LOCUS AF390562 6221 bp mRNA linear HUM 22-OCT-2002
DEFINITION Homo sapiens TBP-associated factor RNA polymerase 1-like (TAF1L)
mRNA, complete cds.
ACCESSION AF390562
VERSION AF390562.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6221)
AUTHORS Wang,P.J. and Page,D.C.
TITLE Functional substitution for TAF(II)250 by a retroposed homolog that
is expressed in human spermatogenesis
JOURNAL Hum. Mol. Genet. 11 (19), 2341-2346 (2002)
PUBMED 12217962
REFERENCE 2 (bases 1 to 6221)
AUTHORS Wang,P.J. and Page,D.C.
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) Whitehead Institute, 9 Cambridge Center,
Cambridge, MA 02142, USA
FEATURES Location/Qualifiers
source 1..6221
/db_xref="H-InvDB:HIT000078830"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="9"
/tissue_type="testis"
gene 1..6221
/gene="TAF1L"
/gene_synonym="TAF2A2"
CDS 96..5576
/gene="TAF1L"
/gene_synonym="TAF2A2"
/note="similar to TAFII250"
/codon_start=1
/product="TBP-associated factor RNA polymerase 1-like"
/protein_id="AAN40840.1"
/translation="MRPGCDLLLRAAATVTAAIMSDSDSEEDSSGGGPFTLAGILFGN
ISGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTANEELTGTGGALVNDEGWIRS
TEDAVDYSDINEVAEDESQRHQQTMGSLQPLYHSDYDEDDYDADCEDIDCKLMPPPPP
PPGPMKKDKDQDAITCVSESGEDIILPSIIAPSFLASEKVDFSSYSDSESEMGPQEAT
QAESEDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLHLFGPGKNVPSVWR
SARRKRKKHRELIQEEQIQEVECSVESEVSQKSLWNYDYAPPPPPEQCLADDEITMMV
PVESKFSQSTGDVDKVTDTKPRVAEWRYGPARLWYDMLGVSEDGSGFDYGFKLRKTQH
EPVIKSRMMEEFRKLEESNGTDLLADENFLMVTQLHWEDSIIWDGEDIKHKGTKPQGA
SLAGWLPSIKTRNVMAYNVQQGFAPTLDDDKPWYSIFPIDNEDLVYGRWEDNIIWDAQ
AMPRLLEPPVLALDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRILLGKTGV
IREEPQQNMSQPEVKDPWNLSNDEYYFPKQQGLRGTFGGNIIQHSIPAMELWQPFFPT
HMGPIKIRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGELF
FMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGE
TVYCHTSPFLGSLHPGQLLQALENNLFRAPVYLHKMPETDFLIIRTRQGYYIRELVDI
FVVGQQCPLFEVPGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSH
SESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAK
QRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVHAAPWNTTRAFIAAMKGKCLLEVTGV
ADPTGCGEGFSYVKIPNKPTQQKDDKEPQAVKKTVTGTDADLRRLSLKNAKQLLRKFG
VPEEEIKKLSRWEVIDVVRTMSTEQAHSGEGPMSKFARGSRFSVAEHQERYKEECQRI
FDLQNKVLSSTEVLSTDTDSISAEDSDFEEMGKNIENMLQNKKTSSQLSREWEEQERK
ELRRMLLVAGSAASGNNHRDDVTASMTSLKSSATGHCLKIYRTFRDEEGKEYVRCETV
RKPAVIDAYVRIRTTKDEKFIQKFALFDEKHREEMRKERRRIQEQLRRLKRNQEKEKL
KGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNVPPSKPVAMTEEQEE
ELEKTVIHNDNEELIKVEGTKIVFGKQLIENVHEVRRKSLVLKFPKQQLPPKKKRRVG
TTVHCDYLNIPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTHPFHTPVNAKVVKDY
YKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD
LCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVN
KKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTK
TAQEIVNICYQTITEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTSQPPDM
YDTNTSLSTSRDASVFQDESNLSVLDISTATPEKQMCQGQGRLGEEDSDVDVEGYDDE
EEDGKPKPPAPEGGDGDLADEEEGTVQQPEASVLYEDLLISEGEDDEEDAGSDEEGDN
PFSAIQLSESGSDSDVGYGGIRPKQPFMLQHASGEHKDGHGK"
BASE COUNT 1842 a 1321 c 1579 g 1479 t
ORIGIN
1 agctgccccg cctttattca gcttccggta gacgctggta gggtaaggga gctaagtaga
61 tcacttccgg gcgactgttg ttttatttcc ggtttatgcg acccggctgc gatttgctgc
121 tgagggcagc agctaccgtc actgccgcca tcatgtcaga ctcggacagc gaggaagatt
181 catctggagg tggcccattt actttagcgg gtatcctttt cggcaacatc agtggagcgg
241 ggcagctgga gggggaaagc gtcttggatg atgagtgtaa gaagcacttg gcaggcttgg
301 gggctttggg gctgggcagc ctaatcactg aactcacggc aaatgaagaa ttgactggga
361 ctggcggtgc cttggtaaat gatgaagggt ggattaggag tacagaagat gctgtagact
421 attcagacat caatgaggtg gcagaagatg aaagccaaag acaccagcag acgatgggga
481 gcttgcagcc cctttaccac tcggattatg atgaagatga ctatgatgct gattgtgaag
541 acattgattg caagttgatg cctcctccac ctccaccccc gggaccaatg aagaaggata
601 aggaccaaga tgctattacc tgtgtgtctg aaagtggaga agacatcatc ttgccctcca
661 tcattgcccc ttcctttttg gcctcagaga aagtggattt cagtagttac tctgattcag
721 aatctgagat gggacctcag gaagcaacac aggcagaatc tgaggatgga aagctgaccc
781 ttccattggc tgggattatg cagcatgatg ccaccaagct gttgccaagt gtcaccgaac
841 tttttccaga atttcgacct ggaaaagtgt tacgcttcct acatcttttt ggaccaggga
901 agaatgtccc atctgtttgg cggagtgctc ggagaaagag gaagaagcat cgtgagctga
961 tacaggaaga gcagatccag gaggtggaat gctcagtaga atcagaagtc agccagaagt
1021 ctttgtggaa ctatgactat gctccaccac cacccccaga gcagtgtctc gctgatgatg
1081 aaatcacgat gatggttcct gtggagtcca aattttccca atcaactgga gatgtagata
1141 aagtgacaga taccaaacca agagtggctg agtggcgtta tgggcctgcc cgactgtggt
1201 atgatatgct gggtgtctcc gaagatggca gtgggtttga ctatggcttc aaactgagaa
1261 agacacaaca tgaacctgtg ataaaatcta gaatgatgga ggaatttagg aaacttgagg
1321 aaagcaatgg cactgatctt ctggctgacg aaaacttcct gatggtgaca cagctgcatt
1381 gggaggattc tatcatctgg gatggggagg atatcaaaca caaagggaca aaacctcagg
1441 gtgcaagcct ggcaggctgg cttccttcta ttaagactag gaatgtaatg gcttacaatg
1501 ttcagcaagg ttttgcaccc actctggatg atgacaaacc ttggtactcc atttttccca
1561 ttgacaatga ggatctggtg tatggacgct gggaggacaa tatcatttgg gatgctcagg
1621 ccatgccccg gctgttggaa cctcctgttt tggcacttga tcccaatgat gagaacctca
1681 ttttggaaat tcctgatgag aaggaagagg ccacctctaa ctccccctcc aaggagagta
1741 agaaggaatc atctctgaag aagagtcgaa ttctcttggg caaaacaggt gtcatcaggg
1801 aggaaccaca gcagaacatg tctcagccag aagtgaaaga tccatggaat ctctccaatg
