LOCUS AF466144 7634 bp mRNA linear HUM 27-MAR-2002
DEFINITION Homo sapiens retinoic acid inducible in neuroblastoma cells RAINB1d
mRNA, complete cds.
ACCESSION AF466144
VERSION AF466144.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7634)
AUTHORS Merrill,R.A., Plum,L.A., Kaiser,M.E. and Clagett-Dame,M.
TITLE A mammalian homolog of unc-53 is regulated by all-trans retinoic
acid in neuroblastoma cells and embryos
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (6), 3422-3427 (2002)
PUBMED 11904404
REFERENCE 2 (bases 1 to 7634)
AUTHORS Merrill,R.A., Plum,L.A., Kaiser,M.E. and Clagett-Dame,M.
TITLE Direct Submission
JOURNAL Submitted (08-JAN-2002) Biochemistry, University of Wisconsin -
Madison, 433 Babcock Dr., Madison, WI 53706, USA
FEATURES Location/Qualifiers
source 1..7634
/db_xref="H-InvDB:HIT000080325"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="11"
/cell_line="SH-SY5Y"
/cell_type="neuroblastoma"
CDS 77..7375
/note="similar to unc-53"
/codon_start=1
/product="retinoic acid inducible in neuroblastoma cells
RAINB1d"
/protein_id="AAL96480.1"
/translation="MPAILVASKMKSGLPKPVHSAAPILHVPPARAGPQPCYLKLGSK
VEVSKTTYPSQIPLKSQVLQGLQEPAGEGLPLRKSGSVENGFDTQIYTDWANHYLAKS
GHKRLIRDLQQDVTDGVLLAQIIQVVANEKIEDINGCPKNRSQMIENIDACLNFLAAK
GINIQGLSAEEIRNGNLKAILGLFFSLSRYKQQQQQPQKQHLSSPLPPAVSQVAGAPS
QCQAGTPQQQVPVTPQAPCQPHQPAPHQQSKAQAEMQSRLPGPTARVSAAGSEAKTRG
GSTTANNRRSQSFNNYDKSKPVTSPPPPPSSHEKEPLASSASSHPGMSDNAPASLESG
SSSTPTNCSTSSAIPQPGAATKPWRSKSLSVKHSATVSMLSVKPPGPEAPRPTPEAMK
PAPNNQKSMLEKLKLFNSKGGSKAGEGPGSRDTSCERLETLPSFEESEELEAASRMLT
TVGPASSSPKIALKGIAQRTFSRALTNKKSSLKGNEKEKEKQQREKDKEKSKDLAKRA
SVTERLDLKEEPKEDPSGAAVPEMPKKSSKIASFIPKGGKLNSAKKEPMAPSHSGIPK
PGMKSMPGKSPSAPAPSKEGERSRSGKLSSGLPQQKPQLDGRHSSSSSSLASSEGKGP
GGTTLNHSISSQTVSGSVGTTQTTGSNTVSVQLPQPQQQYNHPNTATVAPFLYRSQTD
TEGNVTAESSSTGVSVEPSHFTKTGQPALEELTGEDPEARRLRTVKNIADLRQNLEET
MSSLRGTQVTHSTLETTFDTNVTTEMSGRSILSLTGRPTPLSWRLGQSSPRLQAGDAP
SMGNGYPPRANASRFINTESGRYVYSAPLRRQLASRGSSVCHVDVSDKAGDEMDLEGI
SMDAPGYMSDGDVLSKNIRTDDITSGYMTDGGLGLYTRRLNRLPDGMAVVRETLQRNT
SLGLGDADSWDDSSSVSSGISDTIDNLSTDDINTSSSISSYANTPASSRKNLDVQTDA
EKHSQVERNSLWSGDDVKKSDGGSDSGIKMEPGSKWRRNPSDVSDESDKSTSGKKNPV
ISQTGSWRRGMTAQVGITMPRTKASAPAGALKTPGTGKTDDAKVSEKGRLSPKASQVK
RSPSDAGRSSGDESKKPLPSSSRTPTANANSFGFKKQSGSAAGLAMITASGVTVTSRS
ATLGKIPKSSALVSRSAGRKSSMDGAQNQDDGYLALSSRTNLQYRSLPRPSKSNSRNG
AGNRSSTSSIDSNISSKSAGLPVPKLREPSKTALGSSLPGLVNQTDKEKGISSDNESV
ASCNSVKVNPAAQPVSSPAQTSLQPGAKYPDVASPTLRRLFGGKPTKQVPIATAENMK
NSVVISNPHATMTQQGNLDSPSGSGVLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAP
SNSLTWGTNASSSSAVSKDGLGFQSVSSLHTSCESIDISLSSGGVPSHNSSTGLIASS
