LOCUS AF334585 5000 bp mRNA linear HUM 06-FEB-2001 DEFINITION Homo sapiens NIR3 mRNA, complete cds. ACCESSION AF334585 VERSION AF334585.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5000) AUTHORS Lev,S., Hernandez,J., Martinez,R., Chen,A., Plowman,G. and Schlessinger,J. TITLE Identification of a novel family of targets of PYK2 related to Drosophila retinal degeneration B (rdgB) protein JOURNAL Mol. Cell. Biol. 19 (3), 2278-2288 (1999) PUBMED 10022914 REFERENCE 2 (bases 1 to 5000) AUTHORS Lev,S., Hernandez,J., Martinez,R., Plowman,G.D. and Schlessinger,J. TITLE Direct Submission JOURNAL Submitted (08-JAN-2001) Department of Neurobiology, Weizmann, 76100 Rehovot, Rehovot 76100, Israel FEATURES Location/Qualifiers source 1..5000 /db_xref="H-InvDB:HIT000077794" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" CDS 79..4128 /note="similar to Drosophila retinal degeneration B (rdgB) protein" /codon_start=1 /product="NIR3" /protein_id="AAK01445.1" /translation="MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILE NRPYTDGPGGSGQYTHKVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCP FVEKFSIDIETFYKTDAGENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPK LFQSTKTQRGPLSENWIEEYKKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRR VMVRAHRQAWCWQDEWYGLSMENIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAV SDQTSGEPPEPSSSNGEPLVGRGLKKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIA RDSDESSDDEFFDAHEDLSDTEEMFPKDITKWSSNDLMDKIESPEPEDTQDGLYRQGA PEFRVASSVEQLNIIEDEVSQPLAAPPSKIHVLLLVLHGGTILDTGAGDPSSKKGDAN TIANVFDTVMRVHYPSALGRLAIRLVPCPPVCSDAFALVSNLSPYSHDEGCLSSSQDH IPLAALPLLATSSPQYQEAVATVIQRANLAYGDFIKSQEGMTFNGQVCLIGDCVGGIL AFDALCYSNQPVSESQSSSRRGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGSS GGGGSSGGSSLESSRHLSRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDTIQQHQAF LSSLHASVLRTEPCSRHSSSSTMLDGTGALGRFDFEITDLFLFGCPLGLVLALRKTVI PALDVFQLRPACQQVYNLFHPADPSASRLEPLLERRFHALPPFSVPRYQRYPLGDGCS TLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIASQVSGMAESYTASSIAQ KAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERAPGLPELDIGEVAAK WWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQVMRHDNSSILEL DGKEVSVFTPSKPREKWQRKRTHVKLRNVTANHRINDALANEDGPQVLTGRFMYGPLD MVTLTGEKVDVHIMTQPPSGEWLYLDTLVTNNSGRVSYTIPESHRLGVGVYPIKMVVR GDHTFADSYITVLPKGTEFVVFSIDGSFAASVSIMGSDPKVRAGAVDVVRHWQDLGYL IIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDGLVHDPLRHKANFLKLLISELHLRV HAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQCQFITDGYAAHLAQLKYSHRAR PARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQPSGPSHRHERTQSQADGEQR GQRSMSVAAGCWGRAMTGRLEPGAAAGPK" BASE COUNT 983 a 1648 c 1473 g 896 t ORIGIN 1 gcggccgcgt cgacaaggaa ccttgcctag aagtcccaac ttgcagttcc ccatcgacgg 61 gaaggcttgg actccaagat gattataaag gaatatcgga ttcctctgcc aatgaccgtg 121 gaggagtacc gcatcgccca gctgtacatg atacagaaga agagccgtaa