LOCUS AF368063 3423 bp mRNA linear HUM 01-APR-2002 DEFINITION Homo sapiens putative RNA-binding motif protein 15 short form plus alternative exon (RBM15) mRNA, complete cds, alternatively spliced. ACCESSION AF368063 VERSION AF368063.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3423) AUTHORS Ma,Z., Morris,S.W., Valentine,V., Li,M., Herbrick,J.-A., Cui,X., Bouman,D., Li,Y., Mehta,P.K., Nizetic,D., Kaneko,Y., Chan,G.C.F., Chan,L.C., Squire,J., Scherer,S.W. and Hitzler,J.K. TITLE Fusion of two novel genes, RBM15 and MKL1, in the t(1;22)(p13;q13) of acute megakaryoblastic leukemia JOURNAL Nat. Genet. 28 (3), 220-221 (2001) PUBMED 11431691 REFERENCE 2 (bases 1 to 3423) AUTHORS Ma,Z., Morris,S.W., Valentine,V., Li,M., Herbrick,J.-A., Cui,X., Bouman,D., Li,Y., Mehta,P., Kaneko,Y., Chan,G.C.F., Chan,L.C., Squire,J., Scherer,S.W. and Hitzler,J.K. TITLE Direct Submission JOURNAL Submitted (05-APR-2001) Pathology, St. Jude Children's Research Hospital, 332 North Lauderdale St., Memphis, TN 38105, USA FEATURES Location/Qualifiers source 1..3423 /db_xref="H-InvDB:HIT000078505" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="1" /map="1p13" gene 1..3423 /gene="RBM15" /note="target gene of the t(1;22)(p13;q13) in acute; megakaryoblastic leukemias in infants and young children" CDS 84..3017 /gene="RBM15" /note="RBM15s+ae; alternatively spliced" /codon_start=1 /product="putative RNA-binding motif protein 15 short form plus alternative exon" /protein_id="AAK54723.1" /translation="MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPAT MKGKERSPVKAKRSRGGEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLLLDK SSSRGGSREYDTGGGSSSSRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSA PGGGDGAEYKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVA FVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGAS VGGHRHPPGGGGGQRSLSPGGAALGYRDYRLQQLALGRLPPPPPPPLPRDLERERDYP FYERVRPAYSLEPRVGAGAGAAPFREVDEISPEDDQRANRTLFLGNLDITVTESDLRR AFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLAMSGKIIIRNPIKIGYGK ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAHAAWT HMRGFPLGGPDRRLRVDFADTEHRYQQQYLQPLPLTHYELVTDAFGHRAPDPLRGARD RTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLDSLDRRRDGWSLD RDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESDRPRKRHCAPSPDRSPELSSSRD RYNSDNDRSSRLLLERPSPIRDGRGSLEKSQGDKRDRKNSASAERDRKHRTTAPTEGK SPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASPKLCLAWQGMLLLKNSN FPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKLDEVTRRIKVAGPNG YAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAGVISLPVGGNKDK ENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRGFGFQIGVRYENKKRENL ALTLL" misc_recomb 2946..2947 /gene="RBM15" /note="junction of RBM15 and MKL1 in fusion mRNA transcribed from translocation t(1;22)(p13;q13)" BASE COUNT 810 a 861 c 994 g 758 t ORIGIN 1 ggcgccttcc tggagcgcgg ggagatgtaa agatagacaa ataattttcc caatgagact 61 gtagaagaga gagcaattgg ccaatgagga ctgcggggcg ggaccctgtg ccgcggcgga 121 gtccaagatg gcggcgtgcg gttccgctgt gtgaaacgag cgcggggcgg cgggttactc 181 agctccgcgg agacgacctc cgacgacccg caacaatgaa gggaaaagag cgctcgccag 241 tgaaggccaa acgctcccgt ggtggtgagg actcgacttc ccgcggtgag cggagcaaga 301 agttaggggg ctctggtggc agcaatggga gcagcagcgg aaagaccgat agcggcggtg 361 ggtcgcggcg gagtctcctc ctggacaagt ccagcagtcg aggtggcagc cgcgagtatg 421 ataccggtgg gggcagctcc agtagccgct tgcatagtta tagctccccg agcaccaaaa 481 attcttcggg cgggggcgag tcgcgcagca gctcccgggg