LOCUS AF349313 2516 bp mRNA linear HUM 28-AUG-2002
DEFINITION Homo sapiens nuclear zinc finger protein RAP80 (RAP80) mRNA,
complete cds.
ACCESSION AF349313
VERSION AF349313.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2516)
AUTHORS Yan,Z., Kim,Y.S. and Jetten,A.M.
TITLE RAP80, a novel nuclear protein that interacts with the
retinoid-related testis-associated receptor
JOURNAL J. Biol. Chem. 277 (35), 32379-32388 (2002)
PUBMED 12080054
REFERENCE 2 (bases 1 to 2516)
AUTHORS Zhang,L.-X., Kim,Y.-S., Yan,Z. and Jetten,A.M.
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2001) Cell Biology, NIEHS, NIH, 111 T.W.
Alexander Drive, Research Triangle Park, NC 27709, USA
FEATURES Location/Qualifiers
source 1..2516
/db_xref="H-InvDB:HIT000078183"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q35"
gene 1..2516
/gene="RAP80"
CDS 110..2269
/gene="RAP80"
/note="RIP110"
/codon_start=1
/product="nuclear zinc finger protein RAP80"
/protein_id="AAK61871.1"
/translation="MPRRKKKVKEVSESRNLEKKDVETTSSVSVKRKRRLEDAFIVIS
DSDGEEPKEENGLQKTKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQ
EEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSGLTEGIWQLV
PPSLFKGSHISQGNEAEEREEPWDHTEKTEEEPVSGSSGSWDQSSQPVFENVNVKSFD
RCTGHSAEHTQCGKPQESTGRGSAFLKAVQGSGDTSRHCLPTLADAKGLQDTGGTVNY
FWGIPFCPDGVDPNQYTKVILCQLEVYQKSLKMAQRQLLNKKGFGEPVLPRPPSLIQN
ECGQGEQASEKNGCISEDMGDEDKEERQESRASDWHSKTKDFQESSIKSLKEKLLLEE
EPTTSHGQSSQGIVEETSEEGNSVPASQSVAALTSKRSLVLMPESSAEEITVCPETQL
SSSETFDLEREVSPGSRDILDGVRIIMADKEVGNKEDAEKEVAISTFSSSNQVSCPLC
DQCFPPTKIGRHAMYCNGLMEEDTVLTRRQKEAKTKSDSGTAAQTSLDIDKNEKCYLC
KSLVPFREYQCHVDSCLQLAKADQGDGPEGSGRACSTVEGKWQQRLKNPKEKGHSEGR
LLSFLEQSEHKTSDADIKSSETGAFRVPSPGMEEAGCSREMQSSFTRRDLNESPVKSF
VSISEATDCLVDFKKQVTVQPGSRTRTKAGRGRRRKF"
misc_feature 116..130
/gene="RAP80"
/note="Region: nuclear localization signal"
misc_feature 200..214
/gene="RAP80"
/note="Region: nuclear localization signal"
misc_feature 1613..1672
/gene="RAP80"
/note="Region: C2HC zinc finger"
misc_feature 1781..1840
/gene="RAP80"
/note="Region: C2HC zinc finger"
BASE COUNT 761 a 541 c 662 g 552 t
ORIGIN
1 cggacgcgcg cgcccctccc cctccccccg cgctcccaac gtgtggcggc tcgcgacccc
61 cggcaacccg gagaaggtct acagagcggc ctgcgccacg aacaaaagga tgccacggag
121 aaagaaaaaa gttaaagaag tctccgaatc tcggaacctg gagaagaagg atgtggaaac
181 taccagttct gtcagtgtga agaggaagcg tagacttgag gatgcattca ttgtgatatc
241 cgatagtgat ggagaggaac caaaggagga aaatgggttg cagaaaacga agacaaaaca
301 gtcgaataga gcaaagtgtt tggccaaaag aaaaatcgca cagatgacag aagaagaaca
