LOCUS AF294278 4376 bp mRNA linear HUM 21-NOV-2000 DEFINITION Homo sapiens PR-domain-containing protein 16 (PRDM16) mRNA, complete cds. ACCESSION AF294278 VERSION AF294278.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4376) AUTHORS Fang,W., Yang,X. and Huang,S. TITLE A family of novel PR-domain (PRDM) genes as candidate tumor suppressors JOURNAL Unpublished REFERENCE 2 (bases 1 to 4376) AUTHORS Fang,W., Yang,X.-h. and Huang,S. TITLE Direct Submission JOURNAL Submitted (07-AUG-2000) Oncogenes and Tumor Suppressor Genes, The Burnham Institute, 10901 N. Torrey Pines Road, La Jolla, CA 92037, USA FEATURES Location/Qualifiers source 1..4376 /db_xref="H-InvDB:HIT000076555" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="1" /map="1p36.23-p33" gene 1..4376 /gene="PRDM16" /gene_synonym="PFM13" /note="paralog of MDS1-EVI1 gene" CDS 64..3894 /gene="PRDM16" /gene_synonym="PFM13" /note="PRDM16; PFM13" /codon_start=1 /product="PR-domain-containing protein 16" /protein_id="AAG33382.1" /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMS PIPVGSPPPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKR KMEAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDA NQAGAGSWLKYIRVACSCDDQNLTMCQISEQVIYYKVIKDIEPGEELLVHVKEGVYPL GTVPPGLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGG GSGQAHECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNFIRHQMSHDS GKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTV KPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKN HYTPGGIFAPGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPYRPHPGSLPFSTAPPTF PALTPGFPGIFPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNS SQGTTAAAGPEEKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGS DLDSDVDSDPDKDKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQ LLTATGAAGDSIKAIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYP FTDRALAHNLLVKAEPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPAS GEEQPLDLSIGSRARASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHY AKPSPFFMDPIYRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAM KADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRT HTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKH EHENAPVSQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQA STRTEKRADMQIVDGSAQCPGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPA PEPQAAYEDEEDEEPAASLAVGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEE AFEVKDVLNSTLDSEALKHTLCRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTG ATSESGAFHPINHL" BASE COUNT 974 a 1428 c 1278 g 696 t ORIGIN 1 gaagatagtg tgtggctgct tctggactca aggaggagga gagagattcc gcgagccgac 61 accatgcgat ccaaggcgag ggcgaggaag ctagccaaaa gtgacggtga cgttgtaaat 121 aatatgtatg agcccaaccg ggacctgctg gccagccaca gcgcggagga cgaggccgag 181 gacagtgcca tgtcgcccat ccccgtgggg tcaccgcccc ccttccccac cagcgaggac 241 ttcaccccca aggagggctc gccgtacgag gcccctgtct acattcctga agacattccg 301 atcccagcag acttcgagct ccgagagtcc tccatcccag gggctggcct gggggtctgg 361 gccaagagga agatggaagc cggggagagg ctgggcccct gcgtggtggt gccccgggcg 421 gcggcaaagg agacagactt cggatgggag caaatactga cggacgtgga agtgtcgccc 481 caggaaggct gcatcacaaa gatctccgaa gacctgggca gtgagaagtt ctgcgtggat 541 gcaaatcagg cgggggctgg cagctggctc aagtacatcc gtgtggcgtg ctcctgcgat 601 gaccagaacc tcaccatgtg tcagatcagt gagcaggtaa tttactataa agtcattaag 661 gacattgagc caggtgagga gctgctggtg cacgtgaagg aaggcgtcta ccccctgggc 721 acagtgccgc ccggcctgga cgaggagccc acgttccgct gtgacgagtg tgacgaactc 781 ttccagtcca agctggacct gcggcgccat aagaagtaca cgtgtggctc agtgggggct 841 gcgctctacg agggcctggc tgaggagctc aagcccgagg gccttggcgg tggcagcggc 901 caagcccacg agtgcaagga ctgcgagcgg atgttcccca acaagtacag cctggagcag 961 cacatggtca tccacacgga ggagcgcgag tacaaatgcg accagtgtcc caaggccttc 1021 aactggaagt ccaacttcat ccgccaccag atgtcccacg acagcggcaa acgcttcgaa 1081 tgtgaaaact gcgtgaaggt gttcacggac cccagcaacc