LOCUS AF309034 3520 bp mRNA linear HUM 23-MAR-2001 DEFINITION Homo sapiens SOX6 mRNA, complete cds. ACCESSION AF309034 VERSION AF309034.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3520) AUTHORS Cohen-Barak,O., Hagiwara,N., Arlt,M.F., Horton,J.P. and Brilliant,M.H. TITLE Cloning, characterization and chromosome mapping of the human SOX6 gene JOURNAL Gene 265 (1-2), 157-164 (2001) PUBMED 11255018 REFERENCE 2 (bases 1 to 3520) AUTHORS Cohen-Barak,O., Hagiwara,N., Arlt,M.F., Horton,J.P. and Brilliant,M.H. TITLE Direct Submission JOURNAL Submitted (27-SEP-2000) Pediatrics, University of Arizona, 1501 N. Campbell Ave., Tucson, AZ 85724, USA FEATURES Location/Qualifiers source 1..3520 /db_xref="H-InvDB:HIT000076964" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="11" /map="11p15.2-11p15.3" /tissue_type="myoblast" CDS 62..2488 /note="transcription factor" /codon_start=1 /product="SOX6" /protein_id="AAK26115.1" /translation="MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLH PIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKP DEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKD WKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAAS QIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQ RTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHASHPQ INQRLKGLSDRFGRNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPP NTAGTVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPA SKTSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMRE QIQREQQQQQPHGVDGKLSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPG VIDLTRPEDAEGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFP DMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDG KKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTS DCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSE NEAPEAVSAN" BASE COUNT 1053 a 829 c 783 g 855 t ORIGIN 1 aaaggcaatt taccagtgat ttctgggtgc tggggctgat attttttgtg catatttaag 61 aatgtcttcc aagcaagcca cctctccatt tgcctgtgca gctgatggag aggatgcaat 121 gacccaggat ttaacctcaa gggaaaagga agagggcagt gatcaacatg tggcctccca 181 tctgcctctg caccccataa tgcacaacaa acctcactct gaggagctac caacacttgt 241 cagtaccatt caacaagatg ctgactggga cagcgttctg tcatctcagc aaagaatgga 301 atcagagaat aataagttat gttccctata ttccttccga aatacctcta cctcaccaca 361 taagcctgac gaagggagtc gggaccgtga gataatgacc agtgttactt ttggaacccc 421 agagcgccgc aaagggagtc ttgccgatgt ggtggacaca ctgaaacaga agaagcttga 481 ggaaatgact cggactgaac aagaggattc ctcctgcatg gaaaaactac tttcaaaaga 541 ttggaaggaa aaaatggaaa gactaaatac cagtgaactt cttggagaaa ttaaaggtac 601 acctgagagc ctggcagaaa aagaacggca gctctccacc atgattaccc agctgatcag 661 tttacgggag cagctactgg cagcgcatga tgaacagaaa aaactggcag cgtcacaaat 721 tgagaaacaa cggcagcaaa tggaccttgc tcgccaacag caagaacaga ttgcgagaca 781 acagcagcaa cttctgcaac agcagcacaa aattaatctc ctgcagcaac agatccaggt 841 tcagggtcac atgcctccgc tcatgatccc aatttttcca catgaccagc ggactctggc 901 agcagctgct gctgcccaac agggattcct cttcccccct ggaataacat acaaaccagg 961 tgataactac cccgtacagt