LOCUS AF352733 2394 bp mRNA linear HUM 05-APR-2001
DEFINITION Homo sapiens glycine type 2 transporter variant SC6 mRNA, complete
cds.
ACCESSION AF352733
VERSION AF352733.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2394)
AUTHORS Evans,J., Herdon,H., Cairns,W., O'Brien,E., Chapman,C., Terrett,J.
and Gloger,I.
TITLE Cloning, functional characterisation and population analysis of a
variant form of the human glycine type 2 transporter
JOURNAL FEBS Lett. 463 (3), 301-306 (1999)
PUBMED 10606742
REFERENCE 2 (bases 1 to 2394)
AUTHORS Chapman,C.G., Herdon,H. and Gloger,I.S.
TITLE Direct Submission
JOURNAL Submitted (23-FEB-2001) Genomics, GlaxoSmithKline, New Frontiers
Science Park, Third Avenue, Harlow, Essex CM19 5AW, UK
FEATURES Location/Qualifiers
source 1..2394
/db_xref="H-InvDB:HIT000078244"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="spinal cord"
CDS 1..2394
/note="GlyT-2 transporter"
/codon_start=1
/product="glycine type 2 transporter variant SC6"
/protein_id="AAK29670.1"
/translation="MDCSAPKEMNKLPANSPEAAAAQGHPDGPCAPRTSPEQELPAAA
APPPPRVPRSASTGAQTFQSADARACEAERPGVGSCKLSSPRAQAASAALRDLREAQG
AQASPPPGSSGPGNALHCKIPSLRGPEGDANVSVGKGTLERNNTPVVGWVNMSQSTVV
LGTDGITSVLPGSVATVATQEDERGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFP
YLAFQNGGGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAM
LIISVLIAIYYNVIICYTLFYLFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIS
DHPKIQIKNSTFCMTAYPNVTMVNFTSQANKTFVSGSEEYFKYFVLKISAGIEYPGEI
RWPLALCLFLAWVIVYASLAKGIKTSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGI
WYFITPKWEKLTNATVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCT
NSATSIFAGFVIFSVIGFMANERKVNIENVADQGPGIAFVVYPEALTRLPLSPFWAII
FFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCCICFFIMGFPMITQG
GIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIFWKVCWA
FVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLMLACSVIWIPIMFVIKMHLA
PGRFIERLKLACSPQPDWGPFLAQHRGERYKNMIDPLGTSSLGLKLPVKDLELGTQC"
BASE COUNT 508 a 665 c 629 g 592 t
ORIGIN
1 atggattgca gtgctcccaa ggaaatgaat aaactgccag ccaacagccc ggaggcggcg
61 gcggcgcagg gccacccgga tggcccatgc gctcccagga cgagcccgga gcaggagctt
121 cccgcggccg ccgccccgcc gccgccacgt gtgcccaggt ccgcttccac cggcgcccaa
181 actttccagt cagcggacgc gcgagcctgc gaggctgagc ggccaggagt ggggtcttgc
241 aaactcagta gcccgcgggc gcaggcggcc tctgcagctc tgcgggactt gagagaggcg
301 caaggcgcgc aggcctcgcc ccctcccggg agctccgggc ccggcaacgc gctgcactgt
361 aagatccctt ctctgcgagg cccggagggg gatgcgaacg tgagtgtggg caagggcacc
421 ctggagcgga acaatacccc tgttgtgggc tgggtgaaca tgagccagag caccgtggtg
481 ctgggcacgg atggaatcac gtccgtgctc ccgggcagcg tggccaccgt tgccacccag
541 gaggacgagc gaggggatga gaataaggcc cgagggaact ggtccagcaa actggacttc
601 atcctgtcca tggtggggta cgcagtgggg ctgggcaatg tctggaggtt tccctacctg
661 gccttccaga acgggggagg tgctttcctc atcccttacc tgatgatgct ggctctggct
721 ggattaccca tcttcttctt ggaggtgtcg ctgggccagt ttgccagcca gggaccagtg
781 tctgtgtgga aggccatccc agctctacaa ggctgtggca tcgcgatgct gatcatctct
841 gtcctaatag ccatatacta caatgtgatt atttgctata cacttttcta cctgtttgcc
901 tcctttgtgt ctgtactacc ctggggctcc tgcaacaacc cttggaatac gccagaatgc
961 aaagataaaa ccaaactttt attagattcc tgtgttatca gtgaccatcc caaaatacag
1021 atcaagaact cgactttctg catgaccgct tatcccaacg tgacaatggt taatttcacc
1081 agccaggcca ataagacatt tgtcagtgga agtgaagagt acttcaagta ctttgtgctg
1141 aagatttctg cagggattga atatcctggc gagatcaggt ggccactagc tctctgcctc
1201 ttcctggctt gggtcattgt gtatgcatcg ttggctaaag gaatcaagac ttcaggaaaa
1261 gtggtgtact tcacggccac gttcccgtat gtcgtactcg tgatcctcct catccgagga
1321 gtcaccctgc ctggagctgg agctgggatc tggtacttca tcacacccaa gtgggagaaa
1381 ctcacgaatg ccacggtgtg gaaagatgct gccactcaga ttttcttctc tttatctgct
1441 gcatggggag gcctgatcac tctctcttct tacaacaaat tccacaacaa ctgctacagg
1501 gacactctaa ttgtcacctg caccaacagt gccacaagca tctttgccgg cttcgtcatc
1561 ttctccgtta tcggcttcat ggccaatgaa cgcaaagtca acattgagaa tgtggcagac
1621 caagggccag gcattgcatt tgtggtttac ccggaagcct taaccaggct gcctctctct
1681 ccgttctggg ccatcatctt tttcctgatg ctcctcactc ttggacttga cactatgttt
1741 gccaccatcg agaccatagt gacctccatc tcagacgagt ttcccaagta cctacgcaca
1801 cacaagccag tgtttactct gggctgctgc atttgtttct tcatcatggg ttttccaatg
1861 atcactcagg gtggaattta catgtttcag cttgtggaca cctatgctgc ctcctatgcc
1921 cttgtcatca ttgccatttt tgagctcgtg gggatctctt atgtgtatgg cttgcaaaga
1981 ttctgtgaag atatagagat gatgattgga ttccagccta acatcttctg gaaagtctgc
2041 tgggcatttg taaccccaac cattttaacc tttatccttt gcttcagctt ttaccagtgg
2101 gagcccatga cctatggctc ttaccgctat cctaactggt ccatggtgct cggatggcta
2161 atgctcgcct gttccgtcat ctggatccca attatgtttg tgataaaaat gcatctggcc
2221 cctggaagat ttattgagag gctgaagttg gcgtgctcgc cacagccgga ctggggccca
2281 ttcttagctc aacaccgcgg ggagcgttac aagaacatga tcgacccctt gggaacctct
2341 tccttgggac tcaaactgcc agtgaaggat ttggaactgg gcactcagtg ctag
//