cgagacatat 181 ggcgaaggca gcggcgtgga gatcctggag aaccggccgt acacagatgg cccaggcggc 241 tctgggcagt acacacacaa ggtgtatcat gtgggcatgc acattcccag ctggttccgc 301 tccatcctgc ccaaggcagc cctgcgggtg gtggaggagt cttggaatgc ctacccctac 361 acccgaacca ggttcacctg tcctttcgtg gagaaattct ccatcgacat tgaaaccttt 421 tataaaactg atgctggaga aaaccccgac gtgttcaacc tctctcctgt ggaaaagaac 481 cagctgacaa tcgacttcat cgacattgtc aaagaccctg tgccccacaa cgagtataag 541 acagaagagg accccaagct gttccagtca accaagaccc agcgggggcc cctgtccgag 601 aactggatcg aggagtacaa gaagcaggtc ttccccatca tgtgcgcata caagctctgc 661 aaggtggagt tccgctactg gggcatgcag tccaagatcg agaggttcat ccacgacacc 721 ggactacgga gggtgatggt gcgggctcac cggcaggcct ggtgctggca ggacgagtgg 781 tatgggctga gcatggagaa catccgggag ctggagaagg aggcacagct catgctttcc 841 cgtaagatgg cccagttcaa tgaggatggt gaggaggcca ctgagctcgt caagcacgaa 901 gccgtctcgg accagacctc tggggagccc ccggagccca gcagcagcaa tggggagccc 961 ctagtggggc gcggcctcaa gaaacagtgg tccacatcct ccaagtcgtc tcggtcgtcc 1021 aagcggggag cgagtccttc ccgccacagc atctcagagt ggaggatgca gagtattgcc 1081 agggactcgg atgagagctc agatgatgag ttcttcgatg cgcacgagga cctgtccgac 1141 acagaggaaa tgttccccaa ggacatcacc aagtggagct ccaatgacct catggacaag 1201 atcgagagcc cagagccgga agacacacaa gatggtctgt accgccaggg tgcccctgag 1261 ttcagggtgg cctccagtgt ggagcagctg aacatcatag aggacgaggt tagccagccg 1321 ctggctgcac cgccctccaa gatccacgtg ctgctattgg tgctgcacgg aggcaccatc 1381 ctggacacag gcgccgggga ccccagctcc aagaagggcg atgctaacac catcgccaac 1441 gtgttcgaca ccgtcatgcg cgtgcactac cccagcgccc tgggccgcct tgccatccgc 1501 ctggtgccct gcccgcccgt ctgctctgac gcctttgccc tggtctccaa cctcagcccc 1561 tacagccatg acgaaggctg tctgtccagc agtcaggacc acattcccct ggctgccctc 1621 cccctgctgg ccacctcctc cccccagtac caggaggcag ttgccacagt gattcagcga 1681 gccaaccttg cctatgggga cttcatcaag tcccaggagg gcatgacctt caatgggcag 1741 gtctgcctga ttggggactg cgtcgggggc atcctggcat ttgatgccct gtgctacagt 1801 aaccagccgg tgtctgagag tcagagcagc agccgccggg gcagcgtggt cagcatgcag 1861 gacaatgacc tgctgtcccc gggcatcctg atgaatgcag cacactgctg cggtggtggc 1921 ggtggcggcg gtggcggtgg tggcagcagt ggtggtggtg gcagtagtgg tggctccagc 1981 ctggagagca gtcggcacct gagccgaagc aacgtcgaca tcccccgcag caacggcact 2041 gaggacccca aaaggcaact gccccgcaag aggagcgact catccaccta cgagctggat 2101 accatccagc agcaccaggc cttcctgtcc agcctccatg ccagcgtgct gaggactgag 2161 ccctgctcac gccattccag cagctccacc atgctggatg gcacaggtgc cctgggcagg 2221 tttgactttg agatcaccga cctcttcctc ttcgggtgcc cgctggggct ggtcctggcc 2281 ttgaggaaga ctgtcatccc agccctggat gttttccagc tgcggccggc ctgccagcaa 2341 gtctacaacc tcttccaccc cgcggacccg tcagcttcac gcctggagcc gctgctggaa 2401 cggcgctttc acgccctgcc gcctttcagc gtcccccgct accaacgcta cccgctgggg 2461 gatggctgct ccacgctgct ggcggatgtg ctccagaccc acaatgcagc cttccaagag 2521 catggcgccc cctcctcgcc gggcactgcc cctgccagtc gtggcttccg ccgagccagt 2581 gagatcagca