LOCUS AF334812 4340 bp mRNA linear HUM 19-MAR-2001
DEFINITION Homo sapiens Rab11 interacting protein Rip11a mRNA, complete cds.
ACCESSION AF334812
VERSION AF334812.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4340)
AUTHORS Prekeris,R., Klumperman,J. and Scheller,R.H.
TITLE A Rab11/Rip11 protein complex regulates apical membrane trafficking
via recycling endosomes
JOURNAL Mol. Cell 6 (6), 1437-1448 (2000)
PUBMED 11163216
REFERENCE 2 (bases 1 to 4340)
AUTHORS Prekeris,R. and Scheller,R.H.
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2001) Molecular and Cellular Physiology, Stanford
University School of Medicine, Beckman Center B151, Stanford, CA
94305, USA
FEATURES Location/Qualifiers
source 1..4340
/db_xref="H-InvDB:HIT000077807"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="2"
CDS 241..2202
/function="involved in trafficking from apical recycling
endosomes (ARE) to apical plasma membrane"
/note="enriched in polarized epithelial cells"
/codon_start=1
/product="Rab11 interacting protein Rip11a"
/protein_id="AAK20892.1"
/translation="MALVRGAEPAAGPSRWLPTHVQVTVLRARGLRGKSSGAGSTSDA
YTVIQVGREKYSTSVVEKTHGCPEWREECSFELPPGALDGLLRAQEADAGPAPWAASS
AAACELVLTTMHRSLIGVDKFLGQATVALDEVFGAGRAQHTQWYKLHSKPGKKEKERG
EIEVTIQFTRNNLSASMFDLSMKDKPRSPFSKIRDKMKGKKKYDLESASAILPSSAIE
DPDLGSLGKMGKAKGFFLRNKLRKSSLTQSNTSLGSDSTLSSASGSLAYQGPGAELLT
RSPSRSSWLSTEGGRDSAQSPKLFTHKRTYSDEANQMRVAPPRALLDLQGHLDAASRS
SLCVNGSHIYNEEPQGPVRHRSSISGSLPSSGSLQAVSSRFSEEGPRSTDDTWPRGSR
SNSSSEAVLGQEELSAQAKVLAPGASHPGEEEGARLPEGKPVQVATPIVASSEAVAEK
EGARKEERKPRMGLFHHHHQGLSRSELGRRSSLGEKGGPILGASPHHSSSGEEKAKSS
WFGLREAKDPTQKPSPHPVKPLSAAPVEGSPDRKQSRSSLSIALSSGLEKLKTVTSGS
IQPVTQAPQAGQMVDTKRLKDSAVLDQSAKYYHLTHDELISLLLQRERELSQRDEHVQ
ELESYIDRLLVRIMETSPTLLQIPPGPPK"
misc_feature 280..612
/note="Region: C2 domains"
BASE COUNT 813 a 1315 c 1310 g 902 t
ORIGIN
1 ccggttgggg cggcgggcgc ggggcggggc agggggcggg gcgctgacgt cgcggcgcgg
61 cccgcggcca gcggcccggt gaggcgggga ggcggcggcc ggtcggcccg gcccagccca
121 gcccgcagct gcggcggcgc tcagagttgg ttcctgaccg ccttctgccg cggccgggtt
181 tgtcaccagg tcctggggtc tgcaccggct cggccagacc tcgccccccg cttctccgcc
241 atggccctgg tgcggggcgc ggagccggcg gcggggcctt cccgctggct gcccacgcac
301 gtccaggtga cggtgctgcg ggcccgcggg ctgcggggca agagctcggg agcgggcagc
361 accagcgacg cgtacacggt gatccaggtg ggccgcgaga agtacagtac gtcggtggtg
421 gagaagacgc acggctgtcc cgagtggcgt gaggagtgct ccttcgagct gccgccgggg
481 gccctggatg gcctgctgcg ggcgcaggag gccgacgcgg gcccggcgcc ctgggccgcg
541 agctccgccg ccgcctgcga gctggtgctc accaccatgc accgctcgct catcggcgtc
601 gacaagttcc tgggccaggc cacggtggcg ctggacgagg tcttcggcgc aggccgcgcc
661 cagcacacgc agtggtacaa gctgcactcc aagccaggca agaaggagaa ggaacgcggc
721 gagattgaag tcaccatcca gttcacgcgc aacaacctga gcgccagtat gtttgacctg
781 tccatgaagg acaagccaag gtctcccttc agcaagatca gggacaagat gaagggcaag
841 aagaagtatg atctggaatc tgcctctgcc atcctcccaa gcagcgccat agaggatcct
901 gacctgggca gcctgggcaa gatgggcaaa gccaaaggct tcttcctccg caacaagctg
961 cgcaagtcgt ccctgaccca gtccaacacc tcgctgggct cggacagcac cctgtcctca
1021 gccagcggga gcttggccta ccagggacct ggcgccgaac tcctcacccg ctcaccaagc
1081 cgtagcagct ggctgtccac tgaagggggc agggactctg cacagtcccc caagctgttc
1141 acccataaga ggacctacag cgatgaggcc aaccagatgc gagtggctcc tcctcgggcc
1201 cttctggacc ttcagggcca cctggatgct gcctcccgct cttcgctctg tgtcaatggg
1261 agccacattt acaatgagga gccccagggc cctgtgcggc accgcagctc catctcgggc
1321 tcgcttccat cctctggctc cttgcaagct gtctcttccc ggttctccga ggaggggcct