361 gtttgctctg gctctcaaaa tgagtgagca ggaagctagg gaggtgaaca gccaggagga
421 ggaagaagag gagctcttga ggaaagccat tgctgaaagc ctgaatagtt gccggccttc
481 tgatgcttcc gctaccagat ctcgacctct ggccactgga ccgtcttccc agtcccatca
541 agagaaaacc acagactctg ggctcactga aggcatatgg cagctggtac ctccatcact
601 gtttaaaggc tcacatatca gtcagggaaa cgaggctgag gaaagagagg agccttggga
661 ccacactgaa aaaactgaag aggagccggt ctctggcagc tcaggaagct gggaccagtc
721 aagccagcca gtgtttgaga atgtgaacgt taaatctttt gacagatgta ctggccactc
781 ggctgagcac acacagtgtg ggaagccaca ggaaagtact gggaggggtt ctgcctttct
841 caaagctgtc cagggtagcg gggacacatc taggcactgt ctacctaccc tagcagatgc
901 caaaggtctc caggacactg ggggcactgt gaactatttc tggggtattc cattctgccc
961 tgatggagta gaccctaacc agtataccaa ggtcattctc tgccagttgg aggtttatca
1021 aaagagcctg aaaatggctc agaggcagct ccttaataaa aaaggttttg gggaaccagt
1081 gttacctaga cctccttctc tgatccagaa tgaatgtggc caaggagagc aggctagtga
1141 gaaaaatgga tgcatctcag aagatatggg agatgaagac aaagaggaga ggcaggagtc
1201 tagggcatct gactggcact caaaaaccaa ggatttccag gaaagctcaa ttaaaagctt
1261 gaaagagaaa cttttgttgg aggaagaacc aacaaccagt catggtcagt cttcccaagg
1321 gattgttgaa gaaacttctg aagagggaaa ctctgtacct gcttcacaaa gtgttgctgc
1381 tttgaccagt aagagaagct tagtccttat gccagagagt tctgcagaag aaatcactgt
1441 ttgtcctgag acccagctaa gttcctctga aacttttgac cttgaaagag aagtctctcc
1501 aggtagcaga gatatcttgg atggagtcag aataataatg gcagataagg aggttggtaa
1561 caaggaagat gctgagaagg aagtagctat ttctaccttc tcatccagta accaggtatc
1621 ctgcccgcta tgtgaccaat gctttccacc tacaaagatt ggacgacatg ccatgtactg
1681 caatggtctg atggaggaag atacagtatt gactcggaga caaaaagagg ccaagaccaa
1741 gagtgacagt gggacagctg cccagacttc tctagacatt gacaagaatg agaagtgtta
1801 cctctgtaaa tccctggtcc catttagaga gtatcagtgt catgtggact cctgtctcca
1861 gcttgcaaag gctgaccaag gagatggacc tgaagggagt ggaagagcat gttcaactgt
1921 ggaggggaag tggcagcaga ggctgaagaa cccaaaggaa aaaggccaca gtgaaggccg
1981 actccttagt ttcttggaac agtctgagca caagacttca gatgcagaca tcaagtcttc
2041 agaaacagga gccttcaggg tgccttcacc agggatggaa gaggcaggct gcagcagaga
2101 gatgcagagt tctttcacac gtcgtgactt aaatgaatct cccgtcaagt cttttgtttc
2161 catttcagaa gccacagatt gcttagtgga ctttaaaaag caagttactg tccagccagg
2221 tagtcggaca cggaccaaag ctggcagagg aagaaggaga aaattctgaa tttctagggt
2281 ccaaaagttg acaaaaccat tagtaggagg ggtgggccat gttctataag ccatagtggt
2341 ccctagttca ttgttgagca agtttttagc cctgcagttt tcaccaccag caccaccagc
2401 acctacccag cattctggtt tttatgtttt ttatgatcta tgcagacaac tgtgtattct
2461 gttttataac agtttgtttg aatttactta cagttaaaaa atttaaatat aaaaaa
//