LOCUS AF499137 3169 bp mRNA linear HUM 29-SEP-2003
DEFINITION Homo sapiens brain synaptopodin mRNA, complete cds.
ACCESSION AF499137
VERSION AF499137.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3169)
AUTHORS Reddy,P.H. and Gutala,R.
TITLE Loss of Spine Apparatus Associated Protein Synaptopodin in
Alzheimer's Disease
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3169)
AUTHORS Reddy,P.H. and Gutala,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) Neurogenetics, Neurological Sciences
Institute, OHSU, 505 NW, 185th Avenue, Beaverton, OR 97006, USA
FEATURES Location/Qualifiers
source 1..3169
/db_xref="H-InvDB:HIT000243611"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q33.2"
/tissue_type="brain"
CDS 457..3168
/note="actin associated protein"
/codon_start=1
/product="synaptopodin"
/protein_id="AAQ07403.1"
/translation="MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHL
SQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPA
TVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKV
STPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTP
TKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPS
LPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPLASWV
RSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVTPN
PDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARC
PSPTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQ
LRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLY
TSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESL
PTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPL
RPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPP
PPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPT
DSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLPAEASCTT"
BASE COUNT 604 a 1207 c 883 g 475 t
ORIGIN
1 tgggattttc ctggcttcgt cagccaagca attggctgcc tttgccggag gctttgagaa
61 ccaaggcttg aaggccggca ggagcatcca gggggaagct tggcttcagg gaggacctag
121 cagacgttgg gccggagcac tagcctcacg gagaaggatc tgaaagaagc caaggcgcgg
181 agccagcaga ttgcagccca gctgaccacc cctcccagct ccaattcccg tggcgtccag
241 ctcttcaaca ggcgccggca gagggtgaac gagttcacct tggagagcca cggccagagg
301 ggacagaagc ccagccagga gtccctcaga gtgctccctt caagcctccc aggccatgca
361 ccggggctca gcctgagttc cacctcgctg ccggagccag gccctccacg gcaccccagt
421 ccccagagcc ccgacagagg ggtccctggc cacagcatgg aggggtactc agaggaggct
481 agcttgctgc ggcacctgga gaaggtggcc agtgaggagg aagaggtacc actggtggtt
541 tatctaaagg agaatgcagc actgctgaca gccaatgggc tgcacctgtc ccaaaaccga
601 gaggcccagc agtcctcacc ggccccacct ccagctgagg tccacagccc agctgcagat
661 gtcaaccaaa accttgcctc gcccagtgcc acgctcacca caccaacttc taacagcagc
721 cacaatccgc cagccaccga tgtcaatcag aacccaccgg caactgttgt cccacagagc
781 ctgccacttt ctagcatcca acagaattcc tcagaggccc aactcccatc taatggcaca
841 gggcctgctt ccaaacccag caccctgtgt gctgatgggc aaccccaggc accggctgag
901 gaggtgagat gcagcacact cctaattgac aaggtatcaa ctccagctac caccaccagc
961 accttctcca gagaagctac gctcatcccc agctccaggc ccccagcctc agatttcatg
1021 tccagctccc tgctcattga catccagccc aacaccctag tggtgtcagc agatcaagag
1081 atgtctgggc gagcagctgc caccacgccc accaaggtct acagtgaggt ccacttcaca
1141 ctggccaagc ccccatcagt ggtcaacagg acggccaggc cttttgggat ccaggcgcca
1201 gggggcacca gccagatgga gaggagcccc atgctagaga gacgacattt tggggagaag
1261 gccccggctc cccagccccc cagtttgcca gacaggagcc cccggccaca gagacacata
1321 atgtcccgca gccccatggt ggaaaggagg atgatggggc agcgaagccc ggcctcagag
1381 agacgcccct tggggaactt cactgcaccc cccacctaca ctgagacctt gtccacagcc
1441 cctctggctt cctgggtgag gtctcctccc tcatattctg tcctgtatcc cagctccgac
1501 cccaagtctt ctcatctgaa gggccaggcg gttcctgcca gcaagacggg cattctggag
1561 gagtcgatgg cccgccgggg cagccgcaaa tccatgttta ctttcgtgga gaagcccaag
1621 gtgaccccga atccagactt gctggatctg gtacagacag cggatgagaa gcggcggcag
1681 agggaccagg gggaggtagg cgtggaggag gagcccttcg cactgggggc cgaggcctcc
1741 aacttccagc aggagccagc acctcgtgac agggccagcc ccgcggcggc ggaggaggtg
1801 gtaccagagt gggcctcctg cctcaagtca ccccgcatcc aggccaagcc gaagcccaaa
1861 cccaaccaga acctctccga ggcctctggg aagggagctg agctctacgc ccgccgccag
1921 tcacggatgg agaaatatgt catcgagtct tcaagccaca cgccagagct ggcccgctgc
1981 ccatcaccta ccatgtccct gccttcctcc tggaaatacc ccactaacgc ccccggggcc
2041 ttccgagtgg catcccgaag cccagcccgg accccgcctg cctccctcta ccatggctac
2101 ctgcctgaga acggggtcct gcgcccagag cccaccaagc agccgccata ccagctgcgc
2161 ccctcgctct ttgtcctctc acctatcaag gagcctgcca aggtctcacc aagagctgcc
2221 tcgcccgcca agcccagctc cttggacctg gtgcccaacc tgcccaaggg ggctctccct
2281 ccatctcctg ccctgcctcg gccctcgcgc tcctcaccgg gcctctacac ctcccccggc
2341 caggacagcc tgcagcccac tgccgtgagc cctccttacg gcggtgacat ctcccccgtg
2401 tctccctcca gggcgtggtc tccccgagcc aagcaggccc ccaggccctc cttctctacc
2461 cggaacgccg ggatcgaggc tcaggaccgc cgggagagcc tgcccacctc cccaccctgg
2521 acgccgggcg cgtcccggcc ccccagcagc ctagacggct gggtgagccc gggcccgtgg
2581 gagccaggtc gcgggagcag catgagcagc cccccgccgc tgccgccgcc accgcccatg
2641 tctccctcgt ggagcgagcg ctcggtgtcc ccgctgcgac ctgagaccga ggcgcggccc
2701 cccagccgcc agctgcaggc gcttctggcg cgaaacatca tcaatgcggc ccggcgcaag
2761 agcgcctccc cgcggtcggc gggcgccgag aacccgcggc ccttctcccc gccgagggcg
2821 ccaccgcccc cgcccccgcc cccgcccccg cccccgcgca tgcgctcgcc acagcccgcc
2881 cgccccggct cggctgctgt gccgggggca gccttcgcgc ccatcccgcg gagcccgttg
2941 cccgccggtc cttcgtcctg caccagtccc cggagcccgc tgcccgcgcc tcccaggccc
3001 ttcctctacc gccgctcgcc cacggactcc gacgtgtccc tcgactccga ggactccggg
3061 gctaagtctc caggcatcct gggctacaat atctgtcccc gcgggtggaa tggcagcctt
3121 cggctcaagc gtggcagcct ccccgccgag gcctcctgca ccacctaga
//