1861 atgagtatta tttccccaag caacagggtc ttcggggcac ctttggaggg aatattatcc
1921 agcattcaat tcctgctatg gaattatggc agcccttctt tcccacccac atggggccca
1981 tcaaaatccg gcagttccat cgcccacctc tgaaaaagta ctcatttggt gcactctctc
2041 agccaggtcc ccattcagtc caacctttgc taaagcacat caaaaaaaag gccaagatga
2101 gagaacaaga gaggcaagcc tcaggtggtg gagagttgtt ttttatgcgc acacctcagg
2161 atctcacagg caaagatgga gatcttattc ttgcagaata tagtgaggaa aatggaccct
2221 taatgatgca ggttggcatg gcaaccaaga taaagaacta ttataaacgg aaacctggca
2281 aagatcctgg agcaccagat tgtaaatatg gggaaactgt ttactgccat acatctcctt
2341 tcttgggctc tctccatcct ggccaattac tgcaggcact tgagaacaac ctttttcgtg
2401 ctccagtgta tcttcataag atgccagaaa ctgattttct gatcattcgg acaagacagg
2461 gttactatat tcgggaatta gtggatattt ttgtggttgg ccagcagtgt cccttgtttg
2521 aagttcctgg gcctaactcc agaagggcca atatgcatat tcgagacttt ctacaggttt
2581 ttatttaccg ccttttctgg aagagtaaag atcggccacg gaggatacga atggaagata
2641 taaaaaaagc ctttccttcc cattcagaaa gcagcatccg gaagaggcta aagctctgcg
2701 ctgacttcaa acgcacaggg atggattcaa actggtgggt gcttaagtct gattttcgtt
2761 taccaacgga agaagagatc agagctaagg tgtcaccaga gcagtgctgt gcttattata
2821 gcatgatagc tgcaaagcaa cgactgaagg atgctggcta tggtgagaaa tccttttttg
2881 ccccagaaga agaaaatgag gaagatttcc agatgaagat tgatgatgaa gttcacgctg
2941 ctccttggaa caccacaagg gccttcattg ctgccatgaa gggcaagtgt ctcctagagg
3001 tgactggggt ggcagatccc acagggtgtg gtgaaggatt ctcctatgtg aagattccaa
3061 ataaaccaac acagcagaag gatgataaag agccacaggc agtgaagaag acagtgacag
3121 gaacagatgc agaccttcgt cgcctttccc tgaaaaatgc caagcaactt ctacgtaaat
3181 ttggtgtgcc tgaggaagag attaaaaagt tgtcccgctg ggaagtgatt gatgtggtgc
3241 gcacaatgtc aacagaacag gctcattctg gagaggggcc catgagtaaa tttgcccgtg
3301 gatcaaggtt ttctgtggct gagcatcaag agcgttacaa agaggaatgt cagcgtatct
3361 ttgacctaca gaacaaggtt ctgtcatcaa ctgaggtctt atcaactgac acagacagca
3421 tctcagctga agatagtgac tttgaagaaa tgggaaagaa cattgagaac atgttgcaga
3481 acaagaaaac cagctctcag ctgtcacgtg aatgggagga gcaggagcgg aaggaactac
3541 ggcgaatgct actggtagca ggctcagcag catcaggaaa caatcacaga gatgatgtca
3601 cagcttccat gactagcctt aagtcttctg ccactggaca ctgtctcaag atttatcgca
3661 catttcgaga tgaagagggg aaagagtatg ttcgctgtga gacagtccga aaaccagctg
3721 tcattgatgc ctatgtgcgc atacggacta caaaagatga gaaattcatt caaaaatttg
3781 ccctttttga tgaaaaacat cgggaagaga tgcggaaaga acggcggagg attcaagagc
3841 aactgaggcg gcttaagcgg aaccaggaaa aggagaagct taagggtcct cctgagaaga
3901 agcccaagaa aatgaaagag cgtcctgacc taaaactgaa atgtggggca tgtggtgcca
3961 ttggacatat gaggactaac aaattctgcc ccctctatta tcaaacaaat gtgccacctt
4021 cgaaacctgt tgccatgaca gaagagcagg aggaggagtt ggaaaagaca gtcattcata
