LOCUS AF389420 5601 bp mRNA linear HUM 06-MAR-2003
DEFINITION Homo sapiens NOD27 (NOD27) mRNA, complete cds.
ACCESSION AF389420
VERSION AF389420.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5601)
AUTHORS Dowds,T.A., Masumoto,J., Chen,F.F., Ogura,Y., Inohara,N. and
Nunez,G.
TITLE Regulation of cryopyrin/Pypaf1 signaling by pyrin, the familial
Mediterranean fever gene product
JOURNAL Biochem. Biophys. Res. Commun. 302 (3), 575-580 (2003)
PUBMED 12615073
REFERENCE 2 (bases 1 to 5601)
AUTHORS Inohara,N.
TITLE Direct Submission
JOURNAL Submitted (04-JUN-2001) CCGC, University of Michigan, 1500 E.
Medical Center Dr., Ann Arbor, MI 48109, USA
FEATURES Location/Qualifiers
source 1..5601
/db_xref="H-InvDB:HIT000078813"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="16"
gene 1..5601
/gene="NOD27"
CDS 1..5601
/gene="NOD27"
/note="NOD family member"
/codon_start=1
/product="NOD27"
/protein_id="AAO59377.1"
/translation="MDPVGLQLGNKNLWSCLVRLLTKDPEWLNAKMKFFLPNTDLDSR
NETLDPEQRVILQLNKLHVQGSDTWQSFIHCVCMQLEVPLDLEVLLLSTFGYDDGFTS
QLGAEGKSQPESQLHHGLKRPHQSCGSSPRRKQCKKQQLELAKKYLQLLRTSAQQRYR
SQIPGSGQPHAFHQVYVPPILRRATASLDTPEGAIMGDVKVEDGADVSISDLFNTRVN
KGPRVTVLLGKAGMGKTTLAHRLCQKWAEGHLNCFQALFLFEFRQLNLITRFLTPSEL
LFDLYLSPESDHDTVFQYLEKNADQVLLIFDGLDEALQPMGPDGPGPVLTLFSHLCNG
TLLPGCRVMATSRPGKLPACLPAEAAMVHMLGFDGPRVEEYVNHFFSAQPSREGALVE
LQTNGRLRSLCAVPALCQVACLCLHHLLPDHAPGQSVALLPNMTQLYMQMVLALSPPG
HLPTSSLLDLGEVALRGLETGKVIFYAKDIAPPLIAFGATHSLLTSFCVCTGPGHQQT
GYAFTHLSLQEFLAALHLMASPKVNKDTLTQYVTLHSRWVQRTKARLGLSDHLPTFLA
GLASCTCRPFLSHLAQGNEDCVGAKQAAVVQVLKKLATRKLTGPKVVELCHCVDETQE
PELASLTAQSLPYQLPFHNFPLTCTDLATLTNILEHREAPIHLDFDGCPLEPHCPEAL
VGCGQIENLSFKSRKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPL
CPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP
TVRMLQARERTIIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQV
HDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIARKLDLSDNGLSVAG
VHCVLRAVSACWTLAELHISLQHKTVIFMFAQEPEEQKGPQERAAFLDSLMLQMPSEL
PLSSRRMRLTHCGLQEKHLEQLCKALGGSCHLGHLHLDFSGNALGDEGAARLAQLLPG
LGALQSLNLSENGLSLDAVLGLVRCFSTLQWLFRLDISFESQHILLRGDKTSRDMWAT
GSLPDFPAAAKFLGFRQRCIPRSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCEF
LSDQSLETLLDCLPQLPQLSLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHA
TLHFRSNEEEEGVCCGRFTGCSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRC
LLECLPQVPISGLLDLSHNSISQESALYLLETLPSCPRVREASVNLGSEQSFRIHFSR
EDQAGKTLRLSECSFRPEHVSRLATGLSKSLQLTELTLTQCCLGQKQLAILLSLVGRP
AGLFSLRVQEPWADRARVLSLLEVCAQASGSVTEISISETQQQLCVQLEFPRQEENPE
AVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLSLS
ELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML
KRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEE
LDLSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELM
LGCNALGDPTALGLAQELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAEN
NLAGGVLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEA
AAELAQVLPKMGRLKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQ
HLKSQEPRLDFAFFDNQPQAPWGT"
BASE COUNT 1140 a 1711 c 1607 g 1143 t
ORIGIN
1 atggaccccg ttggcctcca gctcggcaac aagaacctgt ggagctgtct tgtgaggctg
61 ctcaccaaag acccagaatg gctgaacgcc aagatgaagt tcttcctccc caacacggac
121 ctggattcca ggaacgagac cttggaccct gaacagagag tcatcctgca actcaacaag