KDDSLTPFVRTNSVKTTLSESPLSSPAASPKFCRSTLPRKQDSDPHLDRNTLPKKGLR
YTPTSQLRTQEDAKEWLRSHSAGGLQDTAANSPFSSGSSVTSPSGTRFNFSQLASPTT
VTQMSLSNPTMLRTHSLSNADGQYDPYTDSRFRNSSMSLDEKSRTMSRSGSFRDGFEE
VHGSSLSLVSSTSSVYSTPEEKCQSEIRKLRRELDASQEKVSALTTQLTANAHLVAAF
EQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQNAAAQAAINGVINTPELNCK
GNGTAQSADLRIRRQHSSDSVSSINSATSHSSVGSNIESDSKKKKRKNWVNELRSSFK
QAFGKKKSPKSASSHSDIEEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMD
SEAETVMQLRNELRDKEMKLTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRL
KSESQGSGCSRAPSQVSISASPRQSMGLSQHSLNLTESTSLDMLLDDTGECSARKEGG
RHVKIVVSFQEEMKWKEDSRPHLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPV
SQLGLNSDSVLGYSIGEIKRSNTSETPELLPCGYLVGENTTISVTVKGLAENSLDSLV
FESLIPKPILQRYVSLLIEHRRIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIA
TFNVDHKSSKELRQYLSNLADQCNSENNAVDMPLVIILDNLHHVSSLGEIFNGLLNCK
YHKCPYIIGTMNQATSSTPNLQLHHNFRWVLCANHTEPVKGFLGRFLRRKLMETEISG
RVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDVTIGPRLFLSCPIDVDGSRVWFTDLW
NYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDTYPWAASPQQHEWPPLLQLRPEDV
GFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQEAANYSSPQSYDSDSNSNSHHDD
ILDSSLESTL"
BASE COUNT 1928 a 2319 c 1997 g 1390 t
ORIGIN
1 acccgcgctg cctttagcgg tcgcccccgc cgccgctgcc agggacgtgc tgggaaagcc
61 caagccccgg gagaagatgc cggccatcct ggtcgcctcc aaaatgaagt cgggactgcc
121 caaacccgtg cacagcgccg cgcccatcct gcacgtgccc ccggcccggg cgggccccca
181 gccctgctac ctgaagttgg gaagcaaggt ggaggtgagc aagaccacct atcctagcca
241 gatccccctg aaatcgcagg tgctgcaggg gctgcaggag ccagcggggg aggggctccc
301 gctgcggaag agcggctcgg tggaaaacgg gttcgatacc cagatctaca cagactgggc
361 caatcattac ctagccaaat ccggccacaa gcgtctcatc agggatctcc agcaagatgt
421 gacagatggc gtcctcctgg cccagattat ccaggttgtg gcaaatgaaa agattgaaga
481 catcaatggc tgtccgaaga acagatccca aatgattgaa aacatagatg cctgcttgaa
541 tttcctggca gctaagggaa taaacatcca ggggctgtct gcagaagaga tcaggaatgg
601 aaacctcaag gccattctag gcctcttctt cagcctctcc cgatacaagc agcagcagca
661 gcagccccag aagcagcacc tctcctcacc tctgccgccc gccgtatccc aggtggccgg
721 ggccccctcc cagtgccagg ctggcacccc tcagcagcag gtgccagtca ctccccaagc
781 cccgtgccag cctcaccagc cagcaccaca tcagcagtca aaagcacaag ctgaaatgca
841 gtccagactt ccaggtccta ccgcgagggt atccgctgca ggcagcgagg ccaaaacacg
901 cggagggtca actactgcta acaaccgacg cagccagagc tttaacaact atgataaatc
961 caaaccagtc acctccccac ccccaccgcc aagcagccac gagaaagagc ctttggcaag
1021 ttcagcctcc tcccaccccg gaatgagtga caatgcacct gcttccttgg agagcggcag
1081 cagctccacc cctactaatt gcagtacctc ctcggccatc ccgcagcccg gtgcagccac
