LOCUS AF515448 4971 bp mRNA linear HUM 27-SEP-2011
DEFINITION Homo sapiens mesoderm induction early response 1 N1-beta mRNA,
complete cds, alternatively spliced.
ACCESSION AF515448
VERSION AF515448.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4971)
AUTHORS Paterno,G.D., Ding,Z., Lew,Y.Y., Nash,G.W., Mercer,F.C. and
Gillespie,L.L.
TITLE Genomic organization of the human mi-er1 gene and characterization
of alternatively spliced isoforms: regulated use of a facultative
intron determines subcellular localization
JOURNAL Gene 295 (1), 79-88 (2002)
PUBMED 12242014
REFERENCE 2 (bases 1 to 4971)
AUTHORS Paterno,G.D., Ding,Z., Lew,Y.Y., Nash,G.W., Mercer,F.C. and
Gillespie,L.L.
TITLE Direct Submission
JOURNAL Submitted (28-MAY-2002) Medicine, Memorial University, Health
Sciences Centre, St. John's, NF A1B 3V6, Canada
REFERENCE 3 (bases 1 to 4971)
AUTHORS Paterno,G.D., Ding,Z., Lew,Y.Y., Nash,G.W., Mercer,F.C. and
Gillespie,L.L.
TITLE Direct Submission
JOURNAL Submitted (27-SEP-2011) Medicine, Memorial University, Health
Sciences Centre, St. John's, NF A1B 3V6, Canada
REMARK Sequence update by submitter
COMMENT On Sep 27, 2011 this sequence version replaced AF515448.1.
FEATURES Location/Qualifiers
source 1..4971
/db_xref="H-InvDB:HIT000081102"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1p31.2"
CDS 254..1843
/note="transcription factor MI-ER1; alternatively spliced"
/codon_start=1
/product="mesoderm induction early response 1 N1-beta"
/protein_id="AAM76042.2"
/translation="MFMFNWFTDCLWTLFLSNYQPSVESSSPGGSATSDDHEFDPSAD
MLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEED
EEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQD
AQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKE
NEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYE
LVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRT
RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRA
PSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGEILNKEEVKVEGLHINGPTGGN
KKPLHADMDTNGYETDNLTTDPKLAHMTARNENDFDEKSERPAKRRRVNSNGKESPGS
SEFFQEAVSHGKFEELENTDD"
regulatory 4949..4954
/regulatory_class="polyA_signal_sequence"
BASE COUNT 1573 a 774 c 940 g 1684 t
ORIGIN
1 ctggaagaag gaggcgggcg gcccgggcct caggcccctc ccaggctctg agtctcccgg
61 ctgcaggcgg attggatggg gcttcttcag gcggtggcgg cagcagcgaa ggtggcggcg
121 gcagcagcgg cagcggctat ggtgtggtcg ctcgattctc ccagtgcctg gctgagtttc
181 ggacgtggtt aagaaccaac tggttgaggt tcaatgcaga caagacggat gtgatgctga
241 aaatgtgcat cagatgttta tgtttaattg gtttacagac tgtctgtgga ctcttttcct
301 gtcaaattac cagccatctg ttgaatcttc aagtccagga ggttcagcaa catcagatga
361 ccatgaattt gatccatcag ctgacatgct ggttcatgat tttgatgatg aacgaacatt
421 agaagaggaa gaaatgatgg aaggagaaac aaacttcagc tctgaaatag aagatcttgc
