LOCUS AF468010 5978 bp mRNA linear HUM 27-AUG-2003
DEFINITION Homo sapiens NCSG135 mRNA, complete cds.
ACCESSION AF468010
VERSION AF468010.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5978)
AUTHORS Hooper,J.D., Zijlstra,A., Aimes,R.T., Liang,H., Claassen,G.F.,
Tarin,D., Testa,J.E. and Quigley,J.P.
TITLE Subtractive immunization using highly metastatic human tumor cells
identifies SIMA135/CDCP1, a 135 kDa cell surface phosphorylated
glycoprotein antigen
JOURNAL Oncogene 22 (12), 1783-1794 (2003)
PUBMED 12660814
REFERENCE 2 (bases 1 to 5978)
AUTHORS Hooper,J.D., Zijlstra,A., Aimes,R.T., Claassen,G.F. and
Quigley,J.P.
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) Cell Biology, Scripps Research Institute,
10550 North Torrey Pines Road, La Jolla, CA 92037, USA
FEATURES Location/Qualifiers
source 1..5978
/db_xref="H-InvDB:HIT000080366"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="3"
/map="3p21.32"
CDS 111..2621
/note="novel cell surface glycoprotein 135 kDa"
/codon_start=1
/product="NCSG135"
/protein_id="AAO33397.1"
/translation="MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLI
KLGTPTLLAKPCYIVISKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSG
PCPFGEVQLQPSTSLLPTLNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVT
HSISGRIDATVVRIGTFCSNGTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIK
RLCIIESVFEGEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCER
KEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLV
QHPQNESNKIYVVDLSNERAMSLTIEPRPVKQSRKFVPGCFVCLESRTCSSNLTLTSG
SKHKISFLCDDLTRLWMNVEKTISCTDHRYCQRKSYSLQVPSDILHLPVELHDFSWKL
LVPKDRLSLVLVPAQKLQQHTHEKPCNTSFSYLVASAIPSQDLYFGSFCPGGSIKQIQ
VKQNISVTLRTFAPSFRQEASRQGLTVSFIPYFKEEGVFTVTPDTKSKVYLRTPNWDR
GLPSLTSVSWNISVPRDQVACLTFFKERSGVVCQTGRAFMIIQEQRTRAEEIFSLDED
VLPKPSFHHHSFWVNISNCSPTSGKQLDLLFSVTLTPRTVDLTVILIAAVGGGVLLLS
ALGLIICCVKKKKKKTNKGPAVGIYNGNINTEMPRQPKKFQKGRKDNDSHVYAVIEDT
MVYGHLLQDSSGSFLQPEVDTYRPFQGTMGVCPPSPPTICSRAPTAKLATEEPPPRSP
PESESEPYTFSHPNNGDVSSKDTDIPLLSTQEPMEPAE"
BASE COUNT 1457 a 1637 c 1407 g 1477 t
ORIGIN
1 gcgcgcaggt gagtgagcca gggcggagcg cagctgcgcc gggcttgggc gcctggggcc
61 gccgctcccc accgtcgttt tccccaccga ggccgaggcg tcccggagtc atggccggcc
121 tgaactgcgg ggtctctatc gcactgctag gggttctgct gctgggtgcg gcgcgcctgc
181 cgcgcggggc agaagctttt gagattgctc tgccacgaga aagcaacatt acagttctca
241 taaagctggg gaccccgact ctgctggcaa aaccctgtta catcgtcatt tctaaaagac
301 atataaccat gttgtccatc aagtctggag aaagaatagt ctttaccttt agctgccaga
361 gtcctgagaa tcactttgtc atagagatcc agaaaaatat tgactgtatg tcaggcccat
421 gtccttttgg ggaggttcag cttcagccct cgacatcgtt gttgcctacc ctcaacagaa
481 ctttcatctg ggatgtcaaa gctcataaga gcatcggttt agagctgcag ttttccatcc
541 ctcgcctgag gcagatcggt ccgggtgaga gctgcccaga cggagtcact cactccatca
601 gcggccgaat cgatgccacc gtggtcagga tcggaacctt ctgcagcaat ggcactgtgt
661 cccggatcaa gatgcaagaa ggagtgaaaa tggccttaca cctcccatgg ttccacccca
721 gaaatgtctc cggcttcagc attgcaaacc gctcatctat aaaacgtctg tgcatcatcg
781 agtctgtgtt tgagggtgaa ggctcagcaa ccctgatgtc tgccaactac ccagaaggct