181 ctgcatgtcc agggttcgga cacctggcag tctttcattc attgcgtgtg catgcagctg
241 gaggtgcctc tggacctgga ggtgcttctg ctaagtactt ttggctatga tgatgggttc
301 accagccagc tgggagctga ggggaaaagc caacctgaat ctcagctcca ccatggcctg
361 aagcgcccac atcagagctg tgggtcctca ccccgccgga agcagtgcaa gaagcagcag
421 ctagagttgg ccaagaagta cctgcagctc ctgcggacct ctgcccagca gcgctacagg
481 agccaaatcc ctgggtcagg gcagccccac gccttccacc aggtctatgt ccctccaatc
541 ctgcgccggg ccacagcatc cttagacact ccggaggggg ccattatggg ggacgtcaag
601 gtggaagatg gtgctgacgt gagcatctcg gacctcttca acaccagggt taacaagggc
661 ccgagggtga ccgtgctttt ggggaaggct ggcatgggca agaccacgct ggcccaccgg
721 ctctgccaga agtgggcaga gggccatctg aactgtttcc aggccctgtt cctttttgaa
781 ttccgccagc tcaacttgat cacgaggttc ctgacaccgt ccgagctcct ttttgatctg
841 tacctgagcc ctgaatcgga ccacgacact gtcttccagt acctggagaa gaacgctgac
901 caagtcctgc tgatctttga tgggctagat gaggccctcc agcctatggg tcctgatggc
961 ccaggcccag tcctcaccct tttctcccat ctctgcaatg ggaccctcct gcctggctgc
1021 cgggtgatgg ctacctcccg tccagggaag ctgcctgcct gcctgcctgc agaggcagcc
1081 atggtccaca tgttgggctt tgatgggcca cgggtggaag aatatgtgaa tcacttcttc
1141 agcgcccagc catcgcggga gggggccctg gtggagttac agacaaatgg acgtctccga
1201 agcctgtgtg cggtgcccgc actgtgccaa gtcgcctgtc tctgcctcca ccatctgctt
1261 cctgaccacg ccccaggcca gtctgtggcc ctcctgccca acatgactca gctctatatg
1321 cagatggtgc tcgccctcag cccccctggg cacttgccca cctcgtccct actggacctg
1381 ggggaggtgg ccctgagggg cctggagaca gggaaggtta tcttctatgc aaaagatatt
1441 gctccaccct tgatagcttt tggggccact cacagcctgc tgacttcctt ctgcgtctgc
1501 acaggccctg ggcaccagca gacaggctat gctttcaccc acctcagcct gcaggagttt
1561 cttgctgccc tgcacctgat ggccagcccc aaggtgaaca aagacacact tacccagtat
1621 gttaccctcc attcccgctg ggtacagcgg accaaagcta gactgggcct ctcagaccac
1681 ctccccacct tcctggcggg cctggcatcc tgcacctgcc gccccttcct tagccacctg
1741 gcgcagggca atgaggactg tgtgggtgcc aagcaggctg ctgtagtgca ggtgttgaag
1801 aagttggcca cccgcaagct cacagggcca aaggttgtag agctgtgtca ctgtgtggat
1861 gagacacagg agcctgagct ggccagtctc accgcacaaa gcctccccta tcaactgccc
1921 ttccacaatt tcccactgac ctgcaccgac ctggccaccc tgaccaacat cctagagcac
1981 agggaggccc ccatccacct ggattttgat ggctgtcccc tggagcccca ctgccctgag
2041 gctctggtag gctgtgggca gatagagaat ctcagcttta agagcaggaa gtgtggggat
2101 gcctttgcag aagccctctc caggagcttg ccgacaatgg ggaggctgca gatgctgggg
2161 ttagcaggaa gtaaaatcac tgcccgaggc atcagccacc tggtgaaagc tttgcctctc
2221 tgtccacagc tgaaagaagt cagttttcgg gacaaccagc tcagtgacca ggtggtgctg
2281 aacattgtgg aggttctccc tcacctacca cggctccgga agcttgacct gagcagcaac
2341 agcatctgcg tgtcaaccct actctgcttg gcaagggtgg cagtcacgtg tcctaccgtc
2401 aggatgcttc aggccaggga gcggaccatc atcttccttc tttccccgcc cacagagaca
2461 actgcagagc tacaaagagc tccagacctg caggaaagtg acggccagag gaaaggggct
2521 cagagcagaa gcttgacgct caggctgcag aagtgtcagc tccaggtcca cgatgcggag
2581 gccctcatag ccctgctcca ggaaggccct cacctggagg aagtggacct ctcagggaac
2641 cagctggaag atgaaggctg tcggctgatg gcagaggctg catcccagct gcacatcgcc
2701 aggaagctgg acctcagcga caacgggctt tctgtggccg gggtgcattg tgtgctgagg
2761 gccgtgagtg cgtgctggac cctggcagag ctgcacatca gcctgcagca caaaactgtg
2821 atcttcatgt ttgcccagga gccagaggag cagaaggggc cccaggagag ggctgcattt