481 aagggaaggc gacatgccaa ttcatgaact tctcagcctt tatggttatg gtagtactgt
541 tcgactacct gaagaagatg aggaagagga agaagaggaa gaagaaggtg aagatgatga
601 agatgctgat aatgatgaca acagtggctg tagtggggaa aataaagagg agaatataaa
661 ggattcatca ggtcaggagg atgaaactca gtcttccaat gatgatccat cacaatctgt
721 tgcttctcaa gatgcccagg aaataatccg cccacgtcga tgtaaatatt ttgatacaaa
781 tagtgaagta gaagaagaat ctgaagaaga tgaagattat attccatcag aagactggaa
841 aaaggagatt atggtgggct ccatgtttca agcagaaatt ccagttggca tttgtagata
901 caaagaaaat gaaaaagtat atgaaaatga tgatcagctc ctgtgggacc ctgagtactt
961 accagaagat aaagtgatta tatttcttaa agatgcatct agaagaacag gtgatgagaa
1021 gggtgtagaa gcaattcctg aaggatctca cataaaagac aatgaacagg ctttatatga
1081 attggttaaa tgcaattttg atacagaaga agcattgaga agattaagat ttaatgtaaa
1141 agcagctaga gaggaattat ctgtttggac agaggaagag tgtagaaatt ttgaacaagg
1201 gctgaaggcc tatggaaagg attttcattt gattcaggct aataaagtcc gaacaaggtc
1261 agttggtgaa tgtgtagcat tctattacat gtggaaaaaa tctgaacgtt atgatttctt
1321 tgctcagcaa acacgatttg gaaagaagaa atataatctt catcctggtg taacggatta
1381 catggatcgt cttctagacg aaagtgaaag tgctgcatct agtcgagcac catcccctcc
1441 cccaactgca tcaaacagta gtaacagcca gtctgagaaa gaagatggca ctgtaagcac
1501 tgctaatcaa aatggagtgt catctaatgg accaggtgaa atattaaaca aagaggaagt
1561 aaaagttgaa gggttacaca ttaatggacc aacaggtgga aataagaaac cacttcatgc
1621 agatatggat actaatggtt atgaaacaga taaccttacc actgacccaa aacttgccca
1681 tatgactgca agaaatgaaa atgattttga tgaaaaaagt gagagacctg ccaaaaggcg
1741 aagggtaaac agcaatggaa aagaaagtcc aggttcttct gaatttttcc aagaagcagt
1801 ctcacatggg aaatttgaag aacttgaaaa cacagatgac taaattttag acctatttta
1861 ctttctttgg agtaaattct ggtgtgacta aaattttcag ggttgatggg ttaccttaaa
1921 aagttgattt ccttgaagca gtttgaaaat ttgaattgag tcttaacttt aggaaatgag
1981 gtttcataat tctgcctttt gcagattttt tttactttaa agctgtcaga ctcttttaag
2041 ggtattttaa aaattagtaa atttgaatga actaaagata tatctctacc ttctcatttg
2101 aatatcttta gttcattcag atttactaat tttggtaaat ctgaatgaac taaagatgta
2161 tctgtacctt ctcatttgat gtattaatca taaaatttca ctacaaggta atttttgctt
2221 agtttgatgg atgaatggga aactcaagtc caaatttctg cttaatacca atttctctga
2281 gtttcttgaa atgtctttaa aacagacatt tttctcacca aacagtttga gtatctttat
2341 taaggaaacc cttacgaatc ctgaaaatta tgctagcatg atttttttat atatagaagt
2401 ttaaaaataa accaggtcag gtttgtatat gtaaaattgt tgacatcaat gatgtctttc
2461 catattctta tctgggctta agaaatacat tctgtatttt tccagattct ttgtagcctt
2521 tgaaagattt ttacagtaca tatgtcttga ctgagctgtc ctttcttaat acaaaagcgt
2581 gtataatttt cttaacttgt acagttggta aacttttatg agaggaattg ttattctgag
2641 tctgtcagct ttcattttat tttgctaagg tttttctaat gaatttttaa gtgtttgtgt
2701 agtaattaag tcatatttct tatccaggtg gttaaagcat tcataaagga ttataaaatt
