LOCUS AF242557 2227 bp mRNA linear HUM 02-APR-2001
DEFINITION Homo sapiens thymic stromal co-transporter mRNA, complete cds.
ACCESSION AF242557
VERSION AF242557.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2227)
AUTHORS Kim,M.G., Flomerfelt,F.A. III, Lee,K.N., Chen,C. and Schwartz,R.H.
TITLE A Putative 12 Transmembrane Domain Co-transporter Expressed in
Thymic Cortical Epithelial Cells
JOURNAL J. Immunol. (2000) In press
REFERENCE 2 (bases 1 to 2227)
AUTHORS Chen,C., Kim,M.G., Soo Lyu,M., Kozak,C.A., Schwartz,R.H. and
Flomerfelt,F.A.
TITLE Characterization of the mouse gene, human promoter and human cDNA
of TSCOT reveals strong interspecies homology
JOURNAL Biochim. Biophys. Acta 1493 (1-2), 159-169 (2000)
PUBMED 10978518
REFERENCE 3 (bases 1 to 2227)
AUTHORS Chen,C., Kim,M.G., Lyu,M.S., Kozak,C.A., Schwartz,R.H. and
Flomerfelt,F.A. III.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2000) LCMI, National Institutes of Health, 4
Center Drive, Bethesda, MD 20892, USA
FEATURES Location/Qualifiers
source 1..2227
/db_xref="H-InvDB:HIT000074855"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="9"
/map="9q27.8-q34.2"
/tissue_type="thymus"
CDS 233..1660
/note="TSCOT; TSO-1C12 ortholog"
/codon_start=1
/product="thymic stromal co-transporter"
/protein_id="AAK28343.1"
/translation="MSPEVTCPRRGHLPRFHPRTWVEPVVASSQVAASLYDAGLLLVV
KASYGTGGSSNHSASPSPRGALEDQQQRAISNFYIIYNLVVGLSPLLSAYGLGWLSDR
YHRKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGAAALNGLFGGFSAFWSGVMALG
SLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFKQMAGHSGQGLILTACSVSCASF
ALLYSLLVLKVPESVAKPSQELPAVDTVSGTVGTYRTLDPDQLDQQYAVGHPPSPGKA
KPHKTTIALLFVGAIIYDLAVVGTVDVIPLFVLREPLGWNQVQVGYGMAAGYTIFITS
FLGVLVFSRCFRDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIR
SAMSKLIKGSSYGKVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSF
LAIIPISIVAYKQVPLSPYGDIIEK"
BASE COUNT 459 a 656 c 612 g 500 t
ORIGIN
1 ctcgggaggt cactcggctg ctgggcgggc tgctgtcaca ggcgctgcgt gccctggctc
61 tgctcgccac tggccggcgc gctcccggcg cacggagcac actcgcgctc ccggcgcacg
121 gagcacactc gcgctccggg actgaaacct gagcagccgt agcagccgaa tttgggagca
181 tatccttgtc actgcagcca gaaagccctt cgatccccat cagagaggtc acatgagccc
241 cgaggtcacc tgcccgcgga ggggccacct gcctcgcttc cacccgagga cctgggttga
301 gcccgtggtg gcatcgtccc aggtggctgc ctccctctac gatgcggggc tactcctcgt
361 ggtgaaggcg tcctacggaa ccggaggctc ctccaaccac agtgccagcc catcgccccg
421 gggggctcta gaggaccaac agcagagagc catctccaat ttctacatta tctacaacct
481 tgtggtgggc ctgtcccccc tgctgtccgc ctacgggctg ggatggctca gcgaccgcta
541 ccaccgaaag atctccatct gcatgtcgct gctgggcttc ctgctctccc gcctcgggct
601 gctgctcaag gtgctgctgg actggccagt ggaggtgctg tacggggcgg cggcgctgaa
661 cgggctattc ggcggcttct ccgccttctg gtccggggtc atggcgctgg gatcgctggg
721 ctcctccgag ggccgccgct ctgtgcgcct catcctcatt gacctgatgc tgggcttggc
781 ggggttctgc gggagcatgg cttccgggca tctcttcaag cagatggctg ggcactctgg
841 gcagggcctg atactgacgg cctgcagcgt gagctgtgcc tcgtttgccc tgctctacag
901 ccttttggtg ctaaaggtcc ctgagtcggt ggccaaaccc agccaggagc tccccgccgt
961 ggataccgtg tctggcacgg ttggcacata ccgcactctg gatcctgatc agttggacca
1021 acagtatgca gtggggcacc ctccatctcc tggaaaagca aaaccccata aaaccaccat
1081 tgccttgctc tttgtgggtg ctatcatata tgacctggcg gtggtgggca cagtggacgt
1141 gatccctctt tttgtgctga gggagcctct cggttggaac caagtgcagg tgggctatgg
1201 tatggctgca gggtacacca tcttcatcac cagcttcctg ggtgtcctgg tcttctcccg
1261 ctgctttcgg gacaccacca tgatcatgat tgggatggtc tcctttgggt caggagccct
1321 cctcttggct tttgtgaaag agacatacat gttctatatt gctcgagccg tcatgctgtt
1381 tgctctcatc cccgtcacaa ccatccgatc agctatgtcc aaactcataa agggctcctc
1441 ttatggaaag gtgttcgtca tactgcagct gtccttggct ctgaccggcg tggtgacatc
1501 caccttgtac aacaagatct accagctcac catggacatg tttgtgggct cctgctttgc
1561 tctctcctcc tttctctcct tcctggccat cattccaatt agcatcgtgg cctataaaca
1621 agtcccattg tcaccatatg gagacatcat agagaaatga agatgcttac ctgcaggaac
1681 tgaaaacatc agccatggcc aggcccccag aagacaaaag aagggaccag ggaactggtg
1741 acctaagcaa cccactgctt aagaaacctg cgttccagcc agagttggcc tcagaatgac
1801 ctgctctggc tcagggatcc ctggtggatg gggaaaagca ctttcctggt gatggaaaaa
1861 cgttctcagc tttaagacac ccccattagg cagacactgg gttctgtgac agcagagcat
1921 gaccttaagg gttacaggga ggctgcacac agcagtccca ggccctgtga ggggcttcag
1981 actccagcta cagcgagcct gccccttttc ttcaagggac tgtcttgagg gctccaaagt
2041 atagctaact agtcacctgg gtgctgtgct gaaagtccca tgggagaact caaagcgtgc
2101 attatcacag cctgagggga atgtggaagg gatgttttgt aagaactacc aacagttttg
2161 cacgaacaat gtcttttaaa ttaaaataaa accttgaaaa aagtcaaaaa aaaaaaaaaa
2221 aaaaaaa
//