LOCUS AF278605 1641 bp mRNA linear HUM 03-JUN-2005
DEFINITION Homo sapiens pTM5 mariner-like transposon mRNA, partial sequence.
ACCESSION AF278605
VERSION AF278605.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1641)
AUTHORS Liehr,T., Reiter,L.T., Lupski,J.R., Murakami,T., Claussen,U. and
Rautenstrauss,B.
TITLE Regional localization of 10 mariner transposon-like ESTs by means
of FISH--evidence for a correlation with fragile sites
JOURNAL Mamm. Genome 12 (4), 326-328 (2001)
PUBMED 11309667
REFERENCE 2 (bases 1 to 1641)
AUTHORS Murakami,T. and Lupski,J.R.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2000) Molecular and Human Genetics, Baylor
College of Medicine, Room 609E, One Baylor Plaza, Houston, TX
77030, USA
FEATURES Location/Qualifiers
source 1..1641
/db_xref="H-InvDB:HIT000076026"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="pTM5"
/tissue_type="testis"
misc_feature 1..1641
/note="contains mutated, non-functional transposase coding
region; isolated using a pLR1.8 probe containing the MITE
in the CMT1A-REP"
mobile_element <1..>1641
/mobile_element_type="transposon:mariner-like transposon"
BASE COUNT 592 a 272 c 305 g 472 t
ORIGIN
1 aaatgatata atcttttcag cacctgatat tcttaaagat ccagggttta caaatgactg
61 ttagatatgc caaggatgac tagcctataa cttaaggatc tgttcaggaa cagtagaaaa
121 gaaggtgata ggaaactggg aatcttaaat ctaatactag ttctgtcatg aattaggctt
181 gttattgtag ttgtttctca aatttaagaa aatatgaggg gtcttgaaaa agtgcatgga
241 aaatgcatat catgaaaaaa ctatgcatgg atttcaaaat ttttggacca aaataaactc
301 ctactaactt gttataacat gtctgaacag gatctagttt gaagcactaa gaagaataag
361 acatcagttt gaaaagaggc tctatcagaa caacacgaat tctgctaaaa ttgaagcaag
421 aacaaacatc aaatatatgt tgacacttgg gtggaagaat ggtgaactaa ttgatgcttt
481 atgaaaagtt gatagggaca gtgctccaaa gaaatcagtt tacaaatgga taactcgttt
541 taagaaggca taaggtaatg ttgaagaaga agcccacagt ggcagatcat ccacatcagt
601 ttgtgagaaa aaagttagtt catggcgtaa ttgaagaaaa ccaacaatta acagcagaaa
661 caacagccaa caccatagac atctcagttg gttcacctta cacaattttg actggaaaag
721 ttcagcaaac tttatacctg ataggtacca aaaccattgc acccagatca gctacagaca
781 agaatagagc tttcaatgga aattttaaat aagtgggatc aggatcttga agcctttcat
841 tgaaaaattg taacaggaga tgaaacatgg ctttaccagc gcaatcctga agacaaaaca
901 caaagcagtg gttaccaaga taagtagttc agttaaagca caagaggact ggttgagagc
961 aaaggtcatg gcaacagctt ttgaatgctc aaggcatttt gcttgttgac tttctgtagg
1021 gccaaagaat ggtaacgtgc ttatcatggg agtgttttga gaaacttagc caaagcttca
1081 gcagaaaaat ccccgagaaa gaccagagag ttcttcacca caacaatgtt cctgctcatc
1141 cctctcatca aacaaggcca ttttgcaaga gttttgatgg gaaatcacta ggcatccacc
1201 ctacagtcct ggtttggcac cttctgactt tttgtttcct aatcttaaaa aaatttttca
1261 gggcagtaca tttttctcaa gttaatgtat aaagaaactg cattgatgta gataaattcc
1321 cagaactctc agttctttag ggatggacta aatagctggt atcatcactt acaaaagtgt
1381 cttgaatgct atagagctaa tgttcaaaaa tatagtttat attttttatc ttttaaccat
1441 ttttccacaa actttttgaa gtctccttga atatgtacca tttataaagg ggaaaaattc
1501 tgtgactact catgttgact taatgctgac ttaattttct gttttgtaaa tatatacaaa
1561 caagttgata caaattttgt ttatagccct taaacaaatt tgtgaaataa atgcattcag
1621 aaacaaaaaa aaaaaaaaag g
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