LOCUS AF268197 1883 bp mRNA linear VRT 30-DEC-2005
DEFINITION Danio rerio coxsackievirus and adenovirus receptor-like protein
(CAR) mRNA, complete cds.
ACCESSION AF268197
VERSION AF268197.1
KEYWORDS .
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 1883)
AUTHORS van Raaij,M.J., Chouin,E., van der Zandt,H., Bergelson,J.M. and
Cusack,S.
TITLE Dimeric structure of the coxsackievirus and adenovirus receptor D1
domain at 1.7 A resolution
JOURNAL Structure 8 (11), 1147-1155 (2000)
PUBMED 11080637
REMARK Erratum:[Structure Fold Des 2001 Jan 10;9(1):following R20]
REFERENCE 2 (bases 1 to 1883)
AUTHORS Bergelson,J.M.
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2000) Immunologic and Infectious Diseases,
Children's Hospital of Philadelphia, 3516 Civic Center Boulevard,
Philadelphia, PA 19104, USA
FEATURES Location/Qualifiers
source 1..1883
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
/note="derived from GenBank Accession Number AI545913"
gene 1..1883
/gene="CAR"
CDS 112..1230
/gene="CAR"
/codon_start=1
/product="coxsackievirus and adenovirus receptor-like
protein"
/protein_id="AAK58592.1"
/translation="MDMRTSFLCVTYVILLTGSACGLQITSTGQTSIEKASGESVKLD
CQFTLASDDSGPLDIEWSLQPSDNQKEEKVVIVYSGDRAFEHYYDPLKGRVHFNSPDP
KNGDASMNIMGLKATDTGTYQCKIKKVPGIASRKYLLTVMVRPSKPKCSAEGQTYVGK
NMVLKCSSVEGTQPMEYIWERTSGNKLLPPLAILDKVTGTMTLKNATGDASGTYRCQA
KNRVGTEECVVEVTITQPPNTAGIIAGVIICILLLLILLALILFCCCRARHKKKYEKE
IAYEIREDVPPPKSRVSTARSFTSVGSQRSSLGSMSPSNLHEYSKPQYDKIPSEEYDR
PPSHAPIPPPSRMAGPNLSRMGAIPVMIPAQNKDGSIV"
BASE COUNT 530 a 411 c 423 g 518 t
ORIGIN
1 cccacgcgtc cggcgcgaga aagaagagtg aacgcgaaac agcacaagtc tcgaggaaaa
61 gttgtttttt cactcgcacc gggtagcaaa ttgttgcttt aaagcagagg aatggatatg
121 aggacgtctt ttctctgcgt aacctatgtt attcttctca caggctcagc ctgtggacta
181 cagatcacct ctactggtca gacatccatt gagaaagcca gtggagagag tgtgaagctg
241 gactgtcaat ttactcttgc ttctgatgat tctgggcctt tggacattga gtggagcttg
301 cagccctccg acaaccagaa agaagagaaa gtggtgatcg tgtattctgg tgaccgggcc
361 tttgaacact actatgatcc tcttaaaggg agagttcact tcaactcgcc tgatcctaaa
421 aatggtgatg cctccatgaa catcatgggc ctgaaagcca cagacactgg gacttatcag
481 tgcaagatca agaaggttcc tggtattgct agcaggaagt acctgctaac cgttatggta
541 cgtccttcta aacccaaatg tagtgcagag ggtcaaactt acgtgggtaa gaatatggtg
601 ttgaagtgta gctctgtgga aggcacacaa cctatggagt acatctggga gagaacctct
661 ggcaataagc tattgcctcc attggcaatc ctggataaag tcacgggcac catgactctg
721 aagaatgcca ccggggatgc ttcagggaca tatcgatgcc aggcgaaaaa ccgcgttgga
781 acagaagagt gtgtggtaga ggtcactata acgcaaccac ctaatacagc tgggatcatt
841 gcaggagtaa taatctgcat tctgctgctt ctcattctcc tcgcccttat cctcttctgc
901 tgctgccgtg ctcgccacaa gaagaagtac gagaaggaaa tcgcctatga gatcagagag
961 gatgtgcctc ctccaaagag ccgtgtttcc accgcccgca gtttcaccag tgtgggcagc
1021 caacgctctt ctcttggctc catgtctcct tccaacctgc acgagtacag caagccccag
1081 tatgacaaga ttccctctga agagtacgac aggcccccta gccacgctcc cattcccccg
1141 cccagcagaa tggccggccc caacctcagc cgaatggggg ccatcccagt catgatccct
1201 gcccaaaaca aggatgggtc tattgtgtaa aactgaactg ggatctttct ctgcacattt
1261 tgacggtctc tgttcttatt catcatttta gcggattttg tgaaggagca aataggagga
1321 actcagctgt acggataatg caattcggct ggcagaactt caacaaacat taacacaaac
1381 tttattcaac aagatgcaga aagtgatttg tctgctcttg ttttgtaaat aatgcaacgc
1441 atgatgattt ttccccattt tgttttcttt aaagatagaa ggcccttttt ttaatgtaag
1501 gcacttgaat tggttgccta ttaagtgttc tccagagatg aattcaaatc attcaaatga
1561 aatgtatatg taatacaacc ccattttaga taaaaactct caagctattt gttaatgttt
1621 ttttaaacca gtttgaaata ttttctggca acttgaacca ttaatctatg aacattgttt
1681 tctttttaat tacttttttg ctggcaaaga tttactcaaa gggtctgtgg aaaatatgac
1741 gaatagcttt ggtttctgga tgttctcaaa aagataacat tagcgttgct tggattgaag
1801 aatatttacc tgtgatgtgg ggtgtgtgta tatacatgaa tatganatga tttatttgaa
1861 gatgagctaa aaaaaaaaaa aaa
//