LOCUS AF334586 3109 bp mRNA linear HUM 06-FEB-2001
DEFINITION Homo sapiens NIR1 mRNA, complete cds.
ACCESSION AF334586
VERSION AF334586.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3109)
AUTHORS Lev,S., Hernandez,J., Martinez,R., Chen,A., Plowman,G. and
Schlessinger,J.
TITLE Identification of a novel family of targets of PYK2 related to
Drosophila retinal degeneration B (rdgB) protein
JOURNAL Mol. Cell. Biol. 19 (3), 2278-2288 (1999)
PUBMED 10022914
REFERENCE 2 (bases 1 to 3109)
AUTHORS Lev,S., Hernandez,J., Martinez,R., Plowman,G.D. and Schlessinger,J.
TITLE Direct Submission
JOURNAL Submitted (08-JAN-2001) Department of Neurobiology, Weizmann, 76100
Rehovot, Rehovot 76100, Israel
FEATURES Location/Qualifiers
source 1..3109
/db_xref="H-InvDB:HIT000077795"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 149..3073
/note="similar to Drosophila retinal degeneration B (rdgB)
protein"
/codon_start=1
/product="NIR1"
/protein_id="AAK01446.1"
/translation="MAKAGRAGGPPPGGGAPWHLRNVLSDSVESSDDEFFDAREEMAE
GKNAILIGMSQWNSNDLVEQIETMGKLDEHQGEGTAPCTSSILQEKQRELYRVSLRRQ
RFPAQGSIEIHEDSEEGCPQRSCKTHVLLLVLHGGNILDTGAGDPSCKAADIHTFSSV
LEKVTRAHFPAALGHILIKFVPCPAICSEAFSLVSHLNPYSHDEGCLSSSQDHVPLAA
LPLLAISSPQYQDAVATVIERANQVYREFLKSSDGIGFSGQVCLIGDCVGGLLAFDAI
CYSAGPSGDSPASSSRKGSISSTQDTPVAVEEDCSLASSKRLSKSNIDISSGLEDEEP
KRPLPRKQSDSSTYDCEAITQHHAFLSSIHSSVLKDESETPAAGGPQLPEVSLGRFDF
DVSDFFLFGSPLGLVLAMRRTVLPGLDGFQVRPACSQVYSFFHCADPSASRLEPLLEP
KFHLVPPVSVPRYQRFPLGDGQSLLLADALHTHSPLFLEGSSRDSPPLLDAPASPPQA
SRFQRPGRRMSEGSSHSESSESSDSMAPVGASRITAKWWGSKRIDYALYCPDVLTAFP
TVALPHLFHASYWESTDVVAFILRQVMRYESVNIKESARLDPAALSPANPREKWLRKR
TQVKLRNVTANHRANDVIAAEDGPQVLVGRFMYGPLDMVALTGEKVDILVMAEPSSGR
WVHLDTEITNSSGRITYNVPRPRRLGVGVYPVKMVVRGDQTCAMSYLTVLPRGMECVV
FSIDGSFAASVSIMGSDPKVRPGAVDVVRHWQDLGYMILYITGRPDMQKQRVVSWLSQ
HNFPQGMIFFSDGLVHDPLRQKAIFLRNLMQECFIKISAAYGSTKDISVYSVLGLPAS
QIFIVGRPTKKYQTQCQFLSEGYAAHLAVLEASHRSRPKKNNSRMILRKGSFGLHAQP
EFLRKRNHLRRTMSVQQPDPPAANPKPERAQSQPESDKDHERPLPALSWARGPPKFES
VP"
BASE COUNT 582 a 1010 c 982 g 535 t
ORIGIN
1 gcggcggcgg ctgcggtggc ggcagcgagg cgagcggggc gggggcgcgg gcgcggcgct
61 cggagtccgt tcggggccgg aggcggtcgg ggccgggccc gggaagcgcg aggagcgcgc
121 gtagccgccg gagcccgccg cccgggacat ggccaaggcg ggccgtgcag gtggtcctcc
181 cccgggcggc ggtgccccct ggcaccttcg aaatgtcctc agtgactctg tggagagctc
241 agatgatgaa ttctttgatg ccagagagga gatggctgaa gggaagaatg ccatcctcat
301 tgggatgagc cagtggaact ccaatgacct cgtggagcag atcgagacca tggggaaact
361 ggacgagcat caaggagaag ggaccgcgcc gtgcacatcc agcatcctcc aggagaagca
421 gcgagaactg taccgggttt ccttgagaag acagaggttc ccagcccagg gaagcatcga
481 gatccacgaa gacagcgagg aaggctgccc gcagcgctcc tgcaagacac atgtcctcct
541 gctggtcctg catgggggaa acatcctgga cacgggtgcc ggggacccgt cctgcaaggc
601 agccgacatc cacaccttca gctccgtgct ggagaaggtc acacgagccc atttccctgc
661 tgccctgggc cacatcctca tcaagttcgt cccctgtcct gccatctgct ctgaggcttt
