   PUBMED   12649198
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Quade,B.J., Dal Cin,P. and Morton,C.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2002) Pathology, Brigham and Women's Hospital, 75
            Francis Street, Boston, MA 02115, USA
FEATURES             Location/Qualifiers
     source          1..308
                     /db_xref="H-InvDB:HIT000081353"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="t(12;14)(q15;q24)"
                     /clone="B12"
                     /cell_line="105274"
                     /cell_type="uterine leiomyoma"
     gene            <1..308
                     /gene="HMGA2"
                     /gene_synonym="HMGIC"
     CDS             <1..158
                     /gene="HMGA2"
                     /gene_synonym="HMGIC"
                     /note="aberrant HMGA2 transcript due to translocation and
                     chromosome rearrangement; corresponds to 3 DNA binding
                     domain fused to 1 ectopic amino acid encoded by cryptic
                     4th and last exon on chromosome 12"
                     /codon_start=3
                     /product="truncated DNA architectural factor HMGA2"
                     /protein_id="AAO48742.1"
                     /translation="KQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKKAEATGEKRPR
                     GRPRKWL"
BASE COUNT          110 a           65 c           73 g           60 t
ORIGIN      
        1 ggaagcagca gcaagaacca accggtgagc cctctcctaa gagacccagg ggaagaccca
       61 aaggcagcaa aaacaagagt ccctctaaag cagctcaaaa gaaagcagaa gccactggag
      121 aaaaacggcc aagaggcaga cctaggaaat ggttatgagt gtgacaaggc ggaacatcca
      181 agggatatgt tgcaggtgtc ttaagagtca ggtaaaaggc aagatgattc attatatctg
      241 ttcttttgtg atacccatgt aactacctat aagcttcaaa gtgaaataaa cattacctct
      301 tgtacctt
//