LOCUS AF336798 3888 bp mRNA linear HUM 01-FEB-2005
DEFINITION Homo sapiens HERC6 mRNA, complete cds.
ACCESSION AF336798
VERSION AF336798.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3888)
AUTHORS Hochrainer,K., Mayer,H., Baranyi,U., Binder,B., Lipp,J. and
Kroismayr,R.
TITLE The human HERC family of ubiquitin ligases: novel members, genomic
organization, expression profiling, and evolutionary aspects
JOURNAL Genomics 85 (2), 153-164 (2005)
PUBMED 15676274
REFERENCE 2 (bases 1 to 3888)
AUTHORS Kroismayr,R., Binder,B.R. and Lipp,J.
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) Department of Vascular Biology and
Thrombosis Research, University of Vienna, Brunnerstr. 59, Vienna
1235, Austria
FEATURES Location/Qualifiers
source 1..3888
/db_xref="H-InvDB:HIT000242883"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="4"
CDS 184..3252
/function="potential ubiquitin ligase"
/codon_start=1
/product="HERC6"
/protein_id="AAQ14893.1"
/translation="MYFCWGADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRV
LSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAG
SEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL
GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR
NVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK
RGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDI
SCLISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIA
VKRRSTEHEMAKSEIRMIFSSPACLTASFLKKRGTGETTSIDVDLEMARDTFKKLTKK
EWISSMITTCLEDDLLRALPCHSPHQEALSVFLLLPECPVMHDSKNWKNLVVPFAKAV
CEMSKQSLQVLKKCWAFLQESSLNPLIQMLKAAIISQLLHQTKTEQDHCNVKALLGMM
KELHKVNKANCRLPENTFNINELSNLLNFYIDRGRQLFRDNHLIPAETPSPVIFSDFP
FIFNSLSKIKLLQADSHIKMQMSEKKAYMLMHETILQKKDEFPPSPRFILRVRRSRLV
KDALRQLSQAEATDFCKVLVVEFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPE
MGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKPSLEDLK
ELSPRLGKSLQEVLDDAADDIGDALCIRFSIHWDQNDVDLIPNGISIPVDQTNKRDYV
SKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIGNTDYDWKQFEQN
SKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHARGIQKMEIVFRCPE
TFSERDHPTSITCHNILSLPKYSTMERMEEALQVAINNNRGFVSPMLTQS"
BASE COUNT 1116 a 857 c 929 g 986 t
ORIGIN
1 agcacttgaa gttcaggcag cgagagttga catggggcca gggctgcgcc cctggggcgg
61 gttgaagaca gggtgagtct cttgatattc aggaaatcat cgcgcaccca gtcaccagcg
121 ttcgggagcc tgtcgcagcg ggaccgacgg aatccggagc aggcgacagg gcgcagaagc
181 gggatgtact tctgttgggg cgccgactcc agggagctgc agcgccggag gacggcgggc
241 agccccgggg ctgagctact gcaggcggcc agcggggagc gccactctct gctgctgctg
301 accaaccaca gggtcctctc gtgcggagac aacagcaggg gtcagctggg ccgcaggggc
361 gcgcagcgcg gggagctgcc agaaccaatt caggcattgg aaaccctaat tgttgatctc
421 gtgagctgcg ggaaggagca ctccctggct gtgtgccaca aaggaagggt cttcgcatgg
481 ggagctggtt ctgaagggca gctggggatt ggagaattca aggaaataag tttcacacct
541 aagaaaataa tgactctgaa tgatataaaa ataatacaag tttcctgtgg acactaccac
601 tccctggcat tatcaaaaga tagccaagtg ttttcgtggg gaaagaacag ccatgggcag
661 ctgggcttgg ggaaggagtt cccctcccaa gccagcccgc agagggtgag gtccctggag
721 gggatcccac tggctcaggt ggctgccgga ggggctcaca gctttgccct gtctctctgt
781 gggacttcgt ttggctgggg aagtaacagt gccgggcagc tggccctcag tgggcgtaat
841 gtcccagtgc aaagcaacaa gcctctctca gtcggtgcac tgaagaatct aggtgtggtt
901 tatatcagct gtggtgatgc acacactgcg gtgcttaccc aggacgggaa agtgttcaca
961 tttggagaca atcgctctgg acagctggga tacagcccca ctcctgagaa gagaggtcca
1021 caacttgtgg aaagaattga tggcctagtt tcgcagatag attgtggaag ttatcacacc
