LOCUS AF276242 1956 bp mRNA linear HUM 08-NOV-2000
DEFINITION Homo sapiens mu-protocadherin related protein splice variant mRNA,
complete cds.
ACCESSION AF276242
VERSION AF276242.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1956)
AUTHORS Soleiman,A., Krieger,S., Haase,A. and Hantusch,B.
TITLE Cloning and characterization of human mu-protocadherin
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1956)
AUTHORS Krieger,S., Hantusch,B., Ullrich,R. and Soleiman,A.
TITLE Direct Submission
JOURNAL Submitted (08-JUN-2000) Dept of Clinical Pathology, University of
Vienna/Vienna General Hospital, Waehringer Guertel 18-20, Vienna
A-1090, Austria
FEATURES Location/Qualifiers
source 1..1956
/db_xref="H-InvDB:HIT000075952"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="11"
/tissue_type="kidney"
CDS 1..1956
/note="clathrin coated pits integral type 1 membrane
protein; similar to Rattus norvegicus mu-protocadherin;
this splice variant lacks the mucin type glycosylated
domain"
/codon_start=1
/product="mu-protocadherin related protein splice variant"
/protein_id="AAG30821.1"
/translation="MGSWALLWPPLLFTGLLVRPPGTMAQAQYCSVNKDIFEVEENTN
VTEPLVDIHVPEGQEVTLGALSTPFAFRIQGNQLFLNVTPDYEEKSLLEAQLLCQSGG
TLVTQLRVFVSVLDVNDNAPEFPFKTKEIRVEEDTKVNSTVIPETQLQAEDRDKDDIL
FYTLQEMTAGASDYFSLVSVNRPALRLDRPLDFYERPNMTFWLLVRDTPGENVEPSHT
ATATLVLNVVPADLRPPWFLPCTFSDGYVCIQAQYHGAVPTGHILPSPLVLRPGPIYA
EDGDRGINQPIIYSIFRGNVNGTFIIHPDSGNLTVARSVPSPMTFLLLVKGQQADLAR
YSVTQVTVEAVAAAGSPPRFPQSLYRGTVARGAGAGVVVKDAAAPSQPLRIQAQDPEF
SDLNSAITYRITNHSHFRMEGEVVLTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQ
VSEQEPPSTGGGPSEDKRFSVVDMAALGGVLGALLLLALLGLAVLVHKHYGPRLKCCS
GKAPEPQPQGFDNQAFLPDHKANWAPVPSPTHDPKPAEAPMPAEPAPPGPASPGGAPE
PPAAARAGGSPTAVRSILTKERRPEGGYKAVWFGEDIGTEADVVVLSAPTLDVDGASD
SGSGDEGEGAGRGGGPYDAPGGDDSYI"
BASE COUNT 368 a 659 c 590 g 339 t
ORIGIN
1 atggggtctt gggccctgct gtggcctccc ctgctgttca ccgggctgct cgtccgaccc
61 ccggggacca tggcccaggc ccagtactgc tctgtgaaca aggacatctt tgaagtagag
121 gagaacacaa atgtcaccga gccgctggtg gacatccacg tcccggaggg ccaggaggtg
181 accctcggag ccttgtccac cccctttgca tttcggatcc agggaaacca gctgtttctc
241 aacgtgactc ctgattacga ggagaagtca ctgcttgagg ctcagctgct gtgtcagagc
301 ggaggcacat tggtgaccca gctaagggtg ttcgtgtcag tgctggacgt caatgacaat
361 gcccccgaat tcccctttaa gaccaaggag ataagggtgg aggaggacac gaaagtgaac
421 tccaccgtca tccccgagac gcaactgcag gctgaggacc gcgacaagga cgacattctg
481 ttctacaccc tccaggaaat gacagcaggt gccagtgact acttctccct ggtgagtgta
541 aaccgtcccg ccctgaggct ggaccggccc ctggacttct acgagcggcc gaacatgacc
601 ttctggctgc tggtgcggga cactccgggg gagaatgtgg aacccagcca cactgccacc
661 gccacactag tgctgaacgt ggtgcccgcc gacctgcggc ccccgtggtt cctgccctgc
721 accttctcag atggctacgt ctgcattcaa gctcagtacc acggggctgt ccccacgggg
781 cacatactgc catctcccct cgtcctgcgt cccggaccca tctacgctga ggacggagac
841 cgcggcatca accagcccat catctacagc atctttaggg gaaacgtgaa tggtacattc
901 atcatccacc cagactcggg caacctcacc gtggccagga gtgtccccag ccccatgacc
961 ttccttctgc tggtgaaggg ccaacaggcc gaccttgccc gctactcagt gacccaggtc
1021 accgtggagg ctgtggctgc ggccgggagc ccgccccgct tcccccagag cctgtatcgt
1081 ggcaccgtgg cgcgtggcgc tggagcgggc gttgtggtca aggatgcagc tgccccttct
1141 cagcctctga ggatccaggc tcaggacccg gagttctcgg acctcaactc ggccatcaca
1201 tatcgaatta ccaaccactc acacttccgg atggagggag aggttgtgct gaccaccacc
1261 acactggcac aggcgggagc cttctacgca gaggttgagg cccacaacac ggtgacctct
1321 ggcaccgcaa ccacagtcat tgagatacaa gtttccgaac aggagccccc ctccacaggt
1381 ggcggcccct cggaggacaa gcgcttctcg gtggtggata tggcggccct gggcggggtg
1441 ctgggtgcgc tgctgctgct ggctctcctt ggcctcgccg tccttgtcca caagcactat
1501 ggcccccggc tcaagtgctg ctctggcaaa gctccggagc cccagcccca aggctttgac
1561 aaccaggcgt tcctccctga ccacaaggcc aactgggcgc ccgtccccag ccccacgcac
1621 gaccccaagc ccgcggaggc accgatgccc gcagagcccg caccccccgg ccctgcctcc
1681 ccaggcggtg cccctgagcc ccccgcagcg gcccgagctg gcggaagccc cacggcggtg
1741 aggtccatcc tgaccaagga gcggcggcca gagggcgggt acaaggctgt ctggtttggc
1801 gaggacatcg ggacggaggc agacgtggtc gttctcagcg cgcccaccct ggacgtggat
1861 ggcgccagtg actccggcag cggcgatgag ggcgagggcg cggggagggg tgggggtccc
1921 tacgatgcgc ccggtggtga tgactcctac atctaa
//