841 tccctgagga tgagctcatg acgtggcagt ttgtcgttcc tgcacacctg cgggccagcg
901 tctccttcct caacttcaac ctctccaact gtgagaggaa ggaggagcgg gttgaatact
961 acatcccggg ctccaccacc aaccccgagg tgttcaagct ggaggacaag cagcctggga
1021 acatggcggg gaacttcaac ctctctctgc aaggctgtga ccaagatgcc caaagtccag
1081 ggatcctccg gctgcagttc caagttttgg tccaacatcc acaaaatgaa agcaataaaa
1141 tctacgtggt tgacttgagt aatgagcgag ccatgtcact caccatcgag ccacggcccg
1201 tcaaacagag ccgcaagttt gtccctggct gtttcgtgtg tctagaatct cggacctgca
1261 gtagcaacct caccctgaca tctggctcca aacacaaaat ctccttcctt tgtgatgatc
1321 tgacacgtct gtggatgaat gtggaaaaaa ccataagctg cacagaccac cggtactgcc
1381 aaaggaaatc ctactcactc caggtgccca gtgacatcct ccacctgcct gtggagctgc
1441 atgacttctc ctggaagctg ctggtgccca aggacaggct cagcctggtg ctggtgccag
1501 cccagaagct gcagcagcat acacacgaga agccctgcaa caccagcttc agctacctcg
1561 tggccagtgc catacccagc caggacctgt acttcggctc cttctgcccg ggaggctcta
1621 tcaagcagat ccaggtgaag cagaacatct cggtgaccct tcgcaccttt gcccccagct
1681 tccgacaaga ggcctccagg cagggtctga cggtgtcctt tataccttat ttcaaagagg
1741 aaggcgtttt cacggtgacc cctgacacaa aaagcaaggt ctacctgagg acccccaact
1801 gggaccgggg cctgccatcc ctcacctctg tgtcctggaa catcagtgtg cccagagacc
1861 aggtggcctg cctgactttc tttaaggagc ggagcggcgt ggtctgccag acagggcgcg
1921 cattcatgat catccaggag cagcggaccc gggctgagga gatcttcagc ctggacgagg
1981 atgtgctccc caagccaagc ttccaccatc acagcttctg ggtcaacatc tctaactgca
2041 gccccacgag cggcaagcag ctagacctgc tcttctcggt gacacttacc ccaaggactg
2101 tggacttgac tgtcatcctc atcgcagcgg tgggaggtgg agtcttactg ctgtctgccc
2161 tcgggctcat catttgctgt gtgaaaaaga agaaaaagaa gacaaacaag ggccccgctg
2221 tgggtatcta caatggcaac atcaatactg agatgccgag gcagccaaaa aagtttcaga
2281 aagggcgaaa ggacaatgac tcccatgtgt atgcagtcat cgaggacacc atggtatatg
2341 ggcatctgct acaggattcc agcggctcct tcctgcagcc agaggtggac acctaccggc
2401 cgttccaggg caccatgggg gtctgtcctc cctccccacc caccatatgc tccagggccc
2461 caactgcaaa gttggccact gaggagccac ctcctcgctc ccctcctgag tctgagagtg
2521 aaccgtacac cttctcccat cccaacaatg gggatgtaag cagcaaggac acagacattc
2581 ccttactgag cactcaggag cccatggagc cagcagaata acttgatcca ttccagacgc
2641 tttgctgagt ttcataaagc agggcactga gacacccgtc cgtgttccta accagaaatc
2701 ctaaagaaga ggaattatac agaaggaaca gcaggaggtt ttcctggaca ccgccaactt
2761 cacattgctc agtggactca ttctaagggc aagacattga aaatgatgaa ttccaatctg
2821 gatacagtca tgacagctca tgtgctcctc aacttaggct gtgcggttag ccagcctgta
2881 atgagaggag agaggcctga gtcacctagc atagggttgc agcaagccct ggattcagag
2941 tgttaaacag aggcttgccc tcttcaggac aacagttcca attccaagga gcctacctga
3001 ggtccctact ctcactgggg tccccaggat gaaaacgaca atgtgccttt ttattattat
3061 ttatttggtg gtcctgtgtt atttaagaga tcaaatgtat aaccacctag cacttttcac
3121 ctgacttagt aataactcat actaactggt ttggatgcct gggttgtgac ttctactgac
3181 cgctagataa acgtgtgcct gtcccccagg tggtgggaat aatttacaat ctgtccaacc
3241 agaaaagaat gtgtgtgttt gagcagcatt gacacatatc tgctttgata agagacttcc
3301 tgattctcta ggtcggttcg tggttatccc attgtggaaa ttcatcttga atcccattgt
3361 cctatagtcc tagcaataag agaaatttcc tcaagtttcc atgtgcggtt ctcctagctg