2761 tttttttttt tttttttaaa tttctactta agggcaagta atttgagaat tctgaaatta
2821 agcatgatgc ttagattgca gtttgttttg catttgctct aattttcaaa attatttttg
2881 aagcaagaca aaagtttaat gtcagcttaa gtgcttaaat atatcatgct gaccagaatc
2941 ctgttatttt tatatgcatc ataaaatttc ccatttctgc attaaataaa cagaggaggg
3001 gggtcaagtg atacttagat attggcacac acaaggaaca actgttggca ggcagtatcg
3061 attttatgaa gagaaagtga agtttgaaaa cttttcaaac ttttctagtt acaatccaat
3121 ttttcagatt tgataatgct tttccaaagt gaaaataaga tacacaataa tcattgcttt
3181 ttgtgattac agataggatt atccatctgc atagccttgt aaaagtgcca ttttattttt
3241 agtgctaaat tcttgttaaa taatgtagtt ttatatagct gatagaccaa cctatatcca
3301 aacttttata aaatattaat tattcttgtt tttctcacac aggcatactc caaatgcttc
3361 ttccagttca tttttcagcc atcagttcaa gagccaatgc ctttttaaaa taaagcttct
3421 gtggtcttgt ttttaatggc tcaactgtct gatgtaattg agtgaaggtt tgcactgaga
3481 aattagcatt caggccttac ccccatgaag tattactgtt aacatatgtt cggactgctt
3541 cccttcacca atgtgaacaa ctttttttcc caaacagtat taaaagccac tttgcaacac
3601 ttgacttcat cttaatgtac attcactgtt gttacataca tatctaagta aatcaaagtt
3661 ttgggtggaa gtgttgagaa gtatgagttt tttgttgttt ttgttttact taaaactttt
3721 aatttatcca gaatggcagt agctttagca agcagatggt cacaatctgt tttctaaatc
3781 attttttatt aaatgaatcc aaagtatcct agctctttgt caaagatggt ctgtagaaat
3841 gtttttaaag attagggatg ctgtactttt tgaattgttg cagtgttgga gatgccattt
3901 tcaccttttt aaaaagatgc attttatttg caggtttgtg aagttcttgc aaactcttac
3961 tacagaaatg ttttaaatac attctcaggc atgtttgcaa aaatatggca catgtataca
4021 ttttaggaaa tgttactttt gttaatcttt aaaaaataca cctaatgaaa gacattccac
4081 tattatgcgt aatgctcagc tttttgtaaa gaaatattta attgtatttt gtgtttatac
4141 aggtatttca cacaataatt tgttcttaat gcagccacta taacttgata agtcattgca
4201 ctatttaaaa agttttagta atatcatgaa tttaatttgc ttaagattta gtacatttca
4261 gaacttttga acttttgaca aattgcattg ggaaaagaag tctgttaata gtgatttagt
4321 ctccccgcct cattcccacc cccaacaaag cactatcatt ttcatttgga atgggtattt
4381 ttctgtttca tgatgtattt tcaaatagag ttcaggatct gcaattcagt tcaacacaag
4441 tttgttgagc tttaaaatgt atttgaagta atatttaaat aggcatttaa aatttcaaat
4501 tagatgttaa atttatgcat agtaattttg cactgtaaaa taattccctt ctcccattcc
4561 ttgtctgcca ttctgaatat gcttattaaa atattttttt aaacatattt gcctacataa
4621 tactgtgtga atattttcat tagattaatt cactaagatt ttattagaga ttgtttgaat
4681 gatgcatgtt attgacaagg caaatatata tatatacaca gtctgtttct tctattccta
4741 gacatattgc actacttttt cagtggttct tggtcccctt taccacatct tgggtgatgt
4801 atttttgtct tcttcccctt tgccacaaga gatcctttca gtccctagac ctccattcac
4861 tctgtttctc ttctgctgga ttatataatt taaaaataat gtgttcccgt attttgtagt
4921 ggagttcata tcacattatg ttttgcaaaa taaaacttgt tttgtcacaa t
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