LOCUS AF530581 3068 bp mRNA linear HUM 03-SEP-2002 DEFINITION Homo sapiens non-neuronal splice variant nPTB4 (PTBP2) mRNA, complete cds; alternatively spliced. ACCESSION AF530581 VERSION AF530581.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3068) AUTHORS Rahman,L., Bliskovski,V., Reinhold,W. and Zajac-Kaye,M. TITLE Alternative splicing of brain-specific PTB defines a tissue-specific isoform pattern that predicts distinct functional roles JOURNAL Genomics 80 (3), 245-249 (2002) PUBMED 12213192 REFERENCE 2 (bases 1 to 3068) AUTHORS Zajac-Kaye,M. TITLE Direct Submission JOURNAL Submitted (18-JUL-2002) Basic Research Laboratory, NCI, NIH, 37 Convent Drive, Bldg. 37 R6050C, Bethesda, MD 20892, USA FEATURES Location/Qualifiers source 1..3068 /db_xref="H-InvDB:HIT000081300" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="1" /cell_type="HeLa" gene 1..3068 /gene="PTBP2" /note="nPTB4" CDS 56..1666 /gene="PTBP2" /note="splicing regulator; alternatively spliced" /codon_start=1 /product="non-neuronal splice variant nPTB4" /protein_id="AAM94625.1" /translation="MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDS KKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELA TEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTAN TPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQ FQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPD LPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGM PGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQ SQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSK NFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKMALLQMATVEE AIQALIDLHNYNLGENHHLRVSFSKSTI" BASE COUNT 918 a 524 c 610 g 1016 t ORIGIN 1 ggctcgctgg ctgcgtggct cggttcttgt gagcgaagct ttgtccggtt cggcaatgga 61 cggaatcgtc actgaggttg cagttggcgt gaagagagga tctgacgaac tactctcagg 121 cagtgttctc agtagtccga actctaatat gagcagcatg gtagttacag ccaatggtaa 181 tgatagtaaa aaatttaaag gagaagataa aatggatggt gctccttctc gtgtacttca 241 tattcgaaaa ttacctgggg aagtaacaga aactgaagtt attgctttag gcttaccttt 301 tggtaaggtg accaacatcc ttatgctgaa aggaaaaaat caggcatttt tggaactagc 361 aaccgaggaa gcagctatta ctatggttaa ttactattct gctgtgacac ctcatcttcg 421 taaccaacca atatatatcc agtactcgaa tcacaaagaa ctaaagacag ataatacatt 481 aaaccaacgt gctcaggcag ttcttcaagc tgtgacagct gtccagacag caaatactcc 541 tcttagtggc accacagtta gcgagagtgc agtgactcca gcccagagtc cagtacttag 601 aataattatt gacaacatgt actaccctgt aacacttgat gttcttcacc aaatattttc 661 taagtttggt gctgtattga agataatcac atttacaaaa aataaccagt ttcaagcttt 721 gctccagtat ggtgatccag taaatgctca acaagcaaaa ctagccctag atggtcagaa 781 tatttataat gcctgctgta ccctaaggat tgatttttcc aaacttgtga atttgaatgt 841 aaaatacaac aatgataaaa gtagggatta tactcgacct gatcttccat ctggggatgg 901 acaacctgca ttggacccag ctattgctgc agcatttgcc aaggagacat ccctcttagg 961 gcttcctgtt gcagctgttc caggagctct gagtcctttg gccattccaa atgctgctgc 1021 agcagctgct gcagctgctg ctggccgagt gggtatgcct ggagtctcag ctggtggcaa 1081 tacagtcctg ttggttagca atttaaatga agagatggtt acgccccaaa gtctgtttac 1141 cctcttcggt gtttatggag atgtgcagcg tgtgaagatt ttgtacaata agaaagacag 1201 cgctctaata cagatggctg atggaaacca atcacaactt gccatgaatc atcttaatgg 1261 acagaaaatg tatggaaaaa ttattcgtgt tactctgtct aaacatcaga ctgtacagct 1321 acctcgagag ggacttgatg atcaagggct aacaaaagat tttggtaatt ccccattgca 1381 tcgttttaag aaacctggat ccaaaaattt tcaaaacatt tttcctcctt ctgccaccct 1441 tcacctatct aatatccctc catcagtagc agaagaggat ctacgaacac tgttcgctaa 1501 cactgggggc actgtgaaag catttaagtt ttttcaagat cacaaaatgg ctcttcttca 1561 gatggcaaca gtggaagaag ctattcaggc cttgattgat cttcataatt ataaccttgg 1621 agaaaaccat catctgagag tgtctttctc caagtcaaca atttaaaaat gggaagatga 1681 agattggggg tgaatcacat tgttcaatgt catcacctat ttgactgttc agaaaagtgg 1741 ggaccagagt ttgatttttt ttgtttttgt ttttttgggg tttctttttt tttttccatg 1801 ctgttatcat tccttggtta taaaatgaaa tggcatatgt aaaggcagag ttgttaactg 1861 ctatatttca tctgttctat agggaagcca ttttgtctgt ttaaaatttc agtttaattt 1921 tgcttttttt tttttttttt tttcctttca acttagttga catacgtgcc ttaaaaagga 1981 aaactagtgt tgctattgtg catttactag aaaaaaggaa ttggttgttt agggcacact 2041 gttatatggg aattaaaata tgtttaggca ggggtgtgta aaaaggttaa gtttttgttt 2101 ctcctgcttg gaacttattt tgaattactg gcttgtcacc tttttttcta tttaatcaaa 2161 taagatacat gatattgaaa gaataaagca gcatttttag tttttactac cttaggcttt 2221 attgctttga aaacaacatt ggccttttgt atctcacaat tctggtctag attcagttat 2281 gaatgtaggc attagttaaa attaacaaga tgcagagtat taatttctta agacaacaaa 2341 gtgatttctg taagtttgag ccctatgtgg aaagcattgt ggaatcttaa cctttttgta 2401 cacactcttg tgggacgtat catataaatg tcagcactaa gtaatgtctt gtttgtggct 2461 gaatattttt cgtagatgtt tttgaagttg acatgactta cgtgcattta aatatatatt 2521 gccatcctta gtttgtaatt aagatttgga atatggttgt ggatttctga gcatgtgcag 2581 actggtctag ctagttcagg aactggtgca tgtatttttc aaagataaag aaagtgtact 2641 gcgaaaatat gcaggaagat taattttgtg gcagttttct aaaactgaca accaggtggg 2701 accaaagttt atgtgccttt agtcttaatt taccttgcat tgtaatattc agttttaata 2761 aatcttcaaa atattttgta tttaggaata gatctgactt taataaaaac atggctcaga 2821 atctacaggt caaattaatt tgaacagttc ttgtcaatcc gaattgttga ttctgtttaa 2881 atgaccaata ctttttgaaa ttgatgtact tagtttcaag attcatagat tctgttatct 2941 atgtagacag aatggtcatg tatattttct attagttgag tttttacatc tttagaaatg 3001 taaaattcag tatagtttga aagcggcaca attaaaaatt aattttctaa caaaaaaaaa 3061 aaaaaaaa //