1141 caagccttgg cgcagcaaat ccctcagcgt gaagcacagt gccacggtat ccatgctctc
1201 ggtcaagcct cctgggcctg aggcccccag gcccacacct gaagccatga agccggcccc
1261 caacaatcag aagtccatgc tggaaaagct gaaacttttc aacagtaaag ggggctcaaa
1321 ggcaggtgag gggccggggt cccgggacac aagctgtgag cggctggaga ctctgcccag
1381 cttcgaagag agcgaggagc tggaggccgc cagtcgcatg ctcaccaccg tgggccctgc
1441 ttccagcagc cccaagattg cactcaaggg cattgcccag aggactttta gccgggcact
1501 gaccaacaag aagagttctc tgaaaggcaa tgagaaagag aaggagaaac aacagcggga
1561 gaaggataag gagaaaagca aggaccttgc caagagagcc tctgtgacgg agaggctgga
1621 cctcaaggag gagccaaaag aagaccccag tggagcagct gtgcccgaga tgccaaaaaa
1681 gtcctccaag attgccagct tcatccccaa aggggggaag ctcaacagtg ccaagaagga
1741 gcccatggcc ccttcccaca gtggaatacc aaaaccagga atgaagagca tgcccgggaa
1801 atccccaagt gccccagcgc cttccaagga aggggagcgg agccggagtg ggaagctgag
1861 ctcaggactc ccccagcaga agccccagct ggacggcaga cactccagtt cctcttccag
1921 cctggcgtcc tcagaaggaa aaggcccagg agggaccacc ctgaaccaca gcatcagcag
1981 ccagactgtc agtgggtctg tcgggaccac ccagaccaca ggaagcaata ccgtcagtgt
2041 tcagctacct cagccccagc agcaatacaa ccatcccaac actgccacgg ttgcaccttt
2101 cctgtacagg tctcagacgg acactgaagg gaatgttact gccgagtcaa gctcaacagg
2161 tgtgagcgtg gagcccagcc acttcaccaa gactggacag cctgctctgg aagaactcac
2221 tggggaagat cctgaggctc ggcggctgcg gacagtgaag aacatcgctg atctgcggca
2281 gaatttggag gaaaccatgt ccagtttaag gggaactcag gttacacaca gcacattgga
2341 aaccacgttt gacaccaatg tcaccacgga gatgagtggc cgtagcatac tcagcttgac
2401 agggaggccc acacctctgt cctggagact gggccagtcc agccctcggc tccaagcagg
2461 agacgccccc tcaatgggca atgggtatcc ccctcgagcc aacgccagca ggttcatcaa
2521 cactgagtca ggtcgctatg tgtactccgc ccctctgaga aggcagctgg cctcccgggg
2581 cagtagtgtc tgccacgtgg acgtctcaga caaggcagga gatgagatgg acctggaagg
2641 catcagcatg gacgcccccg gctacatgag cgatggggat gttctgagca agaacatccg
2701 gaccgatgac attacaagcg gatacatgac tgatggtgga cttggcctct atacccgtcg
2761 cctgaaccgg ctccctgatg ggatggctgt ggtacgagag accctgcaac gaaatacctc
2821 cctgggcctc ggagacgctg acagctggga cgacagcagc tccgtcagca gcggcatcag
2881 cgacaccata gacaacctca gcactgatga catcaacacc agctcctcca tcagctctta
2941 tgccaacaca cctgcctcct ctcgaaaaaa cctggatgtg cagactgatg ctgagaagca
3001 ctcacaggtg gagaggaatt ccctgtggtc tggtgatgat gtcaagaaat cagacggagg
3061 ctcagacagc ggcataaaaa tggagccagg ttccaagtgg aggcggaatc cttctgatgt
3121 gtctgacgag tccgacaaaa gcacgtcggg caagaagaat cctgtcatct cccagacagg
3181 ctcatggcgg cgaggcatga cagctcaggt gggcatcacc atgccaagga cgaaggcttc
3241 agccccggca ggcgcactga agaccccagg aactggaaaa acagacgacg caaaggtgtc