3421 cagcaatact ttgacattta aagagaaatt tagagaatat tctcatcctc taaaaatgtt
3481 taaatatata ccaaacagtg gccccctgca ttagttttct gttgccactg caacctatta
3541 cttggtagct taaaaacaac acattagctt atagtcctgg ggatcagaat tccaaaatgg
3601 atgtccctga atgaaaatca aggtgtcagc agagctgtgc tccttctgaa ggctctaggg
3661 agaagccggt tccttgccat ttcaagcttc tagaggctgg ctgcattccc aggctccagt
3721 ggctggtcaa gcttttctca catggcatca ctgtgacact ggccctccca cttccctctt
3781 tgacttacaa agcccaccag gaagatccag gataatctct ccatctaaag ttccttcatc
3841 atcctggaag agccttttgc catgcaagac aacatagcca caggtgggga ttaggaccag
3901 aacatctttg gggtgctgtt attctgccta ccacaccttc ctgccactga ctcccacagg
3961 agaggctaca aaatgatctg gcgcacaggg atgttttgtt tagcttgcgg actctaacac
4021 ttaaaaaaaa acccagatca gaagatctgg ccatgctggg gctcacattc tcacctagca
4081 acaactggct ggagctgggc accagctctg cctttagaag gggtgtccac ttcaccaggt
4141 caccacagcc cacactacgc cctatcactt cccacaatga ggctgagtgt ttgtttctac
4201 tgatcaatgc ccctgcaggt tgcatttatt gtaatgaaaa agaaagactg ggattaatct
4261 ctaatcaggt gagtagacca tgagaccaat gtgtgctcac attacccttt ttcttttttt
4321 tctttttctt tttctttttt tttttaatgt gagacaggat ctcattctgt tgcctaggct
4381 ggagtgcagt ggcgcaatct cggctcactg caacctctgc ctcctgggct caagcaattc
4441 tcccacctca gcctcccaaa tagctgggat cactggcaca aaccaccatg cccagctaat
4501 tttgtatttt ttgtagagac agggtttcac catgttgccc aggctggtct caacctcctg
4561 ggctcaagca atcctcctgc ctcggcctcc caaagtgctg ggattacaga tgtgagccac
4621 cgcatccagc cccacaccct catttatacc aattacctgc ccagtaactg tggacttttg
4681 cttcctcacc cctgctctga tctggaagga gagggattat gttatagctt gtcagcacag
4741 tcccaagttc aatatttctg cggcaaaaac ttccttcaaa aaataaatgt acttcattgt
4801 attcaatgaa ttcaccttgg aaatgcaccg cctcaacttg ttcacatggc ataaatgaaa
4861 ggaattttat agtctcctaa atggcgtgta ctgcaagacc tcttgaacac tttccagagg
4921 ataggatatt taagtcatgc ccttgcgtcc tatggcacct ttcccttctg aaagtctggt
4981 tcctgcccag tgacccttgg ccttgtgagc cgagatgctg accctgcata aagggccaaa
5041 ggagggctgc ggcttccttc cctcactgaa gagcccttat ttgaattcac tgtgtggagc
5101 cctagccctc cattctcgac attccccaac ctcccagccc cttccaagca ggactaggtg
5161 ccctgcattc cacccaaggt gggattggcc ttccttaggc tggctacttg tcaccatcac
5221 cgacatcact gttgcctgca aggacaccac gtggccattt tccttcaact gagggctcaa
5281 aactcctgga caagttgctg gctcctgaga ccagtatttc ctggagctgt gcctcagtga
5341 aggggcccag cctgaggaac cctggctctt ttctttaaag cccaggcccc acttacgtaa
5401 aacatttcag ggtcactgga aacagtgaag tgccatttgt tgaagcctac tgcatgccag
5461 cccactgctc atccacgtgg tctgccatgc ctacgaggaa ggccagcgca tgcaggactg
5521 gtctctaatg ctgtggtcat tgcacagaag ggaaaggtct caaggaagag tcaactggaa
5581 caagcacaag cccaccggac atggccttgg taaaggttag cagactggtg tgtgtggatc
5641 tgcagtgctt cactggaaat aatttattca ttgcagatac tttttaggtg gcattttatt
5701 catttcctgt gctttaaata aacaaatgta ccaaaaaaca agtatcaagc tgtttaagtg
5761 cttcggctac ttgtcccctg gttcagtaga ggccccggtt tcccagttgt tgactgtgac
5821 aggctcagca tgggctcagc agatgctgtc ttaatttgtg gatgatacag aaagccaggc
5881 tttgggatac aagttctttc ctcttcattt gatgccgtgc actgtgtgaa gcagatgttt
5941 ttgtccggaa ataaaaataa tagtcttgga gtctcgcc
//