LOCUS AF330693 4122 bp mRNA linear HUM 01-MAR-2002
DEFINITION Homo sapiens alpha 1 chain-like collagen COLA1L precursor (COLA1L)
mRNA, complete cds.
ACCESSION AF330693
VERSION AF330693.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4122)
AUTHORS Chou,M.Y. and Li,H.C.
TITLE Genomic organization and characterization of the human type XXI
collagen (COL21A1) gene
JOURNAL Genomics 79 (3), 395-401 (2002)
PUBMED 11863369
REFERENCE 2 (bases 1 to 4122)
AUTHORS Chou,M.-Y.
TITLE Cloning and identification of a novel human alpha 1 chain-like
collagen (COLA1L) gene, a new member of the FACIT family
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4122)
AUTHORS Chou,M.-Y.
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2000) Biomedical Engineering Center, Industrial
Technology Research Institute, 195-85, Sec. 4, Chung Hsing Rd.,
Chutung, Hsinchu 310, Taiwan
FEATURES Location/Qualifiers
source 1..4122
/db_xref="H-InvDB:HIT000077657"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6p12.3-p11.2"
gene 1..4122
/gene="COLA1L"
CDS 163..3027
/gene="COLA1L"
/codon_start=1
/product="alpha 1 chain-like collagen COLA1L precursor"
/protein_id="AAL50033.1"
/translation="MAHYITFLCMVLVLLLQNSVLAEDGEVRSSCRTAPTDLVFILDG
SYSVGPENFEIVKKWLVNITKNFDIGPKFIQVGVVQYSDYPVLEIPLGSYDSGEHLTA
AVESILYLGGNTKTGKAIQFALDYLFAKSSRFLTKIAVVLTDGKSQDDVKDAAQAARD
SKITLFAIGVGSETEDAELRAIANKPSSTYVFYVEDYIAISKIREVMKQKLCEESVCP
TRIPVAARDERGFDILLGLDVNKKVKKRIQLSPKKIKGYEVTSKVDLSELTSNVFPEG
LPPSYVFVSTQRFKVKKIWDLWRILTIDGRPQIAVTLNGVDKILLFTTTSVINGSQVV
TFANPQVKTLFDEGWHQIRLLVTEQDVTLYIDDQQIENKPLHPVLGILINGQTQIGKY
SGKEETVQFDVQKLRIYCDPEQNNRETACEIPGFCLNGPSDVGSTPAPCICPPGKPGL
QGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRD
GDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAG
EPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQ
QGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEP
GYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPG
VRGAIGSKGESGVDGLMGPAGPKGQPGDPGPQGPPGLDGKPGREFSEQFIRQVCTDVI
RAQLPVLLQSGRIRNCDHCLSQHGSPGIPGPPGPIGPEGPRGLPGLPGRDGVPGLVGV
PGRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISKEGPPGDPGLPGK
DGDHGKPGIQGQPGPPGICDPSLCFSVIARRDPFRKGPNY"
sig_peptide 163..228
/gene="COLA1L"
regulatory 4072..4077
/regulatory_class="polyA_signal_sequence"
/gene="COLA1L"
BASE COUNT 1280 a 769 c 996 g 1077 t
ORIGIN
1 tggttctggc caagggagtt catacccact caaagattat attacgaatt tcagatggga
61 gcttctctca acctgcagcc accacatgag ttagctggcc gacttctgtg aggttcccag
121 tgaggaatcc taaaaccaaa atattagaac gaaaacagaa acatggctca ctatattaca
181 tttctctgca tggttttggt gctgcttctt cagaattctg tgttagctga agatggggaa
241 gtaagatcaa gttgtcgtac tgctccgaca gatttagttt tcatcttaga tggctcttat
301 agtgttggcc cagaaaactt tgaaatagtg aaaaagtggc ttgtcaatat cacaaaaaac
361 tttgacatag ggccgaagtt tattcaagtt ggagtggttc aatatagtga ctaccctgtg
421 ctggagattc ctctcggaag ctatgattca ggagaacatt tgacggcagc agtggaatcc
481 atactctact taggaggaaa cacaaagaca gggaaggcca tccagtttgc gctcgattac
541 ctttttgcca agtcctcacg atttctgact aagatagcag tggtacttac ggatggcaaa
601 tcccaagatg acgtcaagga tgcagctcaa gcagcaagag atagtaagat aacattattt
661 gctattggtg ttggttcaga aacagaagat gccgaactta gagctattgc caacaagcct
721 tcgtctactt atgtgtttta tgtggaagac tatattgcaa tatccaaaat aagggaagtg
781 atgaagcaga aactttgtga agaatctgtc tgtccaacac gaattccagt ggcagctcgt
841 gatgaaaggg gatttgatat tcttttaggt ttagatgtaa ataaaaaggt taagaaaaga
901 atacagcttt caccaaaaaa gataaaagga tatgaagtaa catcaaaagt tgatttatca
961 gaactcacaa gcaatgtttt cccagaaggt cttcctccat catatgtatt tgtgtctact
1021 caaagattta aagtcaagaa aatttgggat ttatggagaa tattaactat tgatggaagg
1081 ccacaaatag cagttacctt aaatggtgtg gacaaaatct tattatttac aacaaccagc