3301 tgagaaagga aggctttctc ctaaagcctc ccaggtgaag cgctccccat cagatgcagg
3361 ccggagcagt ggtgacgaat ccaaaaagcc cctccccagc agctctagga cacctactgc
3421 caatgccaac agctttgggt tcaagaagca gagtggttcc gccgccggcc tggccatgat
3481 cacagccagc ggggtgactg tcaccagcag gtcagccaca ctgggcaaaa tcccaaagtc
3541 atctgcactc gtcagtcggt ctgctggtcg gaagtcaagt atggatgggg ctcagaatca
3601 ggatgacggg tatctagccc taagctcccg gacaaacctt cagtaccgga gtttgccgag
3661 gcccagtaag tccaacagcc ggaacggggc tgggaacagg tctagcacca gcagcataga
3721 ttccaacatt agcagcaagt ccgcaggcct gccagtgccc aaactgaggg agccttccaa
3781 aacagcccta ggcagctctc taccaggtct ggtcaaccaa acagacaagg agaaaggcat
3841 ctcatcagac aacgagagtg tggcttcctg taactcggtg aaagtgaatc cggcagccca
3901 gcctgtgtcc agtccggctc agaccagtct ccagcctgga gccaagtacc cagatgtggc
3961 ctctcccaca ctccgcagac tctttggtgg gaagcctacc aagcaagtgc ccatcgccac
4021 agctgaaaac atgaaaaatt cggtggtcat ctccaatcct catgccacca tgactcagca
4081 aggtaaccta gactccccgt caggcagtgg cgtcctgagc agtgggagca gcagtcctct
4141 ctacagcaag aatgtggacc tcaaccagtc tccgctagcc tccagcccca gctcagccca
4201 ctcggcccct tccaacagcc tcacctgggg caccaacgcc agcagctcct ccgcagttag
4261 caaggatggc ctgggctttc agtctgtcag cagcctccac accagctgtg agtccatcga
4321 catctccctc agcagtggag gggtccccag ccacaattct tccactggtc tcatcgcctc
4381 ctccaaggac gactccttga ctccctttgt cagaactaac agtgtgaaga ccacactgtc
4441 agaaagccct ctctcttccc ctgctgctag ccctaagttc tgcagaagta ctctgcccag
4501 gaaacaggac agtgacccgc accttgatag gaacactttg cctaagaaag gactcaggta
4561 tactcccacc tcccagcttc gcacgcaaga agatgcaaaa gaatggttac ggtcccattc
4621 tgcaggaggc cttcaggaca ccgctgccaa ttcccccttt tcctctggct ccagcgtgac
4681 ttctccctcc ggaacaagat tcaacttttc ccagcttgcg agtcccacca ctgtcaccca
4741 gatgagcttg tccaacccga ccatgctgag gactcacagc ctctccaatg ctgatgggca
4801 gtatgatcca tacactgaca gccgcttccg gaatagctcc atgtccctgg atgagaagag
4861 cagaaccatg agccgttcag gctcattccg ggatgggttt gaagaagttc atggatcctc
4921 actctccttg gtttccagca catcgtcagt ttattctaca ccagaagaaa aatgccagtc
4981 agagattcgc aagctgcggc gggaactgga tgcctcccag gagaaagttt cagctttgac
5041 cacccagctg acagcaaacg ctcaccttgt ggcagccttt gaacagagtc ttggtaacat
5101 gacaatcagg ctccagagtc tgaccatgac agctgagcag aaggactcag aactgaatga
5161 gttaagaaaa accattgagc tgctaaagaa acagaacgca gctgcccagg ctgccattaa
5221 tggagtaatt aacacacctg agctcaactg caaaggaaac ggcactgccc agtctgcaga
5281 cctccgcatc cgcaggcagc actcctcaga cagcgtctcc agcatcaaca gtgccaccag
5341 ccactccagc gtgggcagca acatagagag tgactcaaag aagaagaagc ggaagaactg
5401 ggtcaatgag ttacgcagct ccttcaagca agctttcggg aagaagaagt ccccaaaatc