tggaggcggg gagtcacgtt 541 cctctggggc cgcctcctca gctcccggcg gcggggacgg cgcggaatac aagactctga 601 agataagcga gttggggtcc cagcttagtg acgaagcggt ggaggacggc ctgtttcatg 661 agttcaaacg cttcggtgat gtaagtgtga aaatcagtca tctgtcgggt tctggcagcg 721 gggatgagcg ggtagccttt gtgaacttcc ggcggccaga ggacgcgcgg gcggccaagc 781 atgccagagg ccgcctggtg ctctatgacc ggcctctgaa gatagaagct gtgtatgtga 841 gccggcgccg cagccgctcc cctttagaca aagatactta tcctccatca gccagtgtgg 901 tcggggcctc tgtaggtggt caccggcacc cccctggagg tggtggaggc cagagatcac 961 tttcccctgg tggcgctgct ttgggataca gagactaccg gctgcagcag ttggctcttg 1021 gccgcctgcc ccctccacct ccgccaccat tgcctcgaga cctggagaga gaaagagact 1081 acccgttcta tgagagagtg cgccctgcat acagtcttga gccaagggtg ggagctggag 1141 caggtgctgc tcctttcaga gaagtggatg agatttcacc cgaggatgat cagcgagcta 1201 accggacgct cttcttgggc aacctagaca tcactgtaac ggagagtgat ttaagaaggg 1261 cgtttgatcg ctttggagtc atcacagaag tagatatcaa gaggccttct cgcggccaga 1321 ctagtactta cggctttctc aaatttgaga acttagatat gtctcaccgg gccaaattag 1381 caatgtctgg caaaattata attcggaatc ctatcaaaat tggttatggt aaagctacac 1441 ccaccacccg cctctgggtg ggaggcctgg gaccttgggt tcctcttgct gccctggcac 1501 gagaatttga tcgatttggc accatacgca ccatagacta ccgaaaaggt gatagttggg 1561 catatatcca gtatgaaagc ctggatgcag cgcatgctgc ctggacccat atgcggggct 1621 tcccacttgg tggcccagat cgacgcctta gagtagactt tgccgacacc gaacatcgtt 1681 accagcagca gtatctgcag cctctgccct tgactcatta tgagctggtg acagatgctt 1741 ttggacatcg ggcaccagac cctttgaggg gtgctcggga taggacacca cccttactat 1801 acagagatcg tgatagggac ctttatcctg actctgattg ggtgccaccc ccacccccag 1861 tccgagaacg cagcactcgg actgcagcta cttctgtgcc tgcttatgag ccactggata 1921 gcctagatcg caggcgggat ggttggtcct tggaccggga cagaggtgat cgagatctgc 1981 ccagcagcag agaccagcct aggaagcgaa ggctgcctga ggagagtgga ggacgtcatc 2041 tggataggtc tcctgagagt gaccgcccac gaaaacgtca ctgcgctcct tctcctgacc 2101 gcagtccaga attgagcagt agccgggatc gttacaacag cgacaatgat cgatcttccc 2161 gtcttctctt ggaaaggccc tctccaatca gagacggacg aggtagtttg gagaagagcc 2221 agggtgacaa gcgagaccgt aaaaactctg catcagctga acgagatagg aagcaccgga 2281 caactgctcc cactgaggga aaaagccctc tgaaaaaaga agaccgctct gatgggagtg 2341 cacctagcac cagcactgct tcctccaagc tgaagtcccc gtcccagaaa caggatgggg 2401 ggacagcccc tgtggcatca gcctctccca aactctgttt ggcctggcag ggcatgcttc 2461 tactgaagaa cagcaacttt ccttccaaca tgcatctgtt gcagggtgac ctccaagtgg 2521 ctagtagtct tcttgtggag ggttcaactg gaggcaaagt ggcccagctc aagatcactc 2581 agcgtctccg tttggaccag cccaagttgg atgaagtaac tcgacgcatc aaagtagcag 2641 ggcccaatgg ttatgccatt cttttggctg tgcctggaag ttctgacagc cggtcctcct 2701 cttcctcagc tgcatcagac actgccactt ctactcagag gccacttagg aaccttgtgt 2761 cctatttaaa gcaaaagcag gcagccgggg tgatcagcct ccctgtgggg ggcaacaaag 2821 acaaggaaaa caccggggtc cttcatgcct tcccaccttg tgagttctcc cagcagttcc 2881 tggattcccc tgccaaggca ctggccaaat ctgaagaaga ttacctggtc atgatcattg 2941 tccgtgggtt tggttttcag ataggagtta ggtatgagaa caagaagaga gaaaacttgg 3001 cgctgaccct gttatagtgg ttatagtggt gtccctaaag ggaggaaatg atttcagcaa 3061 aactggttga acagcggatg aagatatgga attcaaagct ctaatggacc tttttgaaga 3121 gaagttgtgg cttatgtgga gtttacatgg gcctctgatg gaagaaagct aatctgttta 3181 gtatttgtgc attttactaa aatggcagct taaagttgtg tatctgctat tgtgatgcca 3241 atgccggtgt tttaagtgga aaaaaaatga cctctttgat ttgtgctgtg tacacaagat 3301 ttctggaaaa gtaaagaaaa acccttttta tggctcacac agcttaagag tagctgtctc 3361 tcaaacgtgc gctcacagtt gagctgcttt tgttttattc taaataaatt gtttcttttg 3421 agg //