LOCUS AF318576 2355 bp mRNA linear HUM 31-JAN-2001
DEFINITION Homo sapiens UPF3X (UPF3X) mRNA, complete cds.
ACCESSION AF318576
VERSION AF318576.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2355)
AUTHORS Serin,G., Gersappe,A., Black,J.D., Aronoff,R. and Maquat,L.E.
TITLE Identification and characterization of human orthologues to
Saccharomyces cerevisiae Upf2 protein and Upf3 protein
(Caenorhabditis elegans SMG-4)
JOURNAL Mol. Cell. Biol. 21 (1), 209-223 (2001)
PUBMED 11113196
REFERENCE 2 (bases 1 to 2355)
AUTHORS Serin,G., Gersappe,A., Black,J.D., Aronoff,R. and Maquat,L.E.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2000) Department of Biochemistry and Biophysics,
School of Medicine and Dentistry, Rochester, NY 14642, USA
FEATURES Location/Qualifiers
source 1..2355
/db_xref="H-InvDB:HIT000077312"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2355
/gene="UPF3X"
CDS 21..1472
/gene="UPF3X"
/note="alternatively spliced; interacts with UPF2; similar
to Saccharomyces cerevisiae Upf3 and Caenorhabditis
elegans SMG-4"
/codon_start=1
/product="UPF3X"
/protein_id="AAG60691.1"
/translation="MKEEKEHRPKEKRVTLLTPAGATGSGGGTSGDSSKGEDKQDRNK
EKKEALSKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFK
NQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEY
RKFLESYATDNEKMTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREER
RRREIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHRFLLQ
AVNQKNLLKKPEKGDEKELDKREKAKKLDKENLSDERASGQSCTLPKRSDSELKDEKP
KRPEDESGRDYREREREYERDQERILRERERLKRQEEERRRQKERYEKEKTFKRKEEE
MKKEKDTLRDKGKKAESTESIGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRN
RLCPPDDSTKSGDSAAERKQESGISHRKEGGEE"
BASE COUNT 885 a 365 c 588 g 517 t
ORIGIN
1 ttcagcgggg gacgtagcca atgaaggaag agaaggagca caggcctaag gagaagcgag
61 taaccctgtt aacccccgcc ggggccacag gcagcggtgg tgggacctcg ggggacagct
121 ccaaggggga agataagcag gatcgcaaca aggagaagaa agaagcgctg agcaaggtgg
181 taattcgaag attacctccc actttgacca aggagcagct tcaggaacat cttcaaccta
241 tgcctgagca tgattatttt gagttttttt ctaatgatac gagtttgtat cctcatatgt
301 atgccagagc atacatcaac tttaaaaacc aagaggacat tattttgttc agggatcgct
361 ttgatggtta tgtattcctt gacaataaag gtcaggaata tcccgctata gtagaatttg
421 caccttttca aaaagctgca aaaaagaaga ctaagaaaag agataccaaa gtcgggacta
481 tcgatgatga tccagaatat agaaagtttt tggaaagtta tgccacagat aatgagaaaa
541 tgacatctac tccagagaca ctgctagagg aaatagaagc aaaaaataga gaattaatag
601 ctaaaaagac aaccccactt ttgagcttcc tgaaaaacaa gcagagaatg agagaagaaa
661 agagagaaga aaggaggagg agagaaatag aaagaaaaag acaaagagaa gaagagagga
721 ggaaatggaa agaagaagag aaacgaaaaa ggaaagatat agaaaagcta aagaagatag
781 acagaattcc agaaagggac aaattaaagg atgaaccaaa gattaaggta cacaggtttc
841 tgttacaagc tgtgaatcag aaaaatctgc tcaagaagcc agaaaaagga gatgaaaaag
901 aattggacaa aagagaaaaa gccaagaaat tggacaaaga gaatctcagt gatgaaagag
961 ccagtgggca aagttgtaca ttgcccaagc gttctgatag cgaacttaaa gatgaaaaac
1021 caaagagacc tgaagatgag agcggcagag actataggga gagggaacgg gaatatgaac
1081 gagatcagga gcgcatactt cgagaaagag agaggctgaa gcggcaagaa gaagagcgcc
1141 gtaggcagaa ggagcgctat gagaaagaga agacttttaa gagaaaagaa gaagaaatga
1201 aaaaagagaa agacacactt cgggataaag gaaagaaggc tgaaagtaca gaatcaatag
1261 gcagctcaga aaaaactgaa aagaaagaag aagtggtcaa gagagatcga ataagaaaca
1321 aggatcgtcc agcgatgcag ctttaccaac caggagctcg aagccgaaat cgactctgtc
1381 cccctgatga cagcaccaag tctggagatt cagcagcaga aaggaagcag gaaagtggta
1441 ttagccatag aaaagaagga ggagaggagt gataagtcca gatggcctta ggtgtcctga
1501 ctgtctaggc agccaaagag cacacgttaa gcaatccaga ggtgccttca gggcaaagaa
1561 tagagagaaa gggagccgct gtgctggtgg ggtacactgc agaggagtaa gtcttgtgtc
1621 aaagcaggaa tctgatcaga ggttcagaat tggaagtaca atttcattgc ttttgcaatt
1681 tctacaaatt aattttaaag tgtcagaaaa aggtgacggc aaggacatgc attgcaattt
1741 gcagggggaa ttgtcaagtg aggacttcat cacatatgac acgagagaaa agtaagagct
1801 ggttctaaaa tcaaaagctg ttgttcatcc tgaattgaat tttctgaatt tgggtggagc
1861 agagtcgctt tgaagccttg ttccgatcta attctattgt attgttgatg ataagtgttg
1921 acattgggta gtgtagaagc aacaagcatg tccttgtagt acaggtacag tgaaggatag
1981 aacacacttt cgttgataca aaaatttaaa tagttatgtt acttctgtat ccagtgtcct
2041 aaagttttag gattagtttt agttttttgt ttgcttatat gagcttagcg taaagaatat
2101 ttttaaactt cgtgttttgt catcagcatc ttttctatta agaggtaaaa tgtagtcctt
2161 gtttgactct tgacaatcca gtgtgtttga tcttaggtct catgatctga gtgcataccc
2221 tctccaggaa ggaaactgca ccagtgtcta ttcctgttaa atagcaactt ttagtctcag
2281 cttgtttcgt tttgatgtca ataaatagta acagcattca aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aaaaa
//