2881 cttgacagcc tcatgctcca gatgccctct gagctgcctc tgagctcccg aaggatgagg
2941 ctgacacatt gtggcctcca agaaaagcac ctagagcagc tctgcaaggc tctgggagga
3001 agctgccacc tcggtcacct ccacctcgac ttctcaggca atgctctggg ggatgaaggt
3061 gcagcccggc tggctcagct gctcccaggg ctgggagctc tgcagtcctt gaacctcagt
3121 gagaacggtt tgtccctgga tgccgtgttg ggcttggttc ggtgcttctc cactctgcag
3181 tggctcttcc gcttggacat cagctttgaa agccaacaca tcctcctgag aggggacaag
3241 acaagcaggg atatgtgggc cactggatct ttgccagact tcccagctgc agccaagttc
3301 ttagggttcc gtcagcgctg catccccagg agcctctgcc tcagtgagtg tcctctggag
3361 cccccaagcc tcacccgcct ctgtgccact ctgaaggact gcccgggacc cctggaactg
3421 caattgtcct gtgagttcct gagtgaccag agcctggaga ctctactgga ctgcttacct
3481 caactccctc agctgagcct gctgcagctg agccagacgg gactgtcccc gaaaagcccc
3541 ttcctgctgg ccaacacctt aagcctgtgt ccacgggtta aaaaggtgga tctcaggtcc
3601 ctgcaccatg caactttgca cttcagatcc aacgaggagg aggaaggcgt gtgctgtggc
3661 aggttcacag gctgcagcct cagccaggag cacgtagagt cactctgctg gttgctgagc
3721 aagtgtaaag acctcagcca ggtggatctc tcagcaaacc tgctgggcga cagcggactc
3781 agatgccttc tggaatgtct gccgcaggtg cccatctccg gtttgcttga tctgagtcac
3841 aacagcattt ctcaggaaag tgccctgtac ctgctggaga cactgccctc ctgcccacgt
3901 gtccgggagg cctcagtgaa cctgggctct gagcagagct tccggattca cttctccaga
3961 gaggaccagg ctgggaagac actcaggcta agtgagtgca gcttccggcc agagcacgtg
4021 tccaggctgg ccaccggctt gagcaagtcc ctgcagctga cggagctcac gctgacccag
4081 tgctgcctgg gccagaagca gctggccatc ctcctgagct tggtggggcg acccgcaggg
4141 ctgttcagcc tcagggtgca ggagccgtgg gcggacagag ccagggttct ctccctgtta
4201 gaagtctgcg cccaggcctc aggcagtgtc actgaaatca gcatctccga gacccagcag
4261 cagctctgtg tccagctgga atttcctcgc caggaagaga atccagaagc tgtggcactc
4321 aggttggctc actgtgacct tggagcccac cacagccttc ttgtcgggca gctgatggag
4381 acatgtgcca ggctgcagca gctcagcttg tctcaggtta acctctgtga ggacgatgat
4441 gccagttccc tgctgctgca gagcctcctg ctgtccctct ctgagctgaa gacatttcgg
4501 ctgacctcca gctgtgtgag caccgagggc ctcgcccacc tggcatctgg tctgggccac
4561 tgccaccact tggaggagct ggacttgtct aacaatcaat ttgatgagga gggcaccaag
4621 gcgctgatga gggcccttga ggggaaatgg atgctaaaga ggctggacct cagtcacctt
4681 ctgctgaaca gctccacctt ggccttgctt actcacagac taagccagat gacctgcctg
4741 cagagcctca gactgaacag gaacagtatc ggtgatgtcg gttgctgcca cctttctgag
4801 gctctcaggg ctgccaccag cctagaggag ctggacttga gccacaacca gattggagac
4861 gctggtgtcc agcacttagc taccatcctg cctgggctgc cagagctcag gaagatagac
4921 ctctcaggga atagcatcag ctcagccggg ggagtgcagt tggcagagtc tctcgttctt
4981 tgcaggcgcc tggaggagtt gatgcttggc tgcaatgccc tgggggatcc cacagccctg
5041 gggctggctc aggagctgcc ccagcacctg agggtcctac acctaccatt cagccatctg
5101 ggcccaggtg gggccctgag cctggcccag gccctggatg gatcccccca tttggaagag
5161 atcagcttgg cggaaaacaa cctggctgga ggggtcctgc gtttctgtat ggagctcccg
5221 ctgctcagac agatagacct ggtttcctgt aagattgaca accagactgc caagctcctc
5281 acctccagct tcacgagctg ccctgccctg gaagtaatct tgctgtcctg gaatctcctc
5341 ggggatgagg cagctgccga gctggcccag gtgctgccga agatgggccg gctgaagaga
5401 gtggacctgg agaagaatca gatcacagct ttgggggcct ggctcctggc tgaaggactg
5461 gcccaggggt ctagcatcca agtcatccgc ctctggaata accccattcc ctgcgacatg
5521 gcccagcacc tgaagagcca ggagcccagg ctggactttg ccttctttga caaccagccc
5581 caggcccctt ggggtacttg a
//