tcgccagcca ggtgtcaggc atggctgaga gctacacggc atccagcatc 2641 gcccagaagg cccccgatgc gctcagccat acccccagcg tcaggcgtct gtccctgctc 2701 gccctgcccg cccccagccc caccacccct ggcccccacc ctccagccag gaaggcaagc 2761 cctggcctgg agagggcccc tggcctccct gagctggaca ttggagaagt cgctgcaaag 2821 tggtggggcc agaagcggat cgactacgcc ctgtactgcc ctgacgccct cacggccttc 2881 cccacggtgg ctctgcctca cctcttccac gccagctact gggagtcaac agacgtggtc 2941 tcctttctgc tgagacaggt catgaggcat gacaactcca gcatcttgga gctggatggc 3001 aaggaagtgt cggtgttcac cccctcaaag ccaagggaga agtggcagcg caagcggacc 3061 cacgtgaagc tgcggaacgt gacggccaac caccggatca atgatgccct tgccaatgag 3121 gacggccccc aggttctgac gggcaggttc atgtatgggc ccctggacat ggtcaccctg 3181 actggggaga aggtggatgt gcacatcatg acccagccgc cctcaggcga gtggctctac 3241 ctggatacgc tggtgaccaa caacagtggg cgtgtctcct acaccatccc tgagtcgcac 3301 cgcctgggcg tgggtgtcta ccctatcaag atggtggtca ggggagacca cacgtttgcc 3361 gacagctaca tcaccgtgct gcccaagggc acagagttcg tggtcttcag catcgacggt 3421 tcctttgccg ctagcgtgtc catcatgggc agcgacccca aggtgcgggc cggggccgtg 3481 gacgtggtgc ggcactggca ggacctgggc tacctcatca tctacgtgac gggccggccc 3541 gacatgcaga agcagcgggt ggtggcgtgg ctggcccagc acaacttccc ccatggcgtg 3601 gtgtccttct gtgacggcct ggtgcatgac ccgctgcggc acaaggccaa cttcctgaag 3661 ctgctcatct ccgagctgca cctgcgcgtg cacgcggcct atggctccac caaggacgtg 3721 gcggtgtaca gcgccattag cctgtccccc atgcagatct acatcgtggg ccggcccacc 3781 aagaagctgc agcagcagtg ccagttcatc acggatggct acgcggccca cctggcgcag 3841 ctgaagtaca gccaccgggc gcggcccgct cgcaacacgg ccacccgcat ggcgctgcgc 3901 aagggcagct tcggcctgcc cggccagggc gactttctgc gctcccggaa ccacctgctt 3961 cgcaccatct cggcccagcc cagcgggccc agccaccggc acgagcggac acagagccag 4021 gcggatggcg agcagcgggg ccagcgcagc atgagtgtgg cggccggctg ctggggccgc 4081 gccatgactg gccgcctgga gccgggggca gccgcgggcc ccaagtaggg caccgtgagt 4141 gcagcgcggg gtctccatgg tgctaggcca gggtggccag ccccgccagg aggcctggcc 4201 tgggcacacg cactgacgtg ggcctgggag attgtcccag ggccttgtgg aggacacggg 4261 ccgcaccaca cagtgctccc tgccctgcct cacgtcctcg ggcctgacgg gtccggcttg 4321 tcatggaagc tggcagggac caccagcccc aggatggcag agggaccaga acctcccact 4381 cagactggcc cgggaggttc tcccagacat tttgccctgt gtggatctcc aagtgtcctg 4441 gtgccaggtg tgggcccagg cgcagcctgc cacctcccca tccactggcc accctcactc 4501 ccaggtcccc tcccatttgg tagcagctcc aacaggggtc cagcctgcat cttgttaact 4561 cgagtttctc aactgttcaa cctcactggt tttgcactga tttttgagag cggagaccca 4621 ttaccacctc ctatggctac agccccgttg acatgcatga aactcagtac ctgctgaccc 4681 aggacctaca accacactga aggctccagt gcggcagagc ctcgtgcaag caggagagaa 4741 aggctgtatc ttaatttctg caccccggac cctgcccacc tgtctgcctg ccccgcctgg 4801 agcccaggcc agtgttgttt ccagcctcag gccacgggct ggacgggcct ggccgcctct 4861 tccgctccct gccatcagtc aaggccgccc gcccacgttt ctacgccttt ctacttctca 4921 atctgatttc tatgaggttt ttttaaacga gcaatccttg gctgcttcct tttcttaact 4981 ctttcagtac tgagagcagc //