1141 gtaattaatg gctcacaagt ggttaccttt gctaaccctc aagttaagac gttgtttgat
1201 gaaggctggc accaaattcg tctcttagta acagaacaag atgtgacttt gtatattgat
1261 gaccaacaaa ttgaaaacaa gcccttacat ccagttttag ggatcttgat caatgggcaa
1321 acccaaattg gaaaatattc tggaaaagaa gaaactgttc agtttgatgt ccaaaagttg
1381 cgaatctact gtgacccaga acagaacaac cgggagacag catgtgagat tcctggattt
1441 tgccttaatg gtcccagtga tgtaggttca actccagctc cctgtatttg tcctccggga
1501 aaaccaggac ttcaaggccc caaaggtgac cctggactgc ctgggaaccc tggctaccct
1561 ggacaacctg gtcaagatgg taagcctgga tatcagggaa ttgcagggac accaggtgtt
1621 ccaggatctc caggaataca aggagctcga ggactaccag gttacaaagg agaaccaggg
1681 cgagatggtg acaagggtga tcgtggactt cctggttttc ctgggcttca tggcatgcca
1741 ggatcaaagg gtgaaatggg tgccaaagga gacaaaggat cacctggatt ttatggcaaa
1801 aagggtgcaa aaggtgaaaa ggggaatgct ggcttccctg gcctccctgg acctgctgga
1861 gaaccaggaa gacatggaaa ggatggatta atgggtagtc ccggtttcaa gggagaagca
1921 ggatcccctg gtgctccggg gcaggatgga acacggggag agcctggaat cccaggattt
1981 cctggaaacc gaggattaat gggccaaaag ggagaaattg ggcctccagg acagcaagga
2041 aaaaaaggag ccccagggat gcctggttta atgggaagca atggctcacc aggccagcct
2101 ggaacaccgg gatctaaggg aagcaaaggt gaacctggaa ttcaagggat gcctggggct
2161 tctgggctca agggagaacc aggagcaacg ggttccccag gagaaccagg atacatgggt
2221 ttacccggga ttcaaggaaa aaagggggac aaaggaaatc aaggtgaaaa aggtattcag
2281 ggtcaaaagg gagaaaatgg aagacaggga attccagggc aacagggaat tcaaggccat
2341 catggtgcaa aaggagagag aggtgaaaag ggagaacctg gtgtccgagg tgccattgga
2401 tcaaaaggag aatctggggt ggatggcttg atggggcccg caggtcctaa ggggcaacct
2461 ggggatccag gtcctcaggg acccccaggt ttggatggga agcccggaag agagttttca
2521 gaacaattta ttcgacaagt ttgcacagat gtaataagag cccagctacc agtcttactt
2581 cagagtggaa gaattagaaa ttgtgatcat tgcctgtccc aacatggctc cccgggtatt
2641 cctgggccac ctggtccgat aggcccagag ggtcccagag gattacctgg tttgccagga
2701 agagatggtg ttcctggatt agtgggtgtc cctggacgtc caggtgtcag aggattaaaa
2761 ggcctaccag gaagaaatgg ggaaaaaggg agccaagggt ttgggtatcc tggagaacaa
2821 ggtcctcctg gtcccccagg tccagagggc cctcctggaa taagcaaaga aggtcctcca
2881 ggagacccag gtctccctgg caaagatgga gaccatggaa aacctggaat ccaagggcaa
2941 ccaggccccc caggcatctg cgacccatca ctatgtttta gtgtaattgc cagaagagat
3001 ccgttcagaa aaggaccaaa ctattagtgt ctgatgcctc attcagcagc ctaggcatgg
3061 tgctttttct gtggtctttt gcatctcagg aagataacca acagtaatcc cttgaaaaga
3121 aacttaagta cctcggtgtt tttatttttt ttttcttatg gaaaaaaata taaaagatca
3181 catatactga ttttaaaggc tcctcagtca tttggagccc ttggattagc agcattaatt
3241 aaatctcaag ggtttcttgt aaagtccatt tatgttaatc aaagttgaat ataaaaatcc
3301 accattgcct gttagccagt cagttttagt cactgtgaaa tatttcacat tcagcctcca
3361 tgcagtagag atttgagttt aatttcatgt ccatgtgact ttcatgtttc ctatctcata
3421 gctcatgcta ctacataagc caaaacatgt atctcatcat tggaagtaag atcagggctg
3481 atattcacct gggatagaca gtattggtga actactcatt tactacagtg tctcagcctt
3541 gataaggggc agtggattgc ctgttgttcg gtgttgtgaa tagcacctct gaataagatt
3601 agagtgtttc ttaattcatt tcaaactcta aaattagatt aatggtggtg ctaagaaaga
3661 gtattaatta ctttgggaat ggtcaaaatt aacattaaaa acattttaga caaaaagttt
3721 cattgtacat tcaaagaaaa tgtaagtttg gaagtactaa aagactattt tatacttgtt
3781 gattaatcgg aatgtttgtt gtatgccttc attttccatt tcacttatat gtgtatgtcc
3841 atatatgtta attttcattg tagcaaagct aatggaaata aagctaatgc tctagttgaa
3901 agaaaaggaa aactcctgaa atcctagaat gtcttgttat ttttagctga ctgtaaaata
3961 ttatgaacag tctttgtgta ttgtgcttaa tgcttttgta agaaacagaa tttgaaatat
4021 ttcatccttg tcatgctcaa aattttgtta catgcttgtt attcagagta taataaagtt
4081 ttgtacaggc ctgaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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