4081 atgataatga agaacttatc aaggttgaag ggaccaaaat tgtcttcggg aaacagctaa
4141 ttgagaatgt gcatgaggtt cgcagaaaat ctctggttct caagtttcct aaacagcagc
4201 ttcctccaaa gaagaaacgg cgagttggaa ccactgttca ttgtgactat ttgaatatac
4261 ctcataagtc catccaccga cgccgcacag accctatggt gacgctgtca tccatcctgg
4321 agtctatcat caatgacatg agagatcttc caaatacaca ccctttccac actccagtca
4381 atgcaaaggt tgtaaaggac tactacaaaa tcatcactcg gccaatggac ctacaaacac
4441 tccgtgaaaa tgtgcgtaaa tgcctctacc catctcggga agagttcaga gagcatctgg
4501 agctaattgt gaaaaacagt gcgacctaca atgggccaaa acattcattg actcagatct
4561 ctcaatccat gctggatctc tgtgatgaaa aacttaaaga gaaagaagac aaattagctc
4621 gcttagagaa agctatcaac cccttgctgg atgatgatga ccaagtggca ttttctttca
4681 ttctggacaa cattgtcacc cagaaaatga tggcagttcc agattcttgg ccatttcatc
4741 acccagttaa taagaagttt gttccagatt attacaaaat gattgtcaat ccagtggatt
4801 tagagaccat acgtaagaac atctccaagc acaagtatca gagtcgggag agttttctag
4861 atgatgtaaa ccttattctt gccaacagtg ttaagtataa tggacctgag agtcagtaca
4921 ctaagactgc tcaggagatt gtgaacatct gttaccagac aattactgag tatgatgagc
4981 atttgactca acttgagaag gatatttgta cagctaaaga agcagctttg gaggaagcag
5041 aattagaaag cctggaccca atgaccccag ggccctacac atctcagcct cctgatatgt
5101 atgataccaa cacatccctc agtacgtctc gagatgcctc tgtatttcaa gatgagagca
5161 atttgtctgt cttggatatt tccactgcca ctccagaaaa acagatgtgc cagggccaag
5221 gtaggctggg tgaggaagac tctgatgtgg atgttgaagg gtatgatgat gaggaggagg
5281 atgggaaacc taagcctcca gccccagaag ggggagatgg tgatcttgca gatgaagagg
5341 aaggaactgt acaacaacct gaagccagtg tcctgtatga ggatttgctt atatctgaag
5401 gagaagatga tgaggaagat gctgggagtg acgaagaagg agacaatcct ttctctgcta
5461 tccagctgag tgaaagtgga agtgactctg atgtgggata tggtggaata agacccaaac
5521 aacccttcat gcttcagcat gcttcaggag aacacaagga tgggcacgga aaatgaagaa
5581 agcatgatgt cccatgaggg agacggtggg gaggcttccc atgatttgga ggatagcaac
5641 atcagttatg ggagctgtga ggagcctgat cccaagttga acacccaaga cacaagcttc
5701 agcagcatcg gaaatttcca gctgggcatg gtggctcaca cctgtaatct cagcactctg
5761 ggaggccgag gcgggtggat cacctgaggt cagttcgaga ccagcttggc caacatgtcg
5821 aaacttcatc tctactaaaa atacaaaaat tagccaggtg tggtggtgca cgcctgtaat
5881 ccccagatac tcgggaggct gaagcaggag aattgcttga acccgggagg cagaggttgc
5941 agtgagtgga gatcacgcca ctgcgctcca gcctgggcga aagagtgaga ctccatctca
6001 aaaaaaaaga aaatttccaa gcatggtatc atctcacttt tctaatttac aggctggaac
6061 agatgagagc cctcctgctg ggacagagaa ttgggttcta gtggactctg ctacacttaa
6121 acctatgtga caaaccgccc attattttat tgtttattta attatacaat gcctcgttcc
6181 tatatggatt tgaggcaaat taccataaat tttgaaacag c
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