LOCUS AF273048 5629 bp mRNA linear HUM 17-JAN-2001
DEFINITION Homo sapiens CTCL tumor antigen se20-9 mRNA, complete cds.
ACCESSION AF273048
VERSION AF273048.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5629)
AUTHORS Eichmuller,S., Usener,D., Dummer,R., Stein,A., Thiel,D. and
Schadendorf,D.
TITLE Serological detection of cutaneous T-cell lymphoma-associated
antigens
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 98 (2), 629-634 (2001)
PUBMED 11149944
REFERENCE 2 (bases 1 to 5629)
AUTHORS Eichmuller,S., Usener,D., Delius,H. and Schadendorf,D.
TITLE Direct Submission
JOURNAL Submitted (31-MAY-2000) D0900, German Cancer Research Center, Im
Neuenheimer Feld 280, 69120 Heidelberg, Germany
FEATURES Location/Qualifiers
source 1..5629
/db_xref="H-InvDB:HIT000075860"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="testis"
/note="identified by a SEREX approach screening a testis
cDNA library using sera from CTCL patients"
misc_feature 1..5629
/note="sequence similar to KIAA0204in Accession Number
D86959 and to partial sequence of chromosome 10 in
Accession Number AL138761"
CDS 35..3742
/codon_start=1
/product="CTCL tumor antigen se20-9"
/protein_id="AAG34908.1"
/translation="MSFFNFRKIFKLGSEKKKKQYEHVKRDLNPEDFWEIIGELGDGA
FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN
NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGN
ILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV
WSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN
VDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTEEVEDGKEEDEEEETENSLPIP
ASKRASSDLSIASSEEDKLSQNACILESVSEKTERSNSEDKLNSKILNEKPTTDEPEK
AVEDINEHITDAQLEAMTELHDRTAVIKENEREKRPKLENLPDTEDQETVDINSVSEG
KENNIMITLETNIEHNLKSEEEKDQEKQQMFENKLIKSEEIKDTILQTVDLVSQETGE
KEANIQAVDSEVGLTKEDTQEKLGEDDKTQKDVISNTSDVIGTCEAADVAQKVDEDSA
EDTQSNDGKEVVEVGQKLINKPMVGPEAGGTKEVPIKEIVEMNEIEEGKNKEQAINSS
ENIMDINEEPGTTEGEEITESSSTEEMEVRSVVADTDQKALGSEVQDASKVTTQIDKE
KKEIPVSIKKEPEVTVVSQPTEPQPVLIPSININSDSGENKEEIGSLSKTETILPPES
ENPKENDNDSGTGSTADTSSIDLNLSISSFLSKTKDSGSISLQETRRQKKTLKKTRKF
IVDGVEVSVTTSKIVTDSDSKTEELRFLRRQELRELRFLQKEEQRAQQQLNSKLQQQR
EQIFRRFEQEMMSKKRQYDQEIENLEKQQKQTIERLEQEHTNRLRDEAKRIKGEQEKE
LSKFQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELD
GSLKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ
YFMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARLPKIQRSEAKTRMAMFKK
SLRINSTATPDQDRDKIKQFAAQEEKRQKNERMAQHQKHENQMRDLQLQCEANVRELH
QLQNEKCHLLVEHETQKLKELDEEHSQELKEWREKLRPRKKTLEEEFARKLQEQEVFF
KMTGESECLNPSTQSRISKFYPIPSLHSTGS"
BASE COUNT 2030 a 905 c 1181 g 1513 t
ORIGIN
1 cttaagtgca aggaactctg tgttgggagg aaaaatgtcc ttcttcaatt tccgtaagat
61 cttcaagttg gggagcgaga agaagaagaa gcagtacgaa cacgtgaaga gggacctgaa
121 ccccgaagac ttttgggaga ttataggaga actgggcgac ggagcctttg ggaaagtgta
181 caaggcccag aataaagaga ccagtgtttt agctgctgca aaagtgattg acactaaatc
241 tgaagaagaa cttgaagatt acatggtaga gattgacata ttagcatctt gtgatcaccc
301 aaatatagtc aagcttctag atgccttcta ttatgagaac aatctttgga tcctcattga
361 attttgtgca ggtggagcag tagatgctgt gatgcttgaa cttgagagac cattaactga
421 gtcccaaata caagtagttt gcaagcagac tttagatgca ttgaactact tacatgataa
481 taagatcatc cacagagatc tgaaggctgg caacattctc tttaccttag atggagatat
541 caaattggcg gattttggag tatcagctaa aaacacgagg acaattcaaa gaagagattc
601 ctttattggt acaccatatt ggatggctcc tgaagtagtc atgtgtgaaa catctaagga
661 cagaccctat gactacaaag ctgatgtttg gtccctgggt atcactttaa tagaaatggc
721 tgagatagaa ccacctcatc atgaattaaa tccaatgcga gtgctgctaa aaatagcaaa
781 atctgagcca cctacattag cacagccatc cagatggtct tcaaatttta aggactttct
841 aaagaaatgc ttagaaaaga atgtggatgc caggtggact acatctcagc tgctgcagca
901 tccctttgtt actgttgatt ccaacaaacc catccgagaa ttgattgcag aggcgaaggc
961 tgaagtaaca gaagaagttg aagatggcaa agaggaagat gaagaggagg aaacagaaaa
1021 ttctctgcca atacctgcaa gtaagcgtgc atcttctgac cttagtatcg ccagctctga
1081 agaagataaa ctttcacaaa atgcttgtat tttggagtct gtctcagaaa aaacagaacg
1141 tagtaactct gaagataaac tcaacagcaa aattcttaat gaaaaaccca ccactgatga
1201 acctgaaaag gctgtggagg atattaatga acatattacc gatgctcagt tagaagcaat
1261 gactgaactc catgacagaa cagcagtaat caaggagaat gaaagagaga agaggcccaa
1321 gcttgaaaat ctgcctgaca cagaagacca agaaactgtg gacattaatt cagtcagtga
1381 aggaaaagag aataatataa tgataacctt agaaacaaat attgaacata atctaaaatc
1441 tgaggaagaa aaggatcagg aaaagcaaca gatgtttgaa aataagctta taaaatctga
1501 agaaattaaa gatactattt tgcaaacagt agatttagtt tctcaagaga ctggagaaaa
1561 agaggcaaat attcaggcag ttgatagtga agttgggctt acaaaggaag acacccaaga
1621 gaaattgggg gaagacgaca aaactcaaaa agatgtgatc agcaatacaa gtgatgtgat
1681 aggaacatgt gaggcagcag atgtggctca gaaagtggat gaagacagtg ctgaggatac
1741 gcagagtaat gatgggaaag aagtggtcga agtaggccag aaattaatta ataagcccat
1801 ggtgggtcct gaggctggtg gtactaagga agttcctatt aaagaaatag ttgaaatgaa
1861 tgaaatagaa gaaggtaaaa ataaggaaca agcaataaac agttcagaga acataatgga
1921 catcaatgag gaaccaggaa caactgaagg tgaagaaatc actgagtcaa gtagcactga
1981 agaaatggag gtcagaagtg tggtggctga tactgaccaa aaggctttag gaagtgaagt
2041 tcaggatgct tctaaagtca ctactcagat agataaagag aaaaaagaaa ttccagtgtc
2101 aattaaaaaa gagcctgaag ttactgtagt ttcacagccc actgaacctc agcctgttct
2161 aatacccagt attaatatca actctgacag tggagaaaat aaagaagaaa taggttcttt
2221 atcaaaaact gaaactattc tgccaccaga atctgagaat ccaaaggaaa atgataatga
2281 ttcaggcact ggttccactg ctgatactag cagtattgac ttgaatttat ccatctctag
2341 ctttctaagt aaaactaaag acagtggatc gatatcttta caagaaacaa gaagacaaaa
2401 gaaaacattg aagaaaacac gcaaatttat tgttgatggt gtagaagtga gtgtaacaac
2461 atcaaagata gttacagata gtgattccaa aactgaagaa ttgcggtttc ttagacgtca
2521 ggaacttcgg gaattaagat ttcttcagaa agaagagcaa agagcccaac aacagctcaa
2581 tagcaaacta cagcaacaac gagaacaaat tttccggcgc tttgagcagg aaatgatgag
2641 taaaaagcga caatatgacc aggaaattga gaatctagaa aaacagcaga aacagactat
2701 cgaacgcctg gaacaagagc acacaaatcg cttgcgagat gaagccaaac gcatcaaagg
2761 agaacaagag aaagagttgt ccaaatttca gaatatgctg aagaaccgaa agaaggaggt
2821 tataaatgaa gtggagaaag cacccaaaga gctgagaaaa gagctcatga aacgcaggaa
2881 agaggagctt gcacaaagcc agcatgctca ggaacaagag tttgttcaga aacaacagca
2941 agaattagat ggctctctga aaaagatcat ccagcagcag aaggcagagt tagctaatat
3001 tgagagagag tgcctgaata acaagcaaca gctcatgaga gctcgagaag ctgcaatttg
3061 ggagctcgaa gaacgacact tacaagaaaa acaccagctg ctcaaacagc agcttaaaga
3121 tcagtatttc atgcaaagac atcagctact taagcgccac gagaaggaaa cagagcaaat
3181 gcagcgttac aatcaaagac ttattgagga attgaaaaac agacagactc aagaaagagc
3241 aagactgccc aagattcagc gcagtgaagc caagactcga atggccatgt ttaagaagag
3301 tttgagaatt aactcaacag ccacaccaga tcaggaccgt gataaaatta aacagtttgc
3361 tgcacaagaa gaaaagaggc agaaaaatga gagaatggct cagcatcaga aacatgagaa
3421 tcaaatgcga gatcttcagt tgcagtgtga agccaatgtc cgcgaactgc atcagctgca
3481 gaatgaaaaa tgccacttgt tggttgagca tgagactcag aaactgaagg agttagatga
3541 ggaacatagc caagaattaa aggagtggag agagaaattg agacctagga aaaagacact
3601 ggaagaagag tttgccagga aactacagga acaggaagta ttctttaaaa tgactgggga
3661 gtctgaatgc cttaacccat caacacagag ccggatttcc aaattttatc ctattcccag
3721 cttgcattcc accggatcat aacaaaggga agcattctgt gcgtgggttt ggctctttca
3781 gtatgtcatt ctgttctcat cttctgccac agtctctcag atagctcatg aagacaatca
3841 cctgcctcac cttctaggtg ttttcctttt ttgttttttt tgttttgttt tgtttttaag
3901 caaagatgaa gggaaaacga actaagacag acgctaggcc atgttggcaa agtagcatct
3961 tggtgactaa ggtgactttg tatattcatc ttaaaaatta tgttctttag acactgctac
4021 ctgaaaactg ttggagaaat aatgtttaaa gttatttaag aaaaactgtt acatcactaa
4081 gtattaataa attcttctta cctgacgtaa cttctcaatg cctaaattct gtagttgaag
4141 ctctgctgca gagagttggg ataattttct tttggtggat cagctctcat aaaaaagcta
4201 tgatttgctc aaatatgctg ttgactcagt aaatgaatat atttttttct ttaaatagga
4261 acaacctctt ttaaaagaga aaaattattt cagtgatttg tcaaaacgaa ttacctcttt
4321 tggcatgagc taataattga gggtgctaat tttcttaaga tagtgcctaa aacactaaat
4381 ttcagtcaag tcgtaagtag gattttcttt ttgatcaaca gggacaaaaa catctttaga
4441 attaaaaaca tggttgtttt ggaatttttg cttctcttac cgtttgatag aaattttcat
4501 cctaaaatac atgtacaaag tttggaaaga tgaaaaaaag aggtagcttt tagattgcaa
4561 attggaaatg taaaactcat gaaatttaag caatataggt ttagctatct gtgtttattt
4621 tctaaaataa tacctgagct ggttaaatga tttctctcca tcttagctaa ttctgtttaa
4681 aactctgtca gaggcctgca ggctgtgagt tatatttata aatatatctt cagaaattaa
4741 tcttaaaaga ggcattagtt cagaatactt ttttaaaagt ttaaattaaa tatttaggca
4801 cgtcagaaat tacttttcct tattttgaaa tgaggctact tatgtcttgg ttttattttg
4861 ttccatgttt aaatcattca ctttgatttg agtgggaaaa gcctgaagcc tttatcatgt
4921 ggttgctggt gtgtgtaatt attaatgaaa tgttcactcc tagtccctta tgaggcttag
4981 aatttcaacc acgtgtcagg tcagacagta ttataaactg tactttgctg tctgagacag
5041 cacatttgtg aatgatgctt gctgcctgcc attttcaacc tattctctct taagagtgct
5101 aggtaccaaa ttgtgaaagt ttgttttcag ttatattact tttgaggctg gtgaaaaatt
5161 taaatgtaac tttgtgggaa cactgattca tatttagaaa atgtaaatgt ctgtagcact
5221 ttcttgcagt taatttgaaa actttggatg ctgaaccttg tttgtcagtg atttagatga
5281 tttaaaaatg catgtgtgat ttgaatttta taattgtttt gacaagcata atttacttgg
5341 acaacttcgt aggtagcctt aacttctggc caagtttgtt ttttatataa atatatatac
5401 atatatacat attatgtatg gttgtaaatt catacactta tcacatgaat gtgttactgt
5461 atacaaaact cttaatgctt tattctcaaa tgctgggttg aaaaatgttt tgaaagcctt
5521 ttaaaatata tatctttata aagtaatatt caggatgatg ataaaaattg tttatattgt
5581 tatgataaaa atgacagtat aatgttaaaa aaaaaaaaaa aaaaaaaaa
//