tcattccatc aacaatggca gctgctgctg cttctggact 1021 cagcccttta cagctccaga agggtcatgc ctcccaccca caaattaacc aaaggctaaa 1081 gggcctaagt gaccgttttg gcaggaattt ggacaccttt gaacatggtg gtggccactc 1141 ttacaaccac aaacagattg agcagctcta tgccgctcag ctggccagca tgcaggtgtc 1201 acctggagca aagatgccat caactccaca gccaccaaac acagcaggga cggtctcacc 1261 tactgggata aaaaatgaaa agagagggac cagccctgta actcaagtta aggatgaagc 1321 agcagcacag cctctgaatc tctcatcccg acccaagaca gcagagcctg taaagtcccc 1381 aacgtctccc acccagaacc tcttcccagc cagcaaaacc agccctgtca atctgccaaa 1441 caaaagcagc atccctagcc ccattggagg aagcctggga agaggatcct ctttagatat 1501 cctatctagt ctcaactccc ctgccctttt tggggatcag gatacagtga tgaaagccat 1561 tcaggaggcg cggaagatgc gagagcagat ccagcgggag caacagcagc aacagccaca 1621 tggtgttgac gggaaactgt cctccataaa taatatgggg ctgaacagct gcaggaatga 1681 aaaggaaaga acgcgctttg agaatttggg gccccagtta acgggaaagt caaatgaaga 1741 tggaaaactg ggcccaggtg tcatcgacct tactcggcca gaagatgcag agggaggtgc 1801 cactgtggct gaagcacgag tctacaggga cgcccgcggc cgtgccagca gcgagccaca 1861 cattaagcga ccaatgaatg cattcatggt ttgggcaaag gatgagagga gaaaaatcct 1921 tcaggccttc cccgacatgc ataactccaa cattagcaaa atcttaggat ctcgctggaa 1981 atcaatgtcc aaccaggaga agcaacctta ttatgaagag caggcccggc taagcaagat 2041 ccacttagag aagtacccaa actataaata caaaccccga ccgaaacgca cctgcattgt 2101 tgatggcaaa aagcttcgga ttggggagta taagcaactg atgaggtctc ggagacagga 2161 gatgaggcag ttctttactg tggggcaaca gcctcagatt ccaatcacca caggaacagg 2221 tgttgtgtat cctggtgcta tcactatggc aactaccaca ccatcgcctc agatgacatc 2281 tgactgctct agcacctcgg ccagcccgga gcccagcctc ccggtcatcc agagcactta 2341 tggtatgaag acagatggcg gaagcctagc tggaaatgaa atgatcaatg gagaggatga 2401 aatggaaatg tatgatgact atgaagatga ccccaaatca gactatagca gtgaaaatga 2461 agccccggag gctgtcagtg ccaactgagg agtttttgtt tgctgaatta aagtactctg 2521 acatttcacc cccctcccca acaaagagtt attaaagagc ccgcatgcat ttgtggctcc 2581 acaactacat cagcagaatg gtcttaattg tttcgtaaag tgtgagacag attaagtttt 2641 ccctgatttt tcatgaactt gagttttttg ttgttattgt tattgttgtt gttgttgttt 2701 ttttaattta ggtgaagaca tattaaatat gagacaccag gacttgaaac ttatctcaac 2761 ccgtagatgt cttacaagtc ttatattttt gtcttacttt ttttttcttt tggatgttga 2821 taaaggttta agttactgtt ttagatgggg ttaaacattc tcactcaggt atgctgtgcc 2881 ggcctacagg ttgtgaatgt gtttttattc tgaattattt tagaaaacaa ctgaggattt 2941 catattgtga aacagaacaa gtccacggcg tgtgcagctg catgtagagc atattcaaaa 3001 ggcctcggaa ttccaatttt ccatttgtag agttaaactt tgaatgtgcc aaactttttc 3061 gtaacttttg aatcttaata ttttgaaagt cttaaaggag acactgcaaa gtcttagaca 3121 atctttggca tcttaaaata aaatagcaaa ccaacatttt tttttccaga aaatggtaag 3181 gtactcagga atctggagac aagatattgt aaggaacgaa caaggttgcc acagtgcatg 3241 gacccaattg tgtttgcctg ttgacgtgcc atcagtgcgt gatgtggtat gacatacaca 3301 caccagagca accgccacac cagatatcga cagagtggtc ttctctgcct gagaccacct 3361 ctcactacat ccattatccc tttgccttta accctgacat tcagtcttaa cacattttat 3421 cttaaataat ttattcattc cagaatgtca agggtccact tgctatttat tttttttcaa 3481 ttgttggtgg cattaattta ataattcttg tttttcaccg //