ttcagcggca catccgctcg 1141 cagcacgtgg gcgctcgggc ccacgcctgc cccgactgcg ggaagacctt cgccacgtcc 1201 tccggcctca agcagcacaa gcatatccac agcacggtga agcctttcat atgtgaggtc 1261 tgccacaagt cctacacgca gttctccaac ctgtgccggc acaagcggat gcacgccgac 1321 tgccgcacgc agatcaagtg caaggactgt ggccagatgt tcagcactac ctcctccctc 1381 aacaagcacc ggcgcttctg cgagggcaag aaccattaca cgccgggcgg catctttgcc 1441 ccgggcctgc ccttgacccc cagccccatg atggacaagg caaaaccctc ccccagcctc 1501 aatcacgcca gcctgggctt caacgagtac tttccctaca ggccgcaccc ggggagcctg 1561 cccttctcca cggcgcctcc cacgttcccc gcactcaccc ccggcttccc gggcatcttc 1621 cctccatcct tgtacccccg gccgcctctg ctacctccca catcgctgct caagagcccc 1681 ctgaaccaca cccaggacgc caagctcccc agtcccctgg ggaacccagc cctgcccctg 1741 gtctccgccg tcagcaacag cagccagggc acgacggcag ctgcggggcc cgaggagaag 1801 ttcgagagcc gcctggagga ctcctgtgtg gagaagctga agaccaggag cagcgacatg 1861 tcggacggca gtgactttga ggacgtcaac accaccacgg ggaccgacct ggacacgacc 1921 acggggacgg gctcggacct ggacagcgac gtggacagcg accctgacaa ggacaagggc 1981 aagggcaagt ccgccgaggg ccagcccaag tttgggggcg gcttggcgcc cccgggggcc 2041 ccgaacagcg tggccgaggt gcctgtcttc tattcccagc actcattctt cccgccaccc 2101 gacgagcagc tgctgactgc aacgggcgcc gccggggact ccatcaaggc catcgcatcc 2161 attgccgaga agtactttgg ccccggcttc atggggatgc aggagaagaa gctgggctcg 2221 ctcccctacc actcggcgtt ccccttccag ttcctgccca acttccccca ctccctttac 2281 cccttcacgg accgagccct cgcccacaac ttgctggtca aggccgagcc aaagtcaccc 2341 cgggacgccc tcaaggtggg cggccccagt gccgagtgcc cctttgatct caccaccaag 2401 cccaaagacg tgaagcccat cctgcccatg cccaagggcc cctcggcccc cgcatccggc 2461 gaggagcagc cgctggacct gagcatcggc agccgggccc gtgccagcca aaacggcggc 2521 gggcgggagc cccgcaagaa ccacgtctat ggggaacgca agctgggcgc cggcgagggg 2581 ctgccccagg tgtgcccggc gcggatgccc cagcagcccc cgctccacta cgccaagccc 2641 tcgcccttct tcatggaccc catctacagg gtagaaaagc ggaaggtcac agaccccgtg 2701 ggagccctga aggagaagta cctgcggccg tccccgctgc tcttccaccc ccagatgtca 2761 gccatagaga ccatgacaga gaagctggag agctttgcag ccatgaaggc ggactcgggc 2821 agctccctgc agcccctccc ccaccacccc ttcaacttcc ggtccccacc cccaacgctc 2881 tccgacccca tcctcaggaa gggcaaggag cgatacacgt gcaggtactg tgggaagatc 2941 ttccccagat cagccaatct caccagacac ctgaggacgc acactgggga gcagccgtac 3001 aggtgtaagt actgcgaccg ctccttcagc atctcttcga acctccagcg gcacgtccgg 3061 aacatccaca acaaggagaa gcctttcaag tgccacctgt gcaaccgctg cttcgggcag 3121 cagaccaacc tggaccggca cctcaagaag cacgagcacg agaacgcacc agtgagccag 3181 caccccgggg tcctcacgaa ccacctgggg accagcgcgt cctctcccac ctcagagtcg 3241 gacaaccacg cacttttaga cgagaaagaa gactcttatt tctcggaaat cagaaacttt 3301 attgccaata gtgagatgaa ccaagcatca acgcgaacag agaaacgggc ggacatgcag 3361 atcgtggacg gcagtgccca gtgtccaggc ctagccagtg agaagcagga ggacgtggag 3421 gaggaggacg acgatgacct ggaggaggac gatgaggaca gcctggccgg gaagtcgcag 3481 gatgacaccg tgtcccccgc acccgagccc caggccgcct acgaggatga ggaggatgag 3541 gagccagccg cctccctggc cgtgggcttt gaccacaccc gaaggtgtgc tgaggaccac 3601 gaaggcggtc tgttagcttt ggagccgatg ccgacttttg ggaaggggct ggacctccgc 3661 agagcagctg aggaagcatt tgaagttaaa gatgtgctta attccacctt agattctgag 3721 gctttaaaac atacactgtg caggcaggct aagaaccagg catatgcaat gatgctgtcc 3781 ctttccgaag acactcctct ccacaccccc tcccagggtt ctctggacgc ttggttgaag 3841 gtcactggag ccacgtcgga gtctggagca tttcacccca tcaaccacct ctgacgggct 3901 gggcagccgg gggccggtgg ccagagcgag ggcaccagcc acgaaggacg gaggcgggcg 3961 gggccccgga gaaccctgtc cctgcgtgtg gccactcctc agcatcctcc ccacccacca 4021 tggttcattc cgacttttcc aatggaaact cagatcccaa aagtccctaa agcagtcgta 4081 gagtctcacc atctccaagg attggtcttg agaacactgt tcagtgacgg ccatgcaggt 4141 ggccgtccaa agacagccaa cggagctgcc tcgcagaatc agccagtggg caggtggacg 4201 ctctgctgag acagaagctg gtggccactg ccgggtgccc gcgtggggtc gcggaaggga 4261 atggatagac tggtgtgctc aaaagagaga gatcactcaa atgattttta taatgaaatg 4321 acaagaataa cccttttggt aaccgtattg actgcagagt ctatttaagc atgtgg //