721 ctcgcttgtc tctcacctga acccctacag ccacgatgag ggctgcctca gcagcagcca
781 ggaccacgtc cctctggccg cccttcccct gttggccatc tcctccccgc agtaccagga
841 tgctgtcgcc accgtcatcg agcgagccaa ccaggtctac agagagttcc tgaagtcctc
901 tgatgggatt ggcttcagtg ggcaggtgtg tctcatcggg gactgtgtgg ggggcctcct
961 ggccttcgat gccatctgct acagtgcggg gccctcaggg gacagccctg ccagcagcag
1021 ccggaagggg agcatcagca gcacccagga caccccagtc gcggtggagg aagattgcag
1081 cctggccagc agcaagcgtc tcagcaaaag caacattgac atctccagtg ggttggagga
1141 tgaggagccc aagaggccgt tgccgcggaa acagagcgac tcctccacct atgactgcga
1201 ggccatcacc cagcaccatg ccttcctctc aagcatccac tccagcgtgc taaaggatga
1261 gtctgagacc ccggcggctg gggggccgca gctccctgag gtcagcctgg gccgctttga
1321 cttcgatgtg tccgacttct tcctcttcgg ctcgccactg ggcctggtcc tggccatgcg
1381 gaggacggtg ctgcctgggc tggacggctt ccaggtgcgt cctgcctgca gccaggtcta
1441 cagcttcttc cattgcgcag acccctctgc ctcacggctc gagccactgc tggagcccaa
1501 gttccacctg gtgccgcctg tcagcgtgcc tcgctaccag aggttcccac tgggcgatgg
1561 gcagtccctc ctcctcgctg atgccctaca cacccacagc cccctcttcc tggagggcag
1621 ctcccgggac agcccgccac ttctggatgc ccctgcctcg ccccctcagg cctcgaggtt
1681 ccagcgccca ggacggagga tgagcgaggg gagctcccac agcgagagct cggagtcctc
1741 ggacagcatg gcacccgtgg gtgcctcccg catcacagcc aagtggtggg gaagcaagag
1801 gatcgactat gccctgtact gccctgatgt cctcacggcc ttccccaccg tggccctgcc
1861 ccacctcttc cacgccagtt actgggagtc cacagacgtg gtggccttca tcctgagaca
1921 ggtaatgcgc tatgagagcg tgaacatcaa ggaaagcgcc cgcctggacc ctgcagcact
1981 gagtcctgcc aacccccggg agaagtggct tcgtaagcgg actcaggtca agctgaggaa
2041 tgtcacggct aatcaccggg ccaatgatgt gattgctgct gaagatggcc cccaggtcct
2101 ggtggggcgg ttcatgtacg ggcccctcga catggtggct ctgactggag agaaggtgga
2161 catcctagta atggcagagc catcctcagg ccgctgggta cacctggaca cagagatcac
2221 caacagcagt ggtcgcatca catacaatgt gccgcggccc cggcgcctgg gggttggtgt
2281 ctatcctgtg aagatggtcg tcaggggcga ccagacctgt gccatgagct acctcacggt
2341 gttgcccagg ggcatggagt gtgtagtgtt cagcattgat gggtccttcg cggccagcgt
2401 gtctatcatg ggaagcgacc ccaaggtccg gccgggtgca gtggatgttg tccggcactg
2461 gcaggacttg ggctacatga tcctttacat cacgggacgg ccggacatgc agaagcagcg
2521 ggtggtgtcg tggctgtccc agcacaactt cccacagggc atgatcttct tctccgacgg
2581 gctggtgcat gacccgctgc ggcagaaggc catcttcctg cgcaacctca tgcaggagtg
2641 cttcatcaaa atcagtgcgg cctatggctc cacgaaggac atctctgtct acagcgtgct
2701 gggcctgcct gcctcccaga tcttcattgt gggccggccc accaagaagt accaaaccca
2761 gtgccagttc ctgagcgagg gctacgccgc acacctggcc gtgctggagg ccagccaccg
2821 ctcacgccca aagaagaaca actcgcgcat gatcctgcgc aagggcagct tcgggctgca
2881 cgcgcagcca gagttcctgc ggaagcgcaa ccacctgcgc agaaccatgt cagtgcagca
2941 gcccgacccg cccgccgcca accccaagcc cgagcgggcc cagagccagc ccgagtcgga
3001 caaagaccac gagcggccgc tgccggcgct cagctgggcg cgtgggcccc ccaagttcga
3061 gtcggtgccc tgaggggtgg gctgtgctca gagcagggag cgggggccg
//