1381 cgttccacag atgacacctg gcccagaggc agtcgtagca acagcagctc agaggcagtg
1441 cttggacagg aggagctgag tgctcaggct aaagtcctgg cccctggggc cagccaccct
1501 ggagaggagg agggggcccg gctaccagag ggcaagccag tccaggttgc cacacccata
1561 gtggcctcct ctgaggctgt ggcagagaag gagggagccc ggaaggagga acgcaagccc
1621 cggatgggtc tcttccacca ccaccaccaa ggcctaagtc ggagcgagtt gggtcgccga
1681 agctctctgg gggaaaaggg gggtcccatc ctgggggcct ccccacatca ctcatccagt
1741 ggggaggaaa aggccaagag tagctggttt ggcttgagag aagccaagga cccgactcag
1801 aaacccagtc cccaccccgt gaagcccctc agtgccgccc ctgtggaggg cagccccgac
1861 aggaagcagt cccgctccag tctgagcata gccctgagca gtgggctgga gaagctcaaa
1921 acagtcacat ctgggagcat tcagcctgtg acccaggccc cccaggctgg ccagatggtg
1981 gacaccaaaa ggctgaagga ctcagctgtg ctggaccagt cggccaagta ctaccacctg
2041 acccacgatg agctcatcag cctgctcctg cagcgggagc gggagctgag ccagcgggac
2101 gagcatgtgc aggagctgga gagctacatc gaccggctgc tggtgcggat catggagacc
2161 tcacccacgc tgctgcagat ccccccgggc ccccccaaat agccttcctc accctacccc
2221 caggagggtt ggcatggacc tattgctgcc tgccctctct cctcctgaac tctctcatct
2281 gcagtggggc atcgtctgtc ttgccttgtc actccttgct cctctccctc ctgcctcaac
2341 tggggctgct ggaagggggc cctctggatt ccctttggag gcatcaggtt ctgtgcacaa
2401 cttgtgtgtc tttgggagcc ctgggtcttt cccacctgcc tgttttcata tccctcagct
2461 ttgggggccc cagggaattg gaactcttcc cccaagacag agcaggggtg aactgtagct
2521 tgatgcagta atctgggaca agactggttg ctagcacata ctttattatc ccccaaggat
2581 ggtcagccat ttcttcccac agccaaagcc ccatcccctt catttccctc cagtccctgg
2641 aggggcttct agtattactg ggacaatgac cacgctgcct gtttgtctgt gagttacggg
2701 caaccagcct cttcagcctc acacccattc ccctgagagc aagaagcctg tgtggtctgg
2761 gccagtctct gccatgtcct gagtctgctt cagtctggag ctgtttgtgg ggcgagtgcc
2821 atgtggacag tggtggatga tgtgtgtgct tcaggctgct ccctgacccc tctgaccttt
2881 ccacgagtgt cacatgggaa tgtgtggggc gcaggggcgg gtgcggagag agcacctttt
2941 tgcttttcga gctcttgacc acctccaatg tgtaggtccc tccaggctgg ggcttgggac
3001 tgcttatgat ttggggatca agcctccatg tctattcttg ttgcctgtcc agatgccaaa
3061 actctgtgtt gctgcagggt ttgaactttt ggaaaccaat taaaatgtgc ctttggtggg
3121 cggggtcaag agcccctgga tgtcgacctc tcccgctgtg tggcgtcccc ctcccacctg
3181 ttgaatacat agggatggct ctctcagggc cctgggaatg ggaatggaca gcactgctgt
3241 gggctgttcc cttcccctaa agttaatctc ttggtctggc caagttgctg ctccctcaac
3301 cttcctgctg tcttcccctc cctcaacccc aataggagga tcccaggata aacactgctg
3361 ggcaggcggg caggcaggcc tggggctgcc ctgctcactc tcattgtctg gcctcaggac
3421 ttagccatac tagaccagtc agcttgcctg gaagagggag gtcccactat gcctttggga
3481 gacacctata cttaggaaaa agcctttgtt gtcctcccat ccatccatta agctgctatc
3541 tcagcctgtc ccttctgccc caggggcttg cctggcttgg ctgcagtgca ctttgaaatg
3601 aagtatctgt cctttggccc agcccctggt ttgcttgtag aaaacatggt aggcttcccc
3661 aaggcatctg cagggaactt tggcagcttg gggcaccctg aattagcaaa aatggggggt
3721 gatgaggtgc tgaagaagga tacttaacag cttagtgagg aggcaagagc tcctctggga
3781 ccaccacttc ttcaggagag ggcctgtggg cttgcttttg gaaggcctca ggcagacacg
3841 tgccctctgg gtgatgtctg tctgctgcca ggatggagca gaggagcgcc acacatggag
3901 gaaagcccct gtaacgttac ctaccttaaa ctccactcat caaatctgag aaaagtatcc
3961 actggtcccc agggtttcag tcatgctttt gggggtcatt gggtattaga gaagtaagta
4021 tcttttctga gagaggggga gtcacccccc ctactgggga ttcctctggg ctttattcac
4081 tcccagccct ggccctgacc tttgtgggcc tccctaatgc ccagggcatg gatggcttca
4141 gaggagtttt tgaatcgaag cccagggtcc ttgttgatgt ttcttctccg agccacactt
4201 ggaggaaagt tgcaggtggg ttgggcaggg agcaggcatg gttctgcttt gctgtttgtc
4261 ttcctagtta aggctcttta taaagagctt cttcttcatg ttttaagcac tttatgaaga
4321 ataaaacatt catgtactgc
//