LOCUS AF272148 2015 bp mRNA linear HUM 21-JUN-2000
DEFINITION Homo sapiens KRAB zinc finger protein (RITA) mRNA, complete cds.
ACCESSION AF272148
VERSION AF272148.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2015)
AUTHORS Rippe,V., Belge,G., Meiboom,M., Kazmierczak,B., Fusco,A. and
Bullerdiek,J.
TITLE A KRAB zinc finger protein gene is the potential target of 19q13
translocation in benign thyroid tumors
JOURNAL Genes Chromosomes Cancer 26 (3), 229-236 (1999)
PUBMED 10502321
REFERENCE 2 (bases 1 to 2015)
AUTHORS Rippe,V., Meiboom,M. and Bullerdiek,J.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2000) Center for Human Genetics and Genetic
Counseling, University of Bremen, Loebener Strasse 2, Bremen 28359,
Germany
FEATURES Location/Qualifiers
source 1..2015
/db_xref="H-InvDB:HIT000075798"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="19"
/map="19q13.4"
gene 1..2015
/gene="RITA"
/note="corresponds to exons 1 through 5"
5'UTR 1..186
/gene="RITA"
CDS 187..1578
/gene="RITA"
/note="Krueppel-type zinc finger protein"
/codon_start=1
/product="KRAB zinc finger protein"
/protein_id="AAF78075.1"
/translation="MAQGLVTFADVAIDFSQEEWACLNSAQRDLYWDVMLENYSNLVS
LDLESAYENKSLPTEKNIHEIRASKRNSDRRSKSLGRNWICEGTLERPQRSRGRYVNQ
MIINYVKRPATREGTPPRTHQRHHKENSFECKDCGKAFSRGYQLSQHQKIHTGEKPYE
CKECKKAFRWGNQLTQHQKIHTGEKPYECKDCGKAFRWGSSLVIHKRIHTGEKPYECK
DCGKAFRRGDELTQHQRFHTGEKDYECKDCGKTFSRVYKLIQHKRIHSGEKPYECKDC
GKAFICGSSLIQHKRIHTGEKPYECQECGKAFTRVNYLTQHQKIHTGEKPHECKECGK
AFRWGSSLVKHERIHTGEKPYKCTECGKAFNCGYHLTQHERIHTGETPYKCKECGKAF
IYGSSLVKHERIHTGVKPYGCTECGKSFSHGHQLTQHQKTHSGAKSYECKECGKACNH
LNHLREHQRIHNS"
misc_feature 196..321
/gene="RITA"
/note="Region: KRAB A domain"
misc_feature 577..1575
/gene="RITA"
/note="Region: zinc finger domain"
3'UTR 1579..2015
/gene="RITA"
regulatory 1685..1690
/regulatory_class="polyA_signal_sequence"
/gene="RITA"
BASE COUNT 601 a 444 c 503 g 467 t
ORIGIN
1 cgcttctgca ccggtgacgc aaccgctgtg tctccgccag tccgcgcagg ccagcatcct
61 tcagaaaaag catccccgag gaggaagacg aatcgttaaa catcttaggt cagctctagc
121 ctctcggaat ttgtcttctt cagtggaaac cccgagaaga ctgatcagtt cttcagttct
181 aaaacaatgg cccagggttt ggtgacgttc gccgacgtag ccatagactt ttctcaggag
241 gagtgggcct gtctgaactc tgctcagagg gacctgtact gggacgtgat gctggagaac
301 tacagtaact tggtctcact ggatttggag tcagcatatg aaaataagag tttacctaca
361 gaaaaaaaca ttcatgaaat aagggcttcc aaaaggaatt cagatagaag aagtaaatcc
421 cttggccgta actggatatg tgaaggtacg cttgaaagac cacagcgctc cagagggagg
481 tatgtcaatc agatgatcat caattatgtc aaaaggcctg ctactagaga aggcacccct
541 cctagaacac atcagagaca tcataaggag aattcctttg aatgtaagga ctgtgggaag
601 gcctttagtc gtggctatca acttagtcaa catcagaaaa tccatactgg tgagaaacct
661 tatgaatgta aagaatgtaa gaaggccttc cgttggggca atcagcttac tcaacatcaa
721 aaaattcata ctggggagaa gccctacgaa tgtaaagact gtgggaaggc ttttcgatgg
781 ggctcaagcc tcgttattca taagaggatt catactggtg aaaaacccta tgaatgtaaa
841 gactgtggaa aggcctttcg gcgtggtgat gagctcactc agcaccagag attccacact
901 ggggagaaag actacgaatg caaagactgt gggaagacct ttagccgtgt gtataaactt
961 attcagcaca agagaattca tagtggggag aagccttacg agtgtaaaga ctgtgggaag
1021 gcttttattt gtggttcaag cctcattcag cataaaagaa ttcacacagg tgagaaaccc
1081 tatgaatgtc aagaatgtgg gaaggccttt actcgagtca attaccttac tcagcatcag
1141 aagatccaca ccggtgagaa gcctcacgaa tgtaaggagt gtgggaaggc ctttcgctgg
1201 ggttcgagcc tcgttaagca cgagaggata catacgggcg agaagccgta caagtgcaca
1261 gaatgtggga aggccttcaa ttgtggctat cacctcactc agcacgagag aatccacaca
1321 ggcgaaaccc cgtataaatg taaggagtgt gggaaggctt tcatttatgg atcgagcctc
1381 gtgaaacatg agagaattca taccggggtg aaaccctatg ggtgtacaga atgtgggaag
1441 agctttagtc acggccatca gcttacacaa catcagaaaa cgcacagtgg ggcgaaatcc
1501 tacgaatgta aggagtgcgg gaaggcatgt aaccacctaa accatctccg agaacatcag
1561 aggatccaca acagttgaag agccttttga acgcagtagc ccgctcgtat ctatggtttc
1621 gctttccaca gtttgttacc tgcagtcaac tgcagttcaa aaatattaaa tggaaaattc
1681 cagaaataaa gaattttaag tctcaaatgg tgtgcccttc tgagtagcgt gatgaaatct
1741 ctcgctgtcc ggctccagcc ggccggggat gtgagtcatc ccttggtcca gcacatccac
1801 gctgtatacg ccacccaccc tgctagtgac ttagtagccg tcttggtgat cagatcaact
1861 atcccagcat cacagtgcct gtgcccaagt agtcctcact ttgcttaaca gtggccccag
1921 agagcaggag tagtgatgct ggtgattcgg atatgccaaa gagaagccac aaagtgcttc
1981 cttttaaatg aaaaggtgaa agttctcaac ttaaa
//