5461 tgcgtcctct cattcagata ttgaggagat gacggattct tctttgcctt cctcaccaaa
5521 gttaccgcac aatgggtcca caggttccac cccactgctg aggaattctc actccaactc
5581 tctaatttca gaatgcatgg atagtgaagc tgagaccgtc atgcagctcc gaaatgagtt
5641 aagagacaag gagatgaagc tgacggatat ccgcttagaa gctctcagtt ctgcccacca
5701 gctggaccag ctccgggagg ccatgaacag gatgcagagt gaaatagaga agctgaaagc
5761 tgagaatgat cggctgaagt cagagtctca aggcagtggc tgcagccggg ctccttccca
5821 agtgtccatc tctgcctccc cgaggcagtc catgggcctc tcccagcaca gcttgaacct
5881 cactgagtca accagcctgg acatgttgct ggatgacact ggtgaatgct cggctcggaa
5941 ggaaggaggc aggcatgtta agatagttgt cagctttcag gaggaaatga agtggaagga
6001 ggattccaga ccacatctct ttcttattgg ctgcattgga gttagtggca agacgaagtg
6061 ggatgtgctc gatggggtgg ttagacggct gttcaaagaa tacatcattc atgtcgaccc
6121 agtgagtcag ctagggctga attcagacag cgttcttggc tacagcattg gagaaatcaa
6181 gcgcagcaac acttccgaaa caccggagct gcttccttgt ggctatctgg ttggagagaa
6241 cacgaccatc tcagtgaccg tgaaagggct cgcagaaaac agcctggact cactggtgtt
6301 tgagtccttg attcccaagc ccatcctgca gcgctacgtc tccctcctga tagagcaccg
6361 tcggatcatt ctctctggcc ccagcggcac tgggaaaacc tacctggcca accggctgtc
6421 tgagtatata gtgcttcgag agggacggga gttgacagac ggggttatcg ccacctttaa
6481 cgtggaccat aagtccagca aggaattgcg ccagtacctg tccaaccttg ctgaccagtg
6541 caacagtgag aacaatgctg tggacatgcc cctcgtcatc atcctggaca acctacacca
6601 cgtgagctct ctgggcgaga tcttcaatgg gctgctcaac tgcaagtacc acaaatgccc
6661 ttacataatt ggcacaatga accaggctac ctcttcgact cccaacctgc agcttcacca
6721 taacttcaga tgggtgcttt gtgccaacca cacggagcct gtgaagggtt tccttggccg
6781 attcctgagg aggaagctca tggaaacaga gatcagtggg cgggtgcgca atatggagct
6841 ggtaaaaatc attgactgga ttcccaaggt ctggcatcac ctcaaccgct tcctggaggc
6901 tcacagttcc tcggacgtca ccatcggccc ccggctcttc ctgtcatgcc ccatcgatgt
6961 ggacggctcg agagtgtggt tcaccgactt gtggaactat tccattatcc cctatctcct
7021 ggaagccgtc agagaaggac tccagctcta tggaaggcgc gccccctggg aggatcctgc
7081 caagtgggtg atggacacat atccatgggc agccagccca caacagcacg agtggcctcc
7141 cctgctgcag ttacggcctg aggatgtcgg cttcgacggc tactccatgc ctcgggaggg
7201 atcgacaagc aagcagatgc cccccagtga tgctgaaggt gacccgctga tgaacatgct
7261 gatgaggctg caggaggcag ccaactactc cagcccccag agctatgaca gcgactccaa
7321 cagcaacagc catcacgatg acatcttgga ctcctctttg gagtccactc tgtgacaggg
7381 gcccggagcc cagcgccctc ctcttctcct caccgcattc cacctgcatc ccccacatca
7441 ccctgaagat gacttcctga gccagccccc agccacagcc ttagagctgc gggaacaccg
7501 agaccccccg tccttcagcc tcgacctggg tgcaggcatc ccgggccagc tgcctgcgga
7561 ccgcttcctt ccacagcgag aactgcacta ccttctgttg tactttaatt attgttttgc
7621 cttgttgctg tgac
//