1081 ctggcatatg tgcacaccac tggtcaggtg gtatcttttg gtcatggacc aagtgacaca
1141 agcaagccaa ctcatccgga ggccctgaca gagaactttg acattagctg cctgatttct
1201 gctgaagact tcgtggatgt tcaagtcaaa cacatttttg ctggaacata tgccaacttt
1261 gtgacaactc atcaggatac tagttccaca cgtgctcccg ggaaaaccct gccagaaata
1321 agccgaatta gccagtccat ggcagaaaaa tggatagcag tgaaaagaag aagtactgaa
1381 catgaaatgg ctaaaagtga aattagaatg atattttcat ctcctgcttg tctgactgca
1441 agttttttaa agaaaagagg aactggagaa acgacttcca ttgatgtgga cttagaaatg
1501 gcaagagata ccttcaagaa gttaacaaaa aaggaatgga tttcttccat gataactacg
1561 tgtctcgagg atgatctgct cagagctctt ccatgccatt ctccacacca agaagcttta
1621 tcagttttcc tcctgctccc agaatgtcct gtgatgcatg attctaagaa ctggaagaac
1681 ctggtggttc catttgcaaa ggctgtgtgt gaaatgagta aacaatcttt gcaagtccta
1741 aagaagtgtt gggcattttt gcaagaatct tctctgaatc cgctgatcca gatgcttaaa
1801 gcagccatca tctctcagct gcttcatcag actaaaaccg aacaggatca ctgtaatgtt
1861 aaagctcttt taggaatgat gaaagaactg cataaggtaa acaaagctaa ctgtcgacta
1921 ccagaaaata ctttcaacat aaatgaactc tccaacttat taaactttta tatagataga
1981 ggaagacagc tctttcggga taaccacctg atacctgcag aaacccccag tcctgttatt
2041 ttcagtgatt ttccatttat ctttaattcg ctatccaaaa ttaaattatt gcaagctgat
2101 tcacatataa agatgcagat gtcagaaaag aaagcataca tgcttatgca tgaaacaatt
2161 ctgcaaaaaa aggatgaatt tcctccatca cccagattta tacttagagt cagacgaagt
2221 cgcctggtta aagatgctct gcgtcaatta agtcaagctg aagctactga cttctgcaaa
2281 gtattagtgg ttgaatttat taatgaaatt tgtcctgagt ctggaggggt tagttcagag
2341 ttcttccact gtatgtttga agagatgacc aagccagaat atggaatgtt catgtatcct
2401 gaaatgggtt cctgcatgtg gtttcctgcc aagcctaaac ctgagaagaa aagatatttc
2461 ctctttggaa tgctgtgtgg actctcctta ttcaatttaa atgttgctaa ccttcctttc
2521 ccactggctc tgtataaaaa acttctggac caaaagccat cattggaaga tttaaaagaa
2581 ctcagtcctc ggttggggaa gagtttgcaa gaagttctag atgatgctgc tgatgacatt
2641 ggagatgcgc tctgcatacg cttttctata cactgggacc aaaatgatgt tgacttaatt
2701 ccaaatggga tctccatacc tgtggaccaa accaacaaga gagactatgt ttctaagtat
2761 attgattaca ttttcaacgt ctctgtaaaa gcagtttatg aggaatttca gagaggattt
2821 tatagagtct gtgagaagga gatacttaga catttctacc ctgaagaact aatgacagca
2881 atcattggaa atactgatta tgactggaaa cagtttgaac agaattcaaa gtatgagcaa
2941 ggataccaaa aatcacatcc tactatacag ttgttttgga aggctttcca caaactaacc
3001 ttggatgaaa agaaaaaatt cctctttttc cttacaggac gtgataggct gcatgcaaga
3061 ggcatacaga aaatggaaat agtatttcgc tgtcctgaaa ctttcagtga aagagatcac
3121 ccaacatcaa taacttgtca taatattctc tccctcccta agtattctac aatggaaaga
3181 atggaggaag cacttcaagt agccatcaac aacaacagag gatttgtctc acccatgctc
3241 acacagtcat aatcacctct gagagactca gggtgggctt tctcacactt ggatccttct
3301 gttcttcctt acacctaaat aatacaagag attaatgaat agtggttaga agtagttgag
3361 ggagagattg ggggaatggg gagatgatga tgatggtcaa agggtgcaaa atctcacaca
3421 agactgaggc aggagaatag ggtacagaga tagggatcta aggatgactt ggacacactc
3481 cctggcactg aagagtctga acactggcct gtgattggtc cattccagga ccttcatttg
3541 cataaggtat caaaccacat cagcctctga ttggccatgg gccagacctg cactctggcc
3601 aatgattggt tcattccagg acattcattt gcataaggag tcaaaccaca ccagtcttgg
3661 attggctgtg agccaattca cctcagtctc taattggctg tgagtcagtc tttcatttac
3721 atagggtgta accatcaaga aacctctaca gggtacttaa gccccagaag attttgctac
3781 cagggctctt gagccacttg ctctagccca ctcccaccct gtggaatgta ctttcacttt
3841 tgctgcttca ctgccttgtg ctccaataaa tccactcctt caccaccc
//