LOCUS AF329369 4613 bp mRNA linear HUM 16-MAY-2001
DEFINITION Homo sapiens protocadherin-beta (PCDHpsi-5) pseudogene, mRNA
sequence.
ACCESSION AF329369
VERSION AF329369.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4613)
AUTHORS Vanhalst,K., Kools,P., Vanden Eynde,E. and van Roy,F.
TITLE The human and murine protocadherin-beta one-exon gene families show
high evolutionary conservation, despite the difference in gene
number
JOURNAL FEBS Lett. 495 (1-2), 120-125 (2001)
PUBMED 11322959
REFERENCE 2 (bases 1 to 4613)
AUTHORS Vanhalst,K., Kools,P.F.J. and van Roy,F.
TITLE Direct Submission
JOURNAL Submitted (14-DEC-2000) Department of Molecular Biology, Ghent
University, Flanders Interuniversity Institute for Biotechnology
(VIB), Ledeganckstraat 35, Ghent B-9000, Belgium
FEATURES Location/Qualifiers
source 1..4613
/db_xref="H-InvDB:HIT000077598"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31-q33"
gene 1..4613
/gene="PCDHpsi-5"
/note="protocadherin-beta; PCDHbeta19p"
/pseudo
BASE COUNT 1281 a 1036 c 1015 g 1281 t
ORIGIN
1 tttttttttt aatttctccc ctcgggtcat ttttaacaat aacaaaaaat attttcagct
61 gaaacttcag accggagacc tgcaagtaaa tgagacattg gaccgggaag aattgtgtag
121 aatcactgag ccttgtgtgc tgcaattcca agtgttactg gaagaacctt tggaggttta
181 aacttttggt cagtgacata aacacaattc ccctgtattc ccagaagcag aaattatttt
241 gaaatcatgg aaaatactcc tccaggaact gtgtttcctc tgaaaaatac acaagatttg
301 gatgtggcca tcaataacat ccaaaactac accatctacc cctactccca tgtccacgct
361 ctcacccaaa atggcagtga aggcagaaaa tacccagagc tggttctgga caaagccctg
421 gatcgggagg agcaggctga gatcaggtta actctcatgg cagtagatgg cgggactcct
481 cccagaactg ggactgctct ggtcctcatt gaaatcttgg acatcaatga caatgcacct
541 gagtttgtgt agccactcta tcaggtgcag atatcagaaa acagccccct ggattccctt
601 gttgccactg tttccgctag agattcagac atgggaatta atggtgagat attctactca
661 ttttttatgg tgatgaagag atttctaaga catttgcact taatgaacga aggggagaaa
721 ttaaaataat cagaaaacta gattttgaaa aaattgtgtc atatcaggtg gatattaaag
781 cctctgatgg ggcaggtctt tctggaaaat gcactgtcat aatacaggtg gtagatatca
841 acgataacgc tccggaactg accatggctt cattcacaag ccccatccgc gaaaattctc
901 ctgagaccgt tgcagctctt ttcagcattc aagaccgcga ttctgggaaa aatggaagaa
961 tagtttgatc aattcaaaat gatgttccgt tcatgccgaa accttccgtt gagaatttat
1021 actggctgtt aacagaagga ccactggaca aagagattag agccgagtac aacatcacca
1081 acacagccac ggacttgggg actcctaggc tgaaaaccga gtgcaacata acggtgctgg
1141 tctcctacgt caatgacaaa gcccccacct tcacctaaac ctcctacacc ctgttcgtcc
1201 gcgagaacaa cagccccgcc ctgcatattg gcagcgtcag caccgcagag actcgggcac
1261 caacatccag gtcacctact cgctgctgcc gccccggaac ccgcacctgc ccctcgcctc
1321 cctggtctcc atcaacacag acaacggcca cctgttcgcc ctcaggtcgc tggactacga
1381 ggccctgcag gagttcgagt tccgcgtggg cgcttcagac cgcggctcca cggcgctgag
1441 cagcgaggcg ctggtgcgcg tgctggtgct ggacgccaac gacagctcac tcttcgtgct
1501 gttcccgctg cagaacggct ccgcgccctg caccgagctg atgccccggg cgggccgccg
1561 agccgggcta cctggtgacc aaggtggtgg cggtggacgg tgactcgggc cagaacgcct
1621 ggctgtcgta gcagttgctc aaggccacgg agccagggct gttcggcgtg tgggcgcaca
1681 atgcactgac aggctgctga gcgagcgtga cacagccaag cacaggctga tggtcctggt
1741 caaggacaat ggcgagcctc cgcgctcggc caccgccacg ctgcacgtgc tcctggtgga
1801 tggcttctcc ctgccctact tgccgttccc tgaagcggcc ccggcccagg cccaggccga
1861 cttgctcacc gtctacctgg tggtggcgtt ggccttggtg tcgtcgttct tcctcttctc
1921 ggtgctcctg ttcgtggcgg tgcggctgtg caggaggagc agggaggcct cattgggtcg
1981 ctgctcggtg cccgaggacc cctttccagg catctggtgg acgtgagcga caccaggacc
2041 ctatcccaga ggtacaagta tgaagtgttt ctgacgcgag gctccgggac aaatgaattc
2101 aaattcctga agtctgttat ccctaagcat ccgggcgctg tgaatgatgg gaggaaaagt
2161 ccaactttgt aaatggtttt ggattcaatt aagaatctgt agatttttca gagcatttag
2221 gataaaggtt agtcctttat caatatatta agtctctgtt atgttttttg tgctatatgg
2281 attttctaag atttttgctg atttcatttt cctacttaag attagacatt ttctttgatt
2341 atttgttcat acttggtctc cttttatcat gtccattttg atgaatacaa ctttcaggtt
2401 tactcattaa tgaaaagtaa tatttgttca atttatcaac ttttcaaaat cacaggctgt
2461 tgacttgaag actccagctc cattccgttt cattaaagaa agcttttcta aacttttgat
2521 gcttagaaga caggaacgat gatatagtga ttattagtac atattctatt gattctgtct
2581 tatgcttacc tgtcttgaat ttttaaatgg agaagcgtct gcaaaaattg catcgtttta
2641 tttcacaata gcttgaagtg ggaaagacta catttttccc caaacttaaa gacttttctg
2701 ctctttttat aaccttcact ccataacata tatgagcatt attattacta ttattgagtc
2761 agagtttcac tcttgtcgcc caggctggag tgcagtggcg cgatctgggc tcactgcagc
2821 ctcgcctccc cggttcgggc gattctcctg cctcagcctc ccgagtagct gggattacag
2881 gctccttgtt ttagtagaga tggggtttca ccatgttggc caaactcaaa ctgacctcgg
2941 gtgatacact cgcttctgcc tcccaaagtg tggcattaca ggtgtgagcc accttgcccg
3001 gccatacgag catctttagt gattattaga ttatctcaag attttaaaat catagctccc
3061 ttttgtagcg tctatctagc ccacctgatc tttttctgga aaattctccc tgtctttggc
3121 tgaagtgtaa tgttgcagcc acatttattt tatatgaccc acctccctct gtgatttcaa
3181 acacaaaaat aagatgatcc tagctggcct aatctgattc tctctgttta aaaaaaaatg
3241 gctttaagaa ccagatacaa catagtctct ttgttaggaa cataagcaga aagtggtgtc
3301 atatttggct aaacacttgc aaagaaatac agaacatcaa tctattgaga gacaagaaaa
3361 aataaggtac caaaagaatg accttgtcat agattttcct gttttagatt ttccagtccc
3421 tcccaagtct ttttccctta ggttgctgga gacaaatttg tgctctttaa taaatttccc
3481 tctaattaaa aaatctaagt gaggtttttg ttgtcaaaag catgtttaga tattcctgca
3541 ttgttggtaa gttagacctt tcttcctatt gggtttttat tgtggctttt catattagta
3601 tgacaacatt tgggatcaag gaggttgtaa aatattagta gtctataagg gacatgcact
3661 agcttttgtc agaatataca attttgagaa aaactgaagg atctttccaa tggtacagtc
3721 tttgaagtgt ttaatagaaa ttcttagaac attttattat ataagagttt tgaatatcgt
3781 aagtgtcata ataacattac tgtaaaaaaa aaaccttgac aatgaaaaat gtgtgtctaa
3841 aagagacata atccttatct ttagggtcat cataatcttg ttatgttctt tctttctgtc
3901 atataatata tcccttgctt atgggtaggt aagttgtttt gccacttaat gaaatgacat
3961 tttaggtcat tctgagttat ttcacattac tatttaaagg gcataagaaa aaaccaacct
4021 aagaaaaagg tggccttggt taaccaacct aaaaaaagaa actgaaaccc aaaaaaaaaa
4081 ggaaattcca aaagaagaag aaaaaccaac cggcaaaaag gttaaaataa atgggaatta
4141 ataaatggat ccatttaaca aatatttatt gagcacgtac catgtgccag ggattatttt
4201 agatattggg gatgcagcag tgaacaaaat gaagttctaa catgtgaggt tgaaacagaa
4261 aggaaacaac taaataagta catctatact acgtcagata ataaatacga gagagacaag
4321 gcagggctgg gtacagcagc tcatgcctat aaccccagca ctttgggagg ctgaggcagg
4381 aggattgctt gagctcggaa atttgagacc agcccgggca acatagcaag acctcatctt
4441 tacaaataat taaaacatta gccaggcatg gtgatgcgca actgtggtcc cagctacagt
4501 tgctgaggtg gggggattgc ttgagcctgg gtagtcaagg ctgcagtgag cagtgattgt
4561 gccactgcac tccctcctgg acaacagagc aagaccccat ctcaaaaaaa aaa
//