LOCUS AF317391 5708 bp mRNA linear HUM 20-DEC-2000
DEFINITION Homo sapiens BCL-6 corepressor (BCOR) mRNA, complete cds;
alternatively spliced.
ACCESSION AF317391
VERSION AF317391.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5708)
AUTHORS Huynh,K.D., Fischle,W., Verdin,E. and Bardwell,V.J.
TITLE BCoR, a novel corepressor involved in BCL-6 repression
JOURNAL Genes Dev. 14 (14), 1810-1823 (2000)
PUBMED 10898795
REFERENCE 2 (bases 1 to 5708)
AUTHORS Huynh,K.D. and Bardwell,V.J.
TITLE Direct Submission
JOURNAL Submitted (27-OCT-2000) Genetics, Cell Biology and Development,
University of Minnesota-Minneapolis, 6-160 Jackson Hall, 321 Church
St. SE, Minneapolis, MN 55455, USA
FEATURES Location/Qualifiers
source 1..5708
/db_xref="H-InvDB:HIT000077188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="frontal cortex"
/dev_stage="adult"
gene 1..5708
/gene="BCOR"
CDS 252..5417
/gene="BCOR"
/note="transcriptional corepressor; BCoR; alternatively
spliced"
/codon_start=1
/product="BCL-6 corepressor"
/protein_id="AAG41429.1"
/translation="MLSATPLYGNVHSWMNSERVRMCGASEDRKILVNDGDASKARLE
LREENPLNHNVVDASTAHRIDGLAALSMDRTGLIREGLRVPGNIVYSSLCGLGSEKGR
EAATSTLGGLGFSSERNPEMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAV
ATAEALGLDRPASDKQSPLNINGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMY
KALLPQQSYSLAQPLYSPVCTNGERFLYLPPPHYVGPHIPSSLASPMRLSTPSASPAI
PPLVHCADKSLPWKMGVSPGNPVDSHAYPHIQNSKQPRVPSAKAVTSGLPGDTALLLP
PSPRPSPRVHLPTQPAADTYSEFHKHYARISTSPSVALSKPYMTVSSEFPAARLSNGK
YPKAPEGGEGAQPVPGHARKTAVQDRKDGSSPPLLEKQTVTKDVTDKPLDLSSKVVDV
DASKADHMKKMAPTVLVHSRAGSGLVLSGSEIPKETLSPPGNGCAIYRSEIISTAPSS
WVVPGPSPNEENNGKSMSLKNKALDWAIPQQRSSSCPRMGGTDAVITNVSGSVSSAGR
PASASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEP
SFKANENGLPPSSIFLSPNEAFRSPPIPYPRSYLPYPAPEGIAVSPLSLHGKGPVYPH
PVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDALGLGMVHPMLIPHTPIEITKE
EKPERRSRSHERARYEDPTLRNRFSEILETSSTKLHPDVPTDKNLKPNPNWNQGKTVV
KSDKLVYVDLLREEPDAKTDTNVSKPSFAAESVGQSAEPPKPSVEPALQQHRDFIALR
EELGRISDFHETYTFKQPVFTVSKDSVLAGTNKENLGLPVSTPFLEPPLGSDGPAVTF
GKTQEDPKPFCVGSAPPSVDVTPTYTKDGADEAESNDGKVLKPKPSKLAKRIANSAGY
VGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAMMRFSELEMKE
REGGHPATKDSEMCKFSPADWERLKGNQDKKPKSVTLEEAIAEQNESERCEYSVGNKH
RDPFEAPEDKDLPVEKYFVERQPVSEPPADQVASDMPHSPTLRVDRKRKVSGDSSHTE
TTAEEVPEDPLLKAKRRRVSKGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVT
QATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSEESLKPSDNEQGLPVFSGSPPMKSL
SSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNS
EKPSGKRLCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPA
KQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRA
ARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQ
DGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDL
QGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDDAYSDVFEFEFSET
PLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVS
ASLLFSCSKDLEAFNPESKELLDLVEFTNEIQTLLGSSVEWLHPSDLASDNYW"
BASE COUNT 1477 a 1630 c 1427 g 1174 t
ORIGIN
1 ggtccccggc tgcccgcagc ccgctcgcgg cgcttctccg gcccggctcc ttctccgctc
61 gttaacgtcg ccaacccccc ccacccctca tatctctctc cacccaccca accgcccccc
121 gctccttctc gccgcctcga gtccgcttgg gggaaaactt caaagagccg gatcgcaggc
181 tccctgccta ctcccccacc ggggatttca gactagacgc ttgaagcaaa gctgccatcc
241 cagaagacga catgctctca gcaacccccc tgtatgggaa cgttcacagc tggatgaaca
301 gcgagagggt ccgcatgtgt ggggcgagcg aagacaggaa aatccttgta aatgatggtg
361 acgcttcaaa agccagactg gaactgaggg aagagaatcc cttgaaccac aacgtggtgg
421 atgcgagcac ggcccatagg atcgatggcc tggcagcact gagcatggac cgcactggcc
481 tgatccggga agggctgcgg gtcccgggaa acatcgtcta ttctagcttg tgtggactgg
541 gctcagagaa aggtcgggag gctgccacaa gcactctagg tggccttggg ttttcttcgg
601 aaagaaatcc agagatgcag ttcaaaccga atacacccga gacagtggag gcttctgccg
661 tctctggaaa acccccaaat ggcttcagtg ctatatacaa aacaccgcct ggaatacaaa
721 aaagtgctgt agccacagca gaagcgctgg gcttggacag gcctgccagc gacaaacaga
781 gccctctcaa catcaatggt gctagttatc tgcggctgcc ctgggtcaat ccttacatgg
841 agggtgccac gccagccatc taccctttcc tcgactcgcc aaataagtat tcactgaaca
901 tgtacaaggc cttgctacct cagcagtcct acagcttggc ccagccgctg tattctccag
961 tctgcaccaa tggggagcgc tttctctacc tgccgccacc tcactacgtc ggtccccaca
1021 tcccatcgtc cttggcatca cccatgaggc tctcgacacc ttcggcctcc ccagccatcc
1081 cgcctctcgt ccattgcgca gacaaaagcc tcccgtggaa gatgggcgtc agccctggga
1141 atcctgttga ttcccacgcc tatcctcaca tccagaacag taagcagccc agggttccct
1201 ctgccaaggc ggtcaccagt ggcctgccgg gggacacagc tctcctgttg cccccctcgc
1261 ctcggccgtc accccgagtc caccttccca cccagcctgc tgcagacacc tactcggagt
1321 tccacaagca ctatgccagg atctccacct ctccttcagt tgccctgtca aagccataca
1381 tgacagttag cagcgagttc cccgcggcca ggctctccaa tggcaagtat cccaaggctc
1441 cggaaggggg cgaaggtgcc cagccagtgc ccgggcatgc ccggaagaca gcggttcaag
1501 acagaaaaga cggcagctca cctcctctgt tggagaagca gaccgttacc aaagacgtca
1561 cagataagcc actagacttg tcttctaaag tggtggatgt agatgcttcc aaagctgacc
1621 acatgaaaaa gatggctccc acggtcctgg ttcacagcag ggctggaagt ggcttagtgc
1681 tctccggaag tgagattccg aaagaaacac tatctcctcc aggaaatggt tgtgctatct
1741 atagatctga aatcatcagc actgctccct catcctgggt ggtgcccggg ccaagtccta
1801 acgaagagaa caatggcaaa agcatgtcgc tgaaaaacaa ggcattggac tgggcgatac
1861 cacagcagcg gagttcatca tgcccgcgca tgggcggcac cgatgctgtc atcactaacg
1921 tttcagggtc agtgtcgagt gcgggccgcc cagcctccgc atcacccgcc cccaatgcca
1981 atgcagatgg caccaaaacc agcaggagct ctgtagaaac cacaccatcc gttattcagc
2041 acgtgggcca gcccccggcc actcctgcca agcacagtag cagcaccagc agcaagggcg
2101 ccaaagccag caacccagaa ccgagtttca aagcaaacga gaacggcctt ccaccaagct
2161 ctatatttct gtctccaaat gaggcattca ggtccccacc aattccctac cccaggagtt
2221 acctccctta cccagcccct gagggcattg ctgtaagtcc cctctcctta catggcaaag
2281 gacctgtcta ccctcaccca gttttgttac ccaatggcag tctgtttcct gggcaccttg
2341 ccccaaagcc tgggctgccc tatgggcttc ccaccggccg tccagagttt gtgacctacc
2401 aagatgccct ggggttgggc atggtgcatc ccatgttgat accacacacg cccatagaga
2461 ttactaaaga ggagaaacca gagaggagat cccggtccca tgagagagcc cgttacgagg
2521 acccaaccct ccggaatcgg ttttccgaga ttttggaaac tagcagcacc aagttacatc
2581 cagatgtccc caccgacaag aacctaaagc cgaaccccaa ctggaatcaa gggaagactg
2641 ttgtcaaaag cgacaagctt gtctacgtag accttctccg agaagaacca gatgctaaaa
2701 ctgacacaaa cgtgtccaaa cccagctttg cagcagagag tgttggccag agcgctgagc
2761 cccccaagcc ctcagttgag ccggccctgc agcagcaccg tgatttcatc gccctgagag
2821 aggagttggg gcgcatcagt gacttccacg aaacttatac tttcaaacag ccagtcttca
2881 ccgtaagcaa ggacagtgtt ctggcaggta ccaacaaaga gaacctaggg ttgccagtct
2941 cgactccatt cctggagcca cctctgggga gcgatggccc tgctgtaact tttggtaaaa
3001 cccaagagga tcccaaacca ttttgtgtgg gcagtgcccc accaagtgtg gatgtgaccc
3061 ccacctatac caaagatgga gctgatgagg ctgaatcaaa tgatggcaaa gttctgaaac
3121 cgaagccatc taagctggca aagagaatcg ccaactcagc gggttacgtg ggtgaccgat
3181 tcaaatgtgt cactaccgaa ctgtatgcag attccagtca gctcagccgg gagcaacggg
3241 cattgcagat ggaaggatta caagaggaca gtattttatg tctacccgct gcttactgtg
3301 agcgtgcaat gatgcgcttc tcagagttgg agatgaaaga aagagaaggt ggccacccag
3361 caaccaaaga ctccgagatg tgcaaattca gcccagccga ctgggaaagg ttgaaaggaa
3421 atcaggacaa aaagccaaag tcggtcaccc tggaggaggc cattgcagaa cagaacgaaa
3481 gtgagagatg cgagtatagt gttggaaaca agcaccgtga tccctttgaa gccccagagg
3541 acaaagatct tcctgtggag aagtactttg tggagaggca gcctgtgagc gagcctcccg
3601 cagaccaggt ggcctcggac atgcctcaca gccccaccct ccgggtggac aggaaacgca
3661 aagtctcagg tgacagcagc cacactgaga ccactgcgga ggaggtgcca gaggaccctc
3721 tgctgaaagc caaacgccga cgagtctcta aagggctcca tcctaaaaaa caacgccact
3781 tgctgcacct tagagaacga tgggagcagc aggtgtcggc agcagatggc aaacctggcc
3841 ggcaaagcag gaaggaagtg acccaggcca ctcagcctga ggccattcct caggggacta
3901 acatcactga agagaaacct ggcaggaaaa gggcagaggc caaaggcaac agaagctggt
3961 cggaagagtc tcttaaaccc agtgacaatg aacaaggctt gcctgtgttc tccggctctc
4021 cgcccatgaa gagtctttca tccaccagtg caggcggcaa aaagcaggct cagccaagct
4081 gcgcaccagc ctccaggccg cctgccaaac agcagaaaat taaagaaaac cagaagacag
4141 atgtgctgtg tgcagacgaa gaagaggatt gccaggctgc ctccctgctg cagaaataca
4201 ccgacaacag cgagaagcca tccgggaaga gactgtgcaa aaccaaacac ttgatccctc
4261 aggagtccag gcggggattg ccactgacag gggaatacta cgtggagaat gccgatggca
4321 aggtgactgt ccggagattc agaaagcggc cggagcccag ttcggactat gatctgtcac
4381 cagccaagca ggagccaaag cccttcgacc gcttgcagca actgctacca gcctcccagt
4441 ccacacagct gccatgctca agttcccctc aggagaccac ccagtctcgc cctatgccgc
4501 cggaagcacg gagacttatt gtcaataaga acgctggcga gacccttctg cagcgggcag
4561 ccaggcttgg ctatgaggaa gtggtcctgt actgcttaga gaacaagatt tgtgatgtaa
4621 atcatcggga caacgcaggt tactgcgccc tgcatgaagc ttgtgctagg ggctggctca
4681 acattgtgcg acacctcctt gaatatggcg ctgatgtcaa ctgtagtgcc caggatggaa
4741 ccaggcctct gcacgatgct gttgagaacg atcacttgga aattgtccga ctacttctct
4801 cttatggtgc tgaccccacc ttggctacgt actcaggtag aaccatcatg aaaatgaccc
4861 acagtgaact tatggaaaag ttcttaacag attatttaaa tgacctccag ggtcgcaatg
4921 atgatgacgc cagtggcact tgggacttct atggcagctc tgtttgtgaa ccagatgatg
4981 aaagtggcta tgatgtttta gccaaccccc caggaccaga agaccaggat gatgatgacg
5041 atgcctatag cgatgtgttt gaatttgaat tttcagagac ccccctctta ccgtgttata
5101 acatccaagt atctgtggct caggggccac gaaactggct actgctttcg gatgtcctta
5161 agaaattgaa aatgtcctcc cgcatatttc gctgcaattt tccaaacgtg gaaattgtca
5221 ccattgcaga ggcagaattt tatcggcagg tttctgcaag tctcttgttc tcttgctcca
5281 aagacctgga agccttcaac cctgaaagta aggagctgtt agatctggtg gaattcacga
5341 acgaaattca gactctgctg ggctcctctg tagagtggct ccaccccagt gatctggcct
5401 cagacaacta ctggtgagca agctggaccc accatgtaca gtgtgttata gtgttaatcc
5461 ttgtgcatat gtgtcataat acaactattt ctgtaaagaa aggacactat tacatatgaa
5521 aatatctctt ctttatataa gagaaattac tccagtcaga aggacttaga aacatgtttt
5581 tttcctttta aacttttaag tcagttttta tgaagttgtt ataatgtttc tttacttttc
5641 aatgcacaca tgctttggga tacgtttgtt tttacttgga acatttgttt cttttctttt
5701 ttaaggag
//