LOCUS AF253515 6361 bp mRNA linear HUM 02-APR-2003
DEFINITION Homo sapiens BAF250b subunit mRNA, complete cds.
ACCESSION AF253515
VERSION AF253515.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6361)
AUTHORS Nie,Z., Yan,Z., Chen,E.H., Sechi,S., Ling,C., Zhou,S., Xue,Y.,
Yang,D., Murray,D., Kanakubo,E., Cleary,M.L. and Wang,W.
TITLE Novel SWI/SNF chromatin-remodeling complexes contain a
mixed-lineage leukemia chromosomal translocation partner
JOURNAL Mol. Cell. Biol. 23 (8), 2942-2952 (2003)
PUBMED 12665591
REFERENCE 2 (bases 1 to 6361)
AUTHORS Nie,Z., Kanakubo,A., Xue,Y. and Wang,W.
TITLE BAF250b, a novel subunit of human BAF complex is homologous to
Drosophila osa
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 6361)
AUTHORS Nie,Z., Kanakubo,A., Xue,Y. and Wang,W.
TITLE Direct Submission
JOURNAL Submitted (06-APR-2000) Lab of Genetics/ GRC, NIA/NIH, 333 Cassell
Dr. Triad Suite 4000, Baltimore, MD 21224, USA
FEATURES Location/Qualifiers
source 1..6361
/db_xref="H-InvDB:HIT000075102"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6q25.1-q26"
CDS 32..5905
/note="contains ARID DNA binding domain LXXLL motifs"
/codon_start=1
/product="BAF250b subunit"
/protein_id="AAN70985.1"
/translation="MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGG
GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG
PGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPE
YSSPSAAPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRS
HPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP
QRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQ
AQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGS
IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGS
PVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNP
QMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPA
YSGVPSASYSGQGPVWVSSANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSM
TPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMA
SSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADG
KEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSL
PAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQY
LFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEV
PGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGM
SMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLG
MGQRQQFPYGASYDRRHEPYGQQYPGQGPSSGQPPYGGHQPGLYPQQPNYKRHMDGMY
GPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI
QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRT
DDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLSNHISRAP
SPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGS
VEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAT
FNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDS
GKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDK
LPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRR
RPPPPLSSAGRKKEQEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSK
FPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPG
NDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLE
VLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVL
SPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMAL
LSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSV
DMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL"
BASE COUNT 1564 a 1838 c 1778 g 1180 t
ORIGIN
1 gaattccgcc gccgccgggg cccccggcag catggacccc ctgcagaact cccacgaagg
61 gtaccccaac agccagtgca accattatcc gggctacagc cggcccggcg cgggcggcgg
121 cggcggcggc ggcggcggag gaggaggagg cagcggagga ggaggaggag gaggaggagc
181 aggagcagga ggagcaggag cgggagctgt ggcggcggcg gccgcggcgg cggcggcagc
241 agcaggaggc ggcggcggcg gcggctatgg gggctcgtcc gcggggtacg gggtgctgag
301 ctccccccgg cagcagggcg gcggcatgat gatgggcccc gggggcggcg gggccgcgag
361 cctcagcaag gcggccgccg gctcggcggc ggggggcttc cagcgcttcg ccggccagaa
421 ccagcacccg tcgggggcca ccccgaccct caatcagctg ctcacctcgc ccagccccat
481 gatgcggagc tacggcggca gctaccccga gtacagcagc cccagcgcgg cgccgccgcc
541 gccgtcgcag ccccagtccc aggcggcggc ggcgggggcg gcggcgggcg gccagcaggc
601 ggccgcgggc atgggcttgg gcaaggacat gggcgcccag tacgccgctg ccagcccggc
661 ctgggcggcc gcgcaacaaa ggagtcaccc ggcgatgagc cccggcaccc ccggaccgac
721 catgggcaga tcccagggca gcccaatgga tccaatggtg atgaagagac ctcagttgta
781 tggcatgggc agtaaccctc attctcagcc tcagcagagc agtccgtacc caggaggttc
841 ctatggccct ccaggcccac agcggtatcc aattggcatc cagggtcgga ctcccggggc
901 catggccgga atgcagtacc ctcagcagca gatgccacct cagtatggnc agcaaggtgt
961 gagtggttac tgccagcagg gccaacagcc atattacagc cagcagccgc agcccccgca
1021 cctcccaccc caggcgcagt atctgccgtc ccagtcccag cagaggtacc agccgcagca
1081 ggacatgtct caggaaggct atggaactag atctcaacct cctctggccc ccggaaaacc
1141 taaccatgaa gacttgaact taatacagca agaaagacca tcaagtttac cagatctgtc
1201 tggctccatt gatgacctcc ccacgggaac ggaagcaact ttgagctcag cagtcagtgc
1261 atccgggtcc acgagcagcc aaggggatca gagcaacccg gcgcagtcgc ctttctcccc
1321 acatgcgtcc cctcatctct ccagcatccc ggggggccca tctccctctc ctgttgggtc
1381 tcctgtagga agcaaccagt ctcgatctgg cccaatctct cctgcaagta tcccaggtag
1441 tcagatgcct ccgcagccac ccgggagcca gtcagaatcc agttcccatc ccgccttgag
1501 ccagtcacca atgccacagg aaagaggttt tatggcaggc acacaaagaa accctcagat
1561 ggctcagtat ggacctcaac agacaggacc atccatgtcg cctcatcctt ctcctggggg
1621 ccagatgcat gctggaatca gtagctttca gcagagtaac tcaagtggga cttacggtcc
1681 acagatgagc cagtatggac cacaaggtaa ctactccaga cccccagcgt atagtggggt
1741 gcccagtgca agctacagcg gccagggccc ggtatgggta tcaagtgcca acaaccagat
1801 gcatggacaa gggccaagcc agccatgtgg tgctgtgccc ctgggacgaa tgccatcagc
1861 tgggatgcag aacagaccat ttcctggaaa tatgagcagc atgaccccca gttctcctgg
1921 catgtctcag cagggagggc caggaatggg gccgccaatg ccaactgtga accgtaaggc
1981 acaggaggca gccgcagcag tgatgcaggc tgctgcgaac tcagcacaaa gcaggcaagg
2041 cagtttcccc ggcatgaacc agagtggact tatggcttcc agctctccct acagccagcc
2101 catgaacaac agctctagcc tgatgaacac gcaggcgccg ccctacagca tggcgcccgc
2161 catggtgaac agctcggcag catctgtggg tcttgcagat atgatgtctc ctggtgaatc
2221 caaactgccc ctgcctctca aagcagacgg caaagaagaa ggcactccac agcccgagag
2281 caagtcaaag aagtccagct cctccaccac tactggggag aagatcacga aggtgtacga
2341 gctggggaat gagccagaga gaaagctctg ggtcgaccga tacctcacct tcatggaaga
2401 gagaggctct cctgtctcaa gtctgcctgc cgtgggcaag aagcccctgg acctgttccg
2461 actctacgtc tgcgtcaaag agatcggggg tttggcccag gttaataaaa acaagaagtg
2521 gcgtgagctg gcaaccaacc taaacgttgg cacctcaagc agtgcagcga gctccctgaa
2581 aaagcagtat attcagtacc tgtttgcctt tgagtgcaag atcgaacgtg gggaggagcc
2641 cccgccggaa gtcttcagca ccggggacac caaaaagcag cccaagctcc agccgccatc
2701 tcctgctaac tcgggatcct tgcaaggccc acagaccccc cagtcaactg gcagcaattc
2761 catggcagag gttccaggtg acctgaagcc acctacccca gcctccaccc ctcacggcca
2821 gatgactcca atgcaaggtg gaagaagcag tacaatcagt gtgcacgacc cattctcaga
2881 tgtgagtgat tcatccttcc cgaaacggaa ctccatgact ccaaacgccc cctaccagca
2941 gggcatgagc atgcccgatg tgatgggcag gatgccctat gagcccaaca aggacccctt
3001 tgggggaatg agaaaagtgc ctggaagcag cgagcccttt atgacgcaag gacagatgcc
3061 caacagcagc atgcaggaca tgtacaacca aagtccctcc ggagcaatgt ctaacctggg
3121 catggggcag cgccagcagt ttccctatgg agccagttac gaccgaaggc atgaacctta
3181 tgggcagcag tatccaggcc aaggcccttc ctcgggacag ccgccgtatg gagggcacca
3241 gcccggcctg tacccacagc agccgaatta caaacgccat atggacggca tgtacgggcc
3301 cccagccaag cgccacgagg gcgacatgta caacatgcag tacagcagcc agcagcagga
3361 gatgtacaac cagtatggag gctcctactc gggcccggac cgcaggccca tccagggcca
3421 gtacccgtat ccctacagca gggagaggat gcagggcccg gggcagatcc agacacacgg
3481 aatcccgcct cagatgatgg gcggcccgct gcagtcgtcc tccagtgagg ggcctcagca
3541 gaatatgtgg gcagcacgca atgatatgcc ttatccctac cagaacaggc agggccctgg
3601 cggccctaca caggcgcccc cttacccagg catgaaccgc acagacgata tgatggtacc
3661 cgatcagagg ataaatcatg agagccagtg gccttctcac gtcagccagc gtcagcctta
3721 tatgtcgtcc tcagcctcca tgcagcccat cacacgccca ccacagccgt cctaccagac
3781 gccaccgtca ctgtcaaatc acatctccag ggcgcccagc ccagcgtcct tccagcgctc
3841 cctggagaac cgcatgtctc caagcaagtc tccttttctg ccgtctatga agatgcagaa
3901 ggtcatgccc acggtcccca catcccaggt caccgggcca ccaccccaac cacccccaat
3961 cagaagggag atcacctttc ctcctggctc agtagaagca tcacaaccag tcttgaaaca
4021 aaggcgaaag attacctcca aagatatcgt tactcctgag gcgtggcgtg tgatgatgtc
4081 ccttaaatca ggtcttttgg ctgagagtac gtgggctttg gacactatta atattcttct
4141 gtatgatgac agcactgttg ctactttcaa tctctcccag ttgtctggat ttctcgaact
4201 tttagtcgag tactttagaa aatgcctgat tgacattttt ggaattctta tggaatatga
4261 agtgggagac cccagccaaa aagcacttga tcacaacgca gcaaggaagg atgacagcca
4321 gtccttggca gacgattctg ggaaagagga ggaagatgct gaatgtattg atgacgacga
4381 ggaagacgag gaggatgagg aggaagacag cgagaagaca gaaagcgatg aaaagagcag
4441 catcgctctg actgccccgg acgccgctgc agacccaaag gagaagccca agcaagccag
4501 taagttcgac aagctgccaa taaagatagt caaaaagaac aacctgtttg ttgttgaccg
4561 atctgacaag ttggggcgtg tgcaggagtt caatagtggc cttctgcact ggcagctcgg
4621 cgggggtgac accaccgagc acattcagac tcactttgag agcaagatgg aaattcctcc
4681 tcgcaggcgc ccacctcccc ccttaagctc cgcaggtaga aagaaagagc aagaaggcaa
4741 aggcgactct gaagagcagc aagagaaaag catcatagca accatcgatg acgtcctctc
4801 tgctcggcca ggggcattgc ctgaagacgc aaaccctggg ccccagaccg aaagcagtaa
4861 gtttcccttt ggtatccagc aagccaaaag tcaccggaac atcaagctgc tggaggacga
4921 gcccaggagc cgagacgaga ctcctctgtg taccatcgcg cactggcagg actcgctggc
4981 taagcgatgc atctgtgtgt ccaatattgt ccgtagcttg tcattcgtgc ctggcaatga
5041 tgccgaaatg tccaaacatc caggcctggt gctgatcctg gggaagctga ttcttcttca
5101 ccacgagcat ccagagagaa agcgagcacc gcagacctat gagaaagagg aggatgagga
5161 caagggggtg gcctgcagca aagatgagtg gtggtgggac tgcctcgagg tcttgaggga
5221 taacacgttg gtcacgttgg ccaacatttc cgggcagcta gacttgtctg cttacacgga
5281 aagcatctgc ttgccaattt tggatggctt gctgcactgg atggtgtgcc cgtctgcaga
5341 ggcacaagat ccctttccaa ctgtgggacc caactcggtc ctgtcgcctc agagacttgt
5401 gctggagacc ctctgtaaac tcagtatcca ggacaataat gtggacctga tcttggccac
5461 tcctccattt agtcgtcagg agaaattcta tgctacatta gttaggtacg ttggggatcg
5521 caaaaaccca gtctgtcgag aaatgtccat ggcgctttta tcgaaccttg cccaagggga
5581 cgcactagca gcaagggcca tagctgtgca gaaaggaagc attggaaact tgataagctt
5641 cctagaggat ggggtcacga tggcccagta ccagcagagc cagcacaacc tcatgcacat
5701 gcagcccccg cccctggaac cacctagcgt agacatgatg tgcagggcgg ccaaggcttt
5761 gctagccatg gccagagtgg acgaaaaccg ctcggaattc cttttgcacg agggccggtt
5821 gctggatatc tcgatatcag ctgtcctgaa ctctctggtt gcatctgtca tctgtgatgt
5881 actgtttcag attgggcagt tatgacataa gtgagaaggc aagcatgtgt gagtgaagat
5941 tagagggtca catataactg gctgttttct gttcttgttt atccagcgta ggaagaagga
6001 aaagaaaatc tttgctcctc tgccccattc actatttacc aattgggaat taaagaaata
6061 attaatttga acagttatga aattaatatt tgctgtctgt gtgtataagt acatcctttg
6121 gggttttttt ttttctcttt tttttaacca aagttgctgt ctagtgcatt caaaggtcac
6181 tttttgttct tcacagatct ttttaatgtt ctttcccatg ttgtattgca tttttggggg
6241 gaaggcaaat tgactttaaa aggaaaaaag ttgtgggcaa aaggatggct aaggtggcga
6301 aaattttcac cacactgagt tcaaaaaggt ggaaaattat cccttttccc